RNA–Protein interactions for RNA: ENST00000637328.1

LINC01548-202, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 1 (best)

Gene LINC01548, Length 454 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-202ENST00000637328 FAM135BQ49AJ0 1406 aa16.89■□□□□ 0.29
LINC01548-202ENST00000637328 E9PCH4 1651 aa16.88■□□□□ 0.29
LINC01548-202ENST00000637328 RPRD2Q5VT52 1461 aaKnown RBP16.88■□□□□ 0.29
LINC01548-202ENST00000637328 THEMISQ8N1K5 641 aaPredicted RBP16.88■□□□□ 0.29
LINC01548-202ENST00000637328 TNRQ92752 1358 aa16.88■□□□□ 0.29
LINC01548-202ENST00000637328 CCDC144AA2RUR9 1427 aa16.86■□□□□ 0.29
LINC01548-202ENST00000637328 FBXO31Q5XUX0 539 aaPredicted RBP16.85■□□□□ 0.29
LINC01548-202ENST00000637328 IQGAP1P46940 1657 aa16.85■□□□□ 0.29
LINC01548-202ENST00000637328 ZC3H13Q5T200 1668 aaKnown RBP16.85■□□□□ 0.29
LINC01548-202ENST00000637328 ARHGAP31Q2M1Z3 1444 aa16.84■□□□□ 0.29
LINC01548-202ENST00000637328 L3MBTL2Q969R5 705 aa16.83■□□□□ 0.28
LINC01548-202ENST00000637328 TRPM2O94759 1503 aa16.82■□□□□ 0.28
LINC01548-202ENST00000637328 PPP1R15AO75807 674 aaPredicted RBP16.81■□□□□ 0.28
LINC01548-202ENST00000637328 UGGT1Q9NYU2 1555 aa16.8■□□□□ 0.28
LINC01548-202ENST00000637328 SPHKAPQ2M3C7 1700 aa16.79■□□□□ 0.28
LINC01548-202ENST00000637328 RGL3Q3MIN7 710 aa16.78■□□□□ 0.28
LINC01548-202ENST00000637328 NOS1P29475 1434 aa16.78■□□□□ 0.28
LINC01548-202ENST00000637328 ZNF772Q68DY9 489 aaPredicted RBP16.77■□□□□ 0.28
LINC01548-202ENST00000637328 NLRP1Q9C000 1473 aa16.77■□□□□ 0.28
LINC01548-202ENST00000637328 XIRP1Q702N8 1843 aaKnown RBP16.76■□□□□ 0.27
LINC01548-202ENST00000637328 CLTCL1P53675 1640 aa16.76■□□□□ 0.27
LINC01548-202ENST00000637328 JCADQ9P266 1359 aa16.75■□□□□ 0.27
LINC01548-202ENST00000637328 ROBO1Q9Y6N7 1651 aa16.75■□□□□ 0.27
LINC01548-202ENST00000637328 ERVK-7P63135 1459 aa16.74■□□□□ 0.27
LINC01548-202ENST00000637328 SPATA31E1Q6ZUB1 1445 aa16.73■□□□□ 0.27
LINC01548-202ENST00000637328 CHGAP10645 457 aaKnown RBP16.73■□□□□ 0.27
LINC01548-202ENST00000637328 DCAF11Q8TEB1 546 aa16.73■□□□□ 0.27
LINC01548-202ENST00000637328 SLC52A1Q9NWF4 448 aa16.73■□□□□ 0.27
LINC01548-202ENST00000637328 KDM2AQ9Y2K7 1162 aa16.73■□□□□ 0.27
LINC01548-202ENST00000637328 RXRBP28702 533 aa16.72■□□□□ 0.27
LINC01548-202ENST00000637328 IDI1Q13907 227 aa16.72■□□□□ 0.27
LINC01548-202ENST00000637328 CFAP65Q6ZU64 1925 aaKnown RBP16.72■□□□□ 0.27
LINC01548-202ENST00000637328 CDK12Q9NYV4 1490 aaPredicted RBP16.7■□□□□ 0.26
LINC01548-202ENST00000637328 NBPF8Q3BBV2 869 aa16.69■□□□□ 0.26
LINC01548-202ENST00000637328 ZNF326Q5BKZ1 582 aaKnown RBP16.69■□□□□ 0.26
LINC01548-202ENST00000637328 LRP6O75581 1613 aa16.68■□□□□ 0.26
LINC01548-202ENST00000637328 MEX3CQ5U5Q3 659 aaKnown RBP16.68■□□□□ 0.26
LINC01548-202ENST00000637328 PIK3C2BO00750 1634 aa16.67■□□□□ 0.26
LINC01548-202ENST00000637328 TMEM94Q12767 1356 aa16.66■□□□□ 0.26
LINC01548-202ENST00000637328 SPATA31A6Q5VVP1 1343 aa16.65■□□□□ 0.26
LINC01548-202ENST00000637328 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
LINC01548-202ENST00000637328 PHLPP1O60346 1717 aa16.65■□□□□ 0.26
LINC01548-202ENST00000637328 ZRANB1Q9UGI0 708 aa16.64■□□□□ 0.25
LINC01548-202ENST00000637328 STAG3Q9UJ98 1225 aa16.64■□□□□ 0.25
LINC01548-202ENST00000637328 KIF1BO60333 1816 aa16.63■□□□□ 0.25
LINC01548-202ENST00000637328 SCAF11Q99590 1463 aaKnown RBP16.63■□□□□ 0.25
LINC01548-202ENST00000637328 STAC3Q96MF2 364 aa16.62■□□□□ 0.25
LINC01548-202ENST00000637328 RPGRIP1LQ68CZ1 1315 aa16.62■□□□□ 0.25
LINC01548-202ENST00000637328 SETBP1Q9Y6X0 1596 aa16.61■□□□□ 0.25
LINC01548-202ENST00000637328 LTKP29376 864 aa16.61■□□□□ 0.25
LINC01548-202ENST00000637328 PRAG1Q86YV5 1406 aa16.61■□□□□ 0.25
LINC01548-202ENST00000637328 EP400Q96L91 3159 aa16.6■□□□□ 0.25
LINC01548-202ENST00000637328 SLAIN2Q9P270 581 aa16.59■□□□□ 0.25
LINC01548-202ENST00000637328 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
LINC01548-202ENST00000637328 COL16A1Q07092 1604 aaPredicted RBP16.59■□□□□ 0.25
LINC01548-202ENST00000637328 TXNDC2Q86VQ3 553 aa16.58■□□□□ 0.24
LINC01548-202ENST00000637328 RBM33Q96EV2 1170 aaKnown RBP16.58■□□□□ 0.24
LINC01548-202ENST00000637328 ADGRF5Q8IZF2 1346 aa16.57■□□□□ 0.24
LINC01548-202ENST00000637328 ZNF316A6NFI3 1004 aaPredicted RBP16.57■□□□□ 0.24
LINC01548-202ENST00000637328 NUTM2DQ5VT03 806 aaPredicted RBP16.57■□□□□ 0.24
LINC01548-202ENST00000637328 RGS12O14924 1447 aa16.56■□□□□ 0.24
LINC01548-202ENST00000637328 PROSER2Q86WR7 435 aaPredicted RBP16.56■□□□□ 0.24
LINC01548-202ENST00000637328 MYOM2P54296 1465 aa16.55■□□□□ 0.24
LINC01548-202ENST00000637328 RALGAPBQ86X10 1494 aa16.55■□□□□ 0.24
LINC01548-202ENST00000637328 VGFO15240 615 aaPredicted RBP16.55■□□□□ 0.24
LINC01548-202ENST00000637328 KCNA6P17658 529 aa16.55■□□□□ 0.24
LINC01548-202ENST00000637328 ARHGAP23Q9P227 1491 aa16.54■□□□□ 0.24
LINC01548-202ENST00000637328 NUTM2BA6NNL0 878 aaPredicted RBP16.54■□□□□ 0.24
LINC01548-202ENST00000637328 NUTM2EB1AL46 878 aaPredicted RBP16.54■□□□□ 0.24
LINC01548-202ENST00000637328 NUTM2AQ8IVF1 878 aaPredicted RBP16.54■□□□□ 0.24
LINC01548-202ENST00000637328 NEXMIFQ5QGS0 1516 aa16.54■□□□□ 0.24
LINC01548-202ENST00000637328 ROCK2O75116 1388 aaKnown RBP16.53■□□□□ 0.24
LINC01548-202ENST00000637328 NBPF1Q3BBV0 1214 aa16.53■□□□□ 0.24
LINC01548-202ENST00000637328 CARD11Q9BXL7 1154 aa16.53■□□□□ 0.24
LINC01548-202ENST00000637328 SLIT1O75093 1534 aa16.53■□□□□ 0.24
LINC01548-202ENST00000637328 UBR1Q8IWV7 1749 aa16.53■□□□□ 0.24
LINC01548-202ENST00000637328 MSH6P52701 1360 aa16.52■□□□□ 0.24
LINC01548-202ENST00000637328 AFF2P51816 1311 aa16.52■□□□□ 0.24
LINC01548-202ENST00000637328 EIF4G2P78344 907 aaKnown RBP eCLIP16.52■□□□□ 0.24
LINC01548-202ENST00000637328 IFT172Q9UG01 1749 aa16.52■□□□□ 0.24
LINC01548-202ENST00000637328 RIMS2Q9UQ26 1411 aa16.52■□□□□ 0.23
LINC01548-202ENST00000637328 NRXN1Q9ULB1 1477 aa16.51■□□□□ 0.23
LINC01548-202ENST00000637328 HSPA5P11021 654 aaKnown RBP16.51■□□□□ 0.23
LINC01548-202ENST00000637328 CFAP70Q5T0N1 1121 aa16.51■□□□□ 0.23
LINC01548-202ENST00000637328 HIRIP3Q9BW71 556 aaPredicted RBP16.51■□□□□ 0.23
LINC01548-202ENST00000637328 EID1Q9Y6B2 187 aa16.51■□□□□ 0.23
LINC01548-202ENST00000637328 PPLO60437 1756 aa16.51■□□□□ 0.23
LINC01548-202ENST00000637328 MYO5BQ9ULV0 1848 aa16.5■□□□□ 0.23
LINC01548-202ENST00000637328 RBM6P78332 1123 aaKnown RBP16.5■□□□□ 0.23
LINC01548-202ENST00000637328 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC01548-202ENST00000637328 ZFYVE9O95405 1425 aa16.5■□□□□ 0.23
LINC01548-202ENST00000637328 ATAD2Q6PL18 1390 aa16.5■□□□□ 0.23
LINC01548-202ENST00000637328 SHPRHQ149N8 1683 aa16.5■□□□□ 0.23
LINC01548-202ENST00000637328 TRPM1Q7Z4N2 1603 aa16.49■□□□□ 0.23
LINC01548-202ENST00000637328 HDGFP51858 240 aaKnown RBP16.49■□□□□ 0.23
LINC01548-202ENST00000637328 PIK3C2GO75747 1445 aa16.48■□□□□ 0.23
LINC01548-202ENST00000637328 GPRASP1Q5JY77 1395 aa16.48■□□□□ 0.23
LINC01548-202ENST00000637328 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
LINC01548-202ENST00000637328 C14orf93Q9H972 538 aaKnown RBP16.47■□□□□ 0.23
LINC01548-202ENST00000637328 QTRT2Q9H974 415 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms