RNA–Protein interactions for RNA: ENST00000638203.1

KCNMA1-227, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-227ENST00000638203 DDRGK1Q96HY6 314 aa16.87■□□□□ 0.29
KCNMA1-227ENST00000638203 UPF2Q9HAU5 1272 aaKnown RBP16.87■□□□□ 0.29
KCNMA1-227ENST00000638203 WASHC2CQ9Y4E1 1318 aa16.86■□□□□ 0.29
KCNMA1-227ENST00000638203 MAGI2Q86UL8 1455 aa16.86■□□□□ 0.29
KCNMA1-227ENST00000638203 RNF123Q5XPI4 1314 aa16.86■□□□□ 0.29
KCNMA1-227ENST00000638203 PRDM15P57071 1507 aaPredicted RBP16.85■□□□□ 0.29
KCNMA1-227ENST00000638203 A2MP01023 1474 aa16.84■□□□□ 0.29
KCNMA1-227ENST00000638203 EFCAB2Q5VUJ9 269 aa16.84■□□□□ 0.29
KCNMA1-227ENST00000638203 TPRNQ4KMQ1 711 aa16.84■□□□□ 0.29
KCNMA1-227ENST00000638203 COG6Q9Y2V7 657 aa16.84■□□□□ 0.29
KCNMA1-227ENST00000638203 PLCH2O75038 1416 aa16.84■□□□□ 0.29
KCNMA1-227ENST00000638203 COL17A1Q9UMD9 1497 aaPredicted RBP16.83■□□□□ 0.28
KCNMA1-227ENST00000638203 UHRF1BP1LA0JNW5 1464 aa16.83■□□□□ 0.28
KCNMA1-227ENST00000638203 STK26Q9P289 416 aa16.83■□□□□ 0.28
KCNMA1-227ENST00000638203 BRPF3Q9ULD4 1205 aa16.82■□□□□ 0.28
KCNMA1-227ENST00000638203 PLA2R1Q13018 1463 aa16.82■□□□□ 0.28
KCNMA1-227ENST00000638203 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
KCNMA1-227ENST00000638203 PARD3Q8TEW0 1356 aa16.81■□□□□ 0.28
KCNMA1-227ENST00000638203 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
KCNMA1-227ENST00000638203 GGT6Q6P531 493 aa16.8■□□□□ 0.28
KCNMA1-227ENST00000638203 PDE3BQ13370 1112 aa16.8■□□□□ 0.28
KCNMA1-227ENST00000638203 ABCC1P33527 1531 aa16.8■□□□□ 0.28
KCNMA1-227ENST00000638203 INSRP06213 1382 aa16.8■□□□□ 0.28
KCNMA1-227ENST00000638203 FTSJ3Q8IY81 847 aaKnown RBP16.79■□□□□ 0.28
KCNMA1-227ENST00000638203 TRAK1Q9UPV9 953 aa16.79■□□□□ 0.28
KCNMA1-227ENST00000638203 ZMYM4Q5VZL5 1548 aa16.79■□□□□ 0.28
KCNMA1-227ENST00000638203 STAC3Q96MF2 364 aa16.79■□□□□ 0.28
KCNMA1-227ENST00000638203 ARAP3Q8WWN8 1544 aa16.79■□□□□ 0.28
KCNMA1-227ENST00000638203 BCAR3O75815 825 aa16.78■□□□□ 0.28
KCNMA1-227ENST00000638203 STAG3Q9UJ98 1225 aa16.78■□□□□ 0.28
KCNMA1-227ENST00000638203 KIF3BO15066 747 aa16.77■□□□□ 0.28
KCNMA1-227ENST00000638203 MORC1Q86VD1 984 aa16.77■□□□□ 0.28
KCNMA1-227ENST00000638203 PANK1Q8TE04 598 aa16.77■□□□□ 0.28
KCNMA1-227ENST00000638203 RNF17Q9BXT8 1623 aaKnown RBP16.77■□□□□ 0.28
KCNMA1-227ENST00000638203 RTEL1-TNFRSF6BF6WH68 1400 aa16.76■□□□□ 0.27
KCNMA1-227ENST00000638203 ERCC6L2Q5T890 1561 aa16.76■□□□□ 0.27
KCNMA1-227ENST00000638203 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
KCNMA1-227ENST00000638203 U2AF1L5P0DN76 240 aaPredicted RBP16.75■□□□□ 0.27
KCNMA1-227ENST00000638203 U2AF1Q01081 240 aaKnown RBP eCLIP16.75■□□□□ 0.27
KCNMA1-227ENST00000638203 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
KCNMA1-227ENST00000638203 SOX12O15370 315 aa16.74■□□□□ 0.27
KCNMA1-227ENST00000638203 NFKBIBQ15653 356 aa16.73■□□□□ 0.27
KCNMA1-227ENST00000638203 BACH2Q9BYV9 841 aa16.73■□□□□ 0.27
KCNMA1-227ENST00000638203 SPAG9O60271 1321 aaKnown RBP16.72■□□□□ 0.27
KCNMA1-227ENST00000638203 APBB1O00213 710 aa16.72■□□□□ 0.27
KCNMA1-227ENST00000638203 CDCA8Q53HL2 280 aa16.72■□□□□ 0.27
KCNMA1-227ENST00000638203 FRAT2O75474 233 aaPredicted RBP16.72■□□□□ 0.27
KCNMA1-227ENST00000638203 TESK2Q96S53 571 aa16.72■□□□□ 0.27
KCNMA1-227ENST00000638203 PER1O15534 1290 aaPredicted RBP16.72■□□□□ 0.27
KCNMA1-227ENST00000638203 CEP152O94986 1710 aa16.71■□□□□ 0.27
KCNMA1-227ENST00000638203 TRPM2O94759 1503 aa16.71■□□□□ 0.27
KCNMA1-227ENST00000638203 MFAP1P55081 439 aaKnown RBP16.71■□□□□ 0.27
KCNMA1-227ENST00000638203 BECN1Q14457 450 aa16.71■□□□□ 0.27
KCNMA1-227ENST00000638203 AFAP1Q8N556 730 aa16.7■□□□□ 0.26
KCNMA1-227ENST00000638203 SPHKAPQ2M3C7 1700 aa16.7■□□□□ 0.26
KCNMA1-227ENST00000638203 KANK1Q14678 1352 aa16.7■□□□□ 0.26
KCNMA1-227ENST00000638203 DISP3Q9P2K9 1392 aa16.7■□□□□ 0.26
KCNMA1-227ENST00000638203 ELL2O00472 640 aaPredicted RBP16.7■□□□□ 0.26
KCNMA1-227ENST00000638203 TRAPPC8Q9Y2L5 1435 aa16.69■□□□□ 0.26
KCNMA1-227ENST00000638203 MADDQ8WXG6 1647 aa16.69■□□□□ 0.26
KCNMA1-227ENST00000638203 TET3O43151 1660 aa16.69■□□□□ 0.26
KCNMA1-227ENST00000638203 IQGAP1P46940 1657 aa16.69■□□□□ 0.26
KCNMA1-227ENST00000638203 ZBTB7CA1YPR0 619 aa16.68■□□□□ 0.26
KCNMA1-227ENST00000638203 TMEM132EQ6IEE7 984 aa16.68■□□□□ 0.26
KCNMA1-227ENST00000638203 ZFYVE16Q7Z3T8 1539 aa16.68■□□□□ 0.26
KCNMA1-227ENST00000638203 DEPDC5O75140 1603 aa16.68■□□□□ 0.26
KCNMA1-227ENST00000638203 FAM161AQ3B820 660 aa16.67■□□□□ 0.26
KCNMA1-227ENST00000638203 CFAP70Q5T0N1 1121 aa16.67■□□□□ 0.26
KCNMA1-227ENST00000638203 SRPK2P78362 688 aaKnown RBP16.67■□□□□ 0.26
KCNMA1-227ENST00000638203 GSE1Q14687 1217 aa16.67■□□□□ 0.26
KCNMA1-227ENST00000638203 BLMP54132 1417 aaPredicted RBP16.67■□□□□ 0.26
KCNMA1-227ENST00000638203 NCLP19338 710 aaKnown RBP16.66■□□□□ 0.26
KCNMA1-227ENST00000638203 EIF3AQ14152 1382 aaKnown RBP16.66■□□□□ 0.26
KCNMA1-227ENST00000638203 SCAPERQ9BY12 1400 aa16.66■□□□□ 0.26
KCNMA1-227ENST00000638203 PPP2R1AP30153 589 aa16.66■□□□□ 0.26
KCNMA1-227ENST00000638203 CENPJQ9HC77 1338 aaPredicted RBP16.65■□□□□ 0.26
KCNMA1-227ENST00000638203 ITPRIPQ8IWB1 547 aa16.65■□□□□ 0.26
KCNMA1-227ENST00000638203 PTPRTO14522 1441 aa16.65■□□□□ 0.26
KCNMA1-227ENST00000638203 NEURL4Q96JN8 1562 aa16.65■□□□□ 0.26
KCNMA1-227ENST00000638203 KIAA1210Q9ULL0 1709 aa16.65■□□□□ 0.26
KCNMA1-227ENST00000638203 SCAF11Q99590 1463 aaKnown RBP16.65■□□□□ 0.26
KCNMA1-227ENST00000638203 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
KCNMA1-227ENST00000638203 SYNMO15061 1565 aa16.64■□□□□ 0.25
KCNMA1-227ENST00000638203 CENPQQ7L2Z9 268 aaPredicted RBP16.63■□□□□ 0.25
KCNMA1-227ENST00000638203 ATP7AQ04656 1500 aa16.63■□□□□ 0.25
KCNMA1-227ENST00000638203 NAP1L5Q96NT1 182 aaPredicted RBP16.62■□□□□ 0.25
KCNMA1-227ENST00000638203 WDR7Q9Y4E6 1490 aa16.62■□□□□ 0.25
KCNMA1-227ENST00000638203 INO80Q9ULG1 1556 aaPredicted RBP16.62■□□□□ 0.25
KCNMA1-227ENST00000638203 ABCA9Q8IUA7 1624 aa16.62■□□□□ 0.25
KCNMA1-227ENST00000638203 CLTCL1P53675 1640 aa16.61■□□□□ 0.25
KCNMA1-227ENST00000638203 MAPK8IP3Q9UPT6 1336 aa16.61■□□□□ 0.25
KCNMA1-227ENST00000638203 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
KCNMA1-227ENST00000638203 MLECQ14165 292 aa16.6■□□□□ 0.25
KCNMA1-227ENST00000638203 SMC4Q9NTJ3 1288 aa16.6■□□□□ 0.25
KCNMA1-227ENST00000638203 POGKQ9P215 609 aa16.6■□□□□ 0.25
KCNMA1-227ENST00000638203 VWDEQ8N2E2 1590 aa16.6■□□□□ 0.25
KCNMA1-227ENST00000638203 FANCAO15360 1455 aa16.59■□□□□ 0.25
KCNMA1-227ENST00000638203 GLIPR1L2Q4G1C9 344 aa16.59■□□□□ 0.25
KCNMA1-227ENST00000638203 NUTM2FA1L443 756 aa16.58■□□□□ 0.25
KCNMA1-227ENST00000638203 SLC12A5Q9H2X9 1139 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms