RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 KIF15Q9NS87 1388 aa23.19■■□□□ 1.3
CACNA1A-246ENST00000637736 WASHC2CQ9Y4E1 1318 aa23.18■■□□□ 1.3
CACNA1A-246ENST00000637736 CCDC146Q8IYE0 955 aa23.18■■□□□ 1.3
CACNA1A-246ENST00000637736 MPHOSPH9Q99550 1183 aa23.18■■□□□ 1.3
CACNA1A-246ENST00000637736 MEX3CQ5U5Q3 659 aaKnown RBP23.18■■□□□ 1.3
CACNA1A-246ENST00000637736 DIAPH3Q9NSV4 1193 aa23.18■■□□□ 1.3
CACNA1A-246ENST00000637736 ROCK1Q13464 1354 aa23.17■■□□□ 1.3
CACNA1A-246ENST00000637736 NOM1Q5C9Z4 860 aaKnown RBP23.17■■□□□ 1.3
CACNA1A-246ENST00000637736 ERICH2A1L162 156 aa23.17■■□□□ 1.3
CACNA1A-246ENST00000637736 NFXL1Q6ZNB6 911 aa23.17■■□□□ 1.3
CACNA1A-246ENST00000637736 NLRP13Q86W25 1043 aa23.16■■□□□ 1.3
CACNA1A-246ENST00000637736 WWC2Q6AWC2 1192 aa23.16■■□□□ 1.3
CACNA1A-246ENST00000637736 CPLX1O14810 134 aa23.16■■□□□ 1.3
CACNA1A-246ENST00000637736 RDXP35241 583 aaKnown RBP23.16■■□□□ 1.3
CACNA1A-246ENST00000637736 FOXD1Q16676 465 aa23.16■■□□□ 1.3
CACNA1A-246ENST00000637736 VPS8Q8N3P4 1428 aa23.16■■□□□ 1.3
CACNA1A-246ENST00000637736 TTC5Q8N0Z6 440 aa23.16■■□□□ 1.3
CACNA1A-246ENST00000637736 CCDC191Q8NCU4 936 aa23.16■■□□□ 1.3
CACNA1A-246ENST00000637736 NUTM2FA1L443 756 aa23.15■■□□□ 1.3
CACNA1A-246ENST00000637736 CCDC173Q0VFZ6 552 aa23.15■■□□□ 1.3
CACNA1A-246ENST00000637736 DCAF8L1A6NGE4 600 aa23.15■■□□□ 1.3
CACNA1A-246ENST00000637736 TRDNQ13061 729 aa23.14■■□□□ 1.3
CACNA1A-246ENST00000637736 RSPH4AQ5TD94 716 aa23.14■■□□□ 1.3
CACNA1A-246ENST00000637736 TMEM132AQ24JP5 1023 aa23.14■■□□□ 1.29
CACNA1A-246ENST00000637736 C9orf78Q9NZ63 289 aaPredicted RBP23.14■■□□□ 1.29
CACNA1A-246ENST00000637736 ANKRD45Q5TZF3 282 aa23.14■■□□□ 1.29
CACNA1A-246ENST00000637736 ZKSCAN1P17029 563 aaPredicted RBP23.13■■□□□ 1.29
CACNA1A-246ENST00000637736 REC8O95072 547 aa23.13■■□□□ 1.29
CACNA1A-246ENST00000637736 PDS5BQ9NTI5 1447 aa23.13■■□□□ 1.29
CACNA1A-246ENST00000637736 CGNL1Q0VF96 1302 aa23.12■■□□□ 1.29
CACNA1A-246ENST00000637736 KIF3BO15066 747 aa23.12■■□□□ 1.29
CACNA1A-246ENST00000637736 SYTL4Q96C24 671 aaPredicted RBP23.12■■□□□ 1.29
CACNA1A-246ENST00000637736 DCTN1Q14203 1278 aa23.11■■□□□ 1.29
CACNA1A-246ENST00000637736 CENPQQ7L2Z9 268 aaPredicted RBP23.11■■□□□ 1.29
CACNA1A-246ENST00000637736 ACBD3Q9H3P7 528 aa23.11■■□□□ 1.29
CACNA1A-246ENST00000637736 RNF20Q5VTR2 975 aa23.11■■□□□ 1.29
CACNA1A-246ENST00000637736 TEFQ10587 303 aa23.1■■□□□ 1.29
CACNA1A-246ENST00000637736 BICD2Q8TD16 824 aa23.1■■□□□ 1.29
CACNA1A-246ENST00000637736 COG3Q96JB2 828 aa23.1■■□□□ 1.29
CACNA1A-246ENST00000637736 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
CACNA1A-246ENST00000637736 OFD1O75665 1012 aa23.1■■□□□ 1.29
CACNA1A-246ENST00000637736 ANO2Q9NQ90 1003 aa23.09■■□□□ 1.29
CACNA1A-246ENST00000637736 SKIDA1Q1XH10 827 aa23.09■■□□□ 1.29
CACNA1A-246ENST00000637736 MYO6Q9UM54 1294 aa23.08■■□□□ 1.29
CACNA1A-246ENST00000637736 RAB3GAP2Q9H2M9 1393 aa23.08■■□□□ 1.29
CACNA1A-246ENST00000637736 ZRSR2Q15696 482 aaKnown RBP23.07■■□□□ 1.28
CACNA1A-246ENST00000637736 DDX58O95786 925 aaKnown RBP23.07■■□□□ 1.28
CACNA1A-246ENST00000637736 CAGE1Q8TC20 777 aa23.07■■□□□ 1.28
CACNA1A-246ENST00000637736 HSP90B2PQ58FF3 399 aa23.06■■□□□ 1.28
CACNA1A-246ENST00000637736 BCL11BQ9C0K0 894 aaPredicted RBP23.06■■□□□ 1.28
CACNA1A-246ENST00000637736 FOSBP53539 338 aa23.06■■□□□ 1.28
CACNA1A-246ENST00000637736 PLCD4Q9BRC7 762 aa23.06■■□□□ 1.28
CACNA1A-246ENST00000637736 RSPH6AQ9H0K4 717 aa23.06■■□□□ 1.28
CACNA1A-246ENST00000637736 CCDC144AA2RUR9 1427 aa23.06■■□□□ 1.28
CACNA1A-246ENST00000637736 CCAR1Q8IX12 1150 aaKnown RBP23.06■■□□□ 1.28
CACNA1A-246ENST00000637736 VSIG10Q8N0Z9 540 aa23.06■■□□□ 1.28
CACNA1A-246ENST00000637736 SASS6Q6UVJ0 657 aa23.06■■□□□ 1.28
CACNA1A-246ENST00000637736 EVC2Q86UK5 1308 aa23.05■■□□□ 1.28
CACNA1A-246ENST00000637736 H0YHG0 523 aa23.05■■□□□ 1.28
CACNA1A-246ENST00000637736 RBM33Q96EV2 1170 aaKnown RBP23.05■■□□□ 1.28
CACNA1A-246ENST00000637736 NEFHP12036 1026 aa23.04■■□□□ 1.28
CACNA1A-246ENST00000637736 NUTM2DQ5VT03 806 aaPredicted RBP23.04■■□□□ 1.28
CACNA1A-246ENST00000637736 ABCC8Q09428 1581 aa23.03■■□□□ 1.28
CACNA1A-246ENST00000637736 IKQ13123 557 aaPredicted RBP23.03■■□□□ 1.28
CACNA1A-246ENST00000637736 SAFBQ15424 915 aaKnown RBP eCLIP23.03■■□□□ 1.28
CACNA1A-246ENST00000637736 ARGLU1Q9NWB6 273 aaPredicted RBP23.03■■□□□ 1.28
CACNA1A-246ENST00000637736 IFIT2P09913 472 aaKnown RBP23.03■■□□□ 1.28
CACNA1A-246ENST00000637736 FYB1O15117 783 aa23.03■■□□□ 1.28
CACNA1A-246ENST00000637736 MNS1Q8NEH6 495 aa23.03■■□□□ 1.28
CACNA1A-246ENST00000637736 MYBBP1AQ9BQG0 1328 aaKnown RBP23.02■■□□□ 1.28
CACNA1A-246ENST00000637736 FAM161AQ3B820 660 aa23.02■■□□□ 1.28
CACNA1A-246ENST00000637736 E9PSI1 815 aa23.01■■□□□ 1.27
CACNA1A-246ENST00000637736 ZKSCAN2Q63HK3 967 aa23.01■■□□□ 1.27
CACNA1A-246ENST00000637736 EIF2S2P20042 333 aaKnown RBP23.01■■□□□ 1.27
CACNA1A-246ENST00000637736 BRMS1Q9HCU9 246 aa23.01■■□□□ 1.27
CACNA1A-246ENST00000637736 TTLL5Q6EMB2 1281 aa23■■□□□ 1.27
CACNA1A-246ENST00000637736 SOGA1O94964 1423 aa23■■□□□ 1.27
CACNA1A-246ENST00000637736 FAM13BQ9NYF5 915 aa23■■□□□ 1.27
CACNA1A-246ENST00000637736 PDILTQ8N807 584 aa22.99■■□□□ 1.27
CACNA1A-246ENST00000637736 WASHC2AQ641Q2 1341 aa22.99■■□□□ 1.27
CACNA1A-246ENST00000637736 IFT57Q9NWB7 429 aa22.98■■□□□ 1.27
CACNA1A-246ENST00000637736 CCDC27Q2M243 656 aa22.98■■□□□ 1.27
CACNA1A-246ENST00000637736 ELL2O00472 640 aaPredicted RBP22.98■■□□□ 1.27
CACNA1A-246ENST00000637736 ANKRD62A6NC57 917 aa22.98■■□□□ 1.27
CACNA1A-246ENST00000637736 OLFM4Q6UX06 510 aa22.98■■□□□ 1.27
CACNA1A-246ENST00000637736 NAT10Q9H0A0 1025 aaKnown RBP22.97■■□□□ 1.27
CACNA1A-246ENST00000637736 MTMR7Q9Y216 660 aa22.97■■□□□ 1.27
CACNA1A-246ENST00000637736 RRP7AQ9Y3A4 280 aaKnown RBP22.96■■□□□ 1.27
CACNA1A-246ENST00000637736 SYCP1Q15431 976 aa22.96■■□□□ 1.27
CACNA1A-246ENST00000637736 SEPT7Q16181 437 aaKnown RBP22.96■■□□□ 1.27
CACNA1A-246ENST00000637736 NECTIN2Q92692 538 aa22.96■■□□□ 1.27
CACNA1A-246ENST00000637736 CCDC97Q96F63 343 aaPredicted RBP22.95■■□□□ 1.27
CACNA1A-246ENST00000637736 XBP1P17861 261 aa22.95■■□□□ 1.26
CACNA1A-246ENST00000637736 TRAK1Q9UPV9 953 aa22.95■■□□□ 1.26
CACNA1A-246ENST00000637736 G3BP1Q13283 466 aaKnown RBP eCLIP22.95■■□□□ 1.26
CACNA1A-246ENST00000637736 DDX19BQ9UMR2 479 aa22.94■■□□□ 1.26
CACNA1A-246ENST00000637736 VPS37CA5D8V6 355 aaPredicted RBP22.93■■□□□ 1.26
CACNA1A-246ENST00000637736 HNRNPMP52272 730 aaKnown RBP eCLIP22.93■■□□□ 1.26
CACNA1A-246ENST00000637736 SLC4A3P48751 1232 aa22.93■■□□□ 1.26
CACNA1A-246ENST00000637736 ERC2O15083 957 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 443.6 ms