RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 GOLGA6L7A0A1B0GV03 622 aa21.86■■□□□ 1.09
CACNA1A-247ENST00000637769 NOL8Q76FK4 1167 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-247ENST00000637769 TXLNBQ8N3L3 684 aa21.85■■□□□ 1.09
CACNA1A-247ENST00000637769 RILPL2Q969X0 211 aa21.85■■□□□ 1.09
CACNA1A-247ENST00000637769 HSPA5P11021 654 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-247ENST00000637769 ANKRD18AQ8IVF6 992 aa21.85■■□□□ 1.09
CACNA1A-247ENST00000637769 KIF7Q2M1P5 1343 aa21.85■■□□□ 1.09
CACNA1A-247ENST00000637769 NAP1L1P55209 391 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-247ENST00000637769 XBP1P17861 261 aa21.84■■□□□ 1.09
CACNA1A-247ENST00000637769 OLFM4Q6UX06 510 aa21.84■■□□□ 1.09
CACNA1A-247ENST00000637769 LETM1O95202 739 aaPredicted RBP21.84■■□□□ 1.09
CACNA1A-247ENST00000637769 RSPH4AQ5TD94 716 aa21.83■■□□□ 1.09
CACNA1A-247ENST00000637769 C1orf141Q5JVX7 400 aa21.83■■□□□ 1.09
CACNA1A-247ENST00000637769 VPS37DQ86XT2 251 aa21.83■■□□□ 1.08
CACNA1A-247ENST00000637769 ERLIN2O94905 339 aa21.82■■□□□ 1.08
CACNA1A-247ENST00000637769 VPS8Q8N3P4 1428 aa21.82■■□□□ 1.08
CACNA1A-247ENST00000637769 HSP90AB2PQ58FF8 381 aa21.82■■□□□ 1.08
CACNA1A-247ENST00000637769 CCDC73Q6ZRK6 1079 aa21.82■■□□□ 1.08
CACNA1A-247ENST00000637769 BICD2Q8TD16 824 aa21.82■■□□□ 1.08
CACNA1A-247ENST00000637769 FAM43AQ8N2R8 423 aa21.82■■□□□ 1.08
CACNA1A-247ENST00000637769 OFD1O75665 1012 aa21.81■■□□□ 1.08
CACNA1A-247ENST00000637769 E9PSI1 815 aa21.81■■□□□ 1.08
CACNA1A-247ENST00000637769 VSIG10Q8N0Z9 540 aa21.81■■□□□ 1.08
CACNA1A-247ENST00000637769 LUC7LQ9NQ29 371 aaKnown RBP21.81■■□□□ 1.08
CACNA1A-247ENST00000637769 PKD2Q13563 968 aa21.81■■□□□ 1.08
CACNA1A-247ENST00000637769 INCENPQ9NQS7 918 aa21.81■■□□□ 1.08
CACNA1A-247ENST00000637769 NUP155O75694 1391 aa21.8■■□□□ 1.08
CACNA1A-247ENST00000637769 C9orf78Q9NZ63 289 aaPredicted RBP21.8■■□□□ 1.08
CACNA1A-247ENST00000637769 NGDNQ8NEJ9 315 aaKnown RBP21.79■■□□□ 1.08
CACNA1A-247ENST00000637769 WASHC2AQ641Q2 1341 aa21.79■■□□□ 1.08
CACNA1A-247ENST00000637769 CCDC9Q9Y3X0 531 aaKnown RBP21.79■■□□□ 1.08
CACNA1A-247ENST00000637769 GOLGA6L10A6NI86 522 aa21.79■■□□□ 1.08
CACNA1A-247ENST00000637769 ANKRD45Q5TZF3 282 aa21.79■■□□□ 1.08
CACNA1A-247ENST00000637769 DDX19BQ9UMR2 479 aa21.79■■□□□ 1.08
CACNA1A-247ENST00000637769 DDX58O95786 925 aaKnown RBP21.78■■□□□ 1.08
CACNA1A-247ENST00000637769 IFT57Q9NWB7 429 aa21.78■■□□□ 1.08
CACNA1A-247ENST00000637769 ZKSCAN2Q63HK3 967 aa21.78■■□□□ 1.08
CACNA1A-247ENST00000637769 SMARCE1Q969G3 411 aa21.77■■□□□ 1.08
CACNA1A-247ENST00000637769 APPP05067 770 aa21.77■■□□□ 1.08
CACNA1A-247ENST00000637769 PIP4K2AP48426 406 aaPredicted RBP21.77■■□□□ 1.08
CACNA1A-247ENST00000637769 MYBBP1AQ9BQG0 1328 aaKnown RBP21.77■■□□□ 1.08
CACNA1A-247ENST00000637769 LEKR1Q6ZMV7 388 aa21.77■■□□□ 1.08
CACNA1A-247ENST00000637769 CCDC39Q9UFE4 941 aa21.77■■□□□ 1.08
CACNA1A-247ENST00000637769 WWC2Q6AWC2 1192 aa21.77■■□□□ 1.08
CACNA1A-247ENST00000637769 NINLQ9Y2I6 1382 aa21.76■■□□□ 1.07
CACNA1A-247ENST00000637769 ERC2O15083 957 aa21.76■■□□□ 1.07
CACNA1A-247ENST00000637769 HSP90AB4PQ58FF6 505 aa21.76■■□□□ 1.07
CACNA1A-247ENST00000637769 HMGN5P82970 282 aaKnown RBP21.75■■□□□ 1.07
CACNA1A-247ENST00000637769 FOXD4L1Q9NU39 408 aa21.75■■□□□ 1.07
CACNA1A-247ENST00000637769 FAM13BQ9NYF5 915 aa21.75■■□□□ 1.07
CACNA1A-247ENST00000637769 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
CACNA1A-247ENST00000637769 TTC5Q8N0Z6 440 aa21.74■■□□□ 1.07
CACNA1A-247ENST00000637769 INTS3Q68E01 1043 aaKnown RBP21.74■■□□□ 1.07
CACNA1A-247ENST00000637769 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.74■■□□□ 1.07
CACNA1A-247ENST00000637769 CHMP5Q9NZZ3 219 aa21.73■■□□□ 1.07
CACNA1A-247ENST00000637769 CARMIL1Q5VZK9 1371 aa21.73■■□□□ 1.07
CACNA1A-247ENST00000637769 IFIT2P09913 472 aaKnown RBP21.73■■□□□ 1.07
CACNA1A-247ENST00000637769 NFXL1Q6ZNB6 911 aa21.73■■□□□ 1.07
CACNA1A-247ENST00000637769 FOXD4L5Q5VV16 416 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-247ENST00000637769 FOXD4L4Q8WXT5 416 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-247ENST00000637769 MLECQ14165 292 aa21.73■■□□□ 1.07
CACNA1A-247ENST00000637769 PDCP20941 246 aa21.72■■□□□ 1.07
CACNA1A-247ENST00000637769 CWC22Q9HCG8 908 aaKnown RBP21.72■■□□□ 1.07
CACNA1A-247ENST00000637769 GGT6Q6P531 493 aa21.72■■□□□ 1.07
CACNA1A-247ENST00000637769 EZRP15311 586 aaKnown RBP21.72■■□□□ 1.07
CACNA1A-247ENST00000637769 DHX16O60231 1041 aaKnown RBP21.72■■□□□ 1.07
CACNA1A-247ENST00000637769 ANO2Q9NQ90 1003 aa21.71■■□□□ 1.07
CACNA1A-247ENST00000637769 SMC3Q9UQE7 1217 aa21.71■■□□□ 1.07
CACNA1A-247ENST00000637769 CUX2O14529 1486 aa21.71■■□□□ 1.07
CACNA1A-247ENST00000637769 USP8P40818 1118 aa21.71■■□□□ 1.07
CACNA1A-247ENST00000637769 RABEP1Q15276 862 aa21.71■■□□□ 1.07
CACNA1A-247ENST00000637769 RALYLQ86SE5 291 aaKnown RBP21.71■■□□□ 1.07
CACNA1A-247ENST00000637769 FBXO3Q9UK99 471 aa21.71■■□□□ 1.07
CACNA1A-247ENST00000637769 ZBED9Q6R2W3 1325 aa21.7■■□□□ 1.06
CACNA1A-247ENST00000637769 TXLNAP40222 546 aa21.7■■□□□ 1.06
CACNA1A-247ENST00000637769 TEFQ10587 303 aa21.7■■□□□ 1.06
CACNA1A-247ENST00000637769 IQCEQ6IPM2 695 aa21.7■■□□□ 1.06
CACNA1A-247ENST00000637769 PSMA5P28066 241 aa21.7■■□□□ 1.06
CACNA1A-247ENST00000637769 ZFYVE27Q5T4F4 411 aa21.7■■□□□ 1.06
CACNA1A-247ENST00000637769 SMARCA2P51531 1590 aa21.69■■□□□ 1.06
CACNA1A-247ENST00000637769 MYO15BQ96JP2 1530 aa21.69■■□□□ 1.06
CACNA1A-247ENST00000637769 CLUAP1Q96AJ1 413 aa21.69■■□□□ 1.06
CACNA1A-247ENST00000637769 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
CACNA1A-247ENST00000637769 SYCP1Q15431 976 aa21.69■■□□□ 1.06
CACNA1A-247ENST00000637769 EFCAB2Q5VUJ9 269 aa21.69■■□□□ 1.06
CACNA1A-247ENST00000637769 CCDC144AA2RUR9 1427 aa21.68■■□□□ 1.06
CACNA1A-247ENST00000637769 SEPT7Q16181 437 aaKnown RBP21.68■■□□□ 1.06
CACNA1A-247ENST00000637769 CAVIN1Q6NZI2 390 aaKnown RBP21.68■■□□□ 1.06
CACNA1A-247ENST00000637769 MPHOSPH9Q99550 1183 aa21.68■■□□□ 1.06
CACNA1A-247ENST00000637769 KIAA0754O94854 1291 aa21.68■■□□□ 1.06
CACNA1A-247ENST00000637769 SART3Q15020 963 aaKnown RBP21.67■■□□□ 1.06
CACNA1A-247ENST00000637769 FILIP1LQ4L180 1135 aa21.67■■□□□ 1.06
CACNA1A-247ENST00000637769 EVC2Q86UK5 1308 aa21.67■■□□□ 1.06
CACNA1A-247ENST00000637769 NASPP49321 788 aaPredicted RBP21.65■■□□□ 1.06
CACNA1A-247ENST00000637769 MCM2P49736 904 aa21.65■■□□□ 1.06
CACNA1A-247ENST00000637769 COG3Q96JB2 828 aa21.65■■□□□ 1.06
CACNA1A-247ENST00000637769 RAB3GAP2Q9H2M9 1393 aa21.65■■□□□ 1.06
CACNA1A-247ENST00000637769 G3BP1Q13283 466 aaKnown RBP eCLIP21.65■■□□□ 1.06
CACNA1A-247ENST00000637769 PDE4AP27815 886 aa21.65■■□□□ 1.06
CACNA1A-247ENST00000637769 MBD3O95983 291 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms