RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 STAC3Q96MF2 364 aa17.42■□□□□ 0.38
BRF1-222ENST00000635152 TET3O43151 1660 aa17.41■□□□□ 0.38
BRF1-222ENST00000635152 DEPDC5O75140 1603 aa17.41■□□□□ 0.38
BRF1-222ENST00000635152 PLIN1O60240 522 aa17.4■□□□□ 0.38
BRF1-222ENST00000635152 WDR43Q15061 677 aaKnown RBP eCLIP17.39■□□□□ 0.37
BRF1-222ENST00000635152 CEP152O94986 1710 aa17.39■□□□□ 0.37
BRF1-222ENST00000635152 EIF3AQ14152 1382 aaKnown RBP17.38■□□□□ 0.37
BRF1-222ENST00000635152 ERICH6Q7L0X2 663 aa17.38■□□□□ 0.37
BRF1-222ENST00000635152 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
BRF1-222ENST00000635152 IQGAP1P46940 1657 aa17.37■□□□□ 0.37
BRF1-222ENST00000635152 VWDEQ8N2E2 1590 aa17.37■□□□□ 0.37
BRF1-222ENST00000635152 BLMP54132 1417 aaPredicted RBP17.36■□□□□ 0.37
BRF1-222ENST00000635152 MROH1Q8NDA8 1641 aa17.35■□□□□ 0.37
BRF1-222ENST00000635152 CD109Q6YHK3 1445 aa17.34■□□□□ 0.37
BRF1-222ENST00000635152 ZNF518AQ6AHZ1 1483 aa17.33■□□□□ 0.37
BRF1-222ENST00000635152 CCDC146Q8IYE0 955 aa17.33■□□□□ 0.36
BRF1-222ENST00000635152 TRAK1Q9UPV9 953 aa17.33■□□□□ 0.36
BRF1-222ENST00000635152 KIDINS220Q9ULH0 1771 aa17.32■□□□□ 0.36
BRF1-222ENST00000635152 NUTM2DQ5VT03 806 aaPredicted RBP17.32■□□□□ 0.36
BRF1-222ENST00000635152 RAPGEF3O95398 923 aa17.31■□□□□ 0.36
BRF1-222ENST00000635152 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
BRF1-222ENST00000635152 NOS1P29475 1434 aa17.31■□□□□ 0.36
BRF1-222ENST00000635152 PRKCSHP14314 528 aaPredicted RBP17.3■□□□□ 0.36
BRF1-222ENST00000635152 TMEM132EQ6IEE7 984 aa17.3■□□□□ 0.36
BRF1-222ENST00000635152 EFCAB6Q5THR3 1501 aa17.3■□□□□ 0.36
BRF1-222ENST00000635152 ASXL1Q8IXJ9 1541 aa17.3■□□□□ 0.36
BRF1-222ENST00000635152 CFAP65Q6ZU64 1925 aaKnown RBP17.3■□□□□ 0.36
BRF1-222ENST00000635152 PLEKHH1Q9ULM0 1364 aa17.3■□□□□ 0.36
BRF1-222ENST00000635152 CARD14Q9BXL6 1004 aa17.3■□□□□ 0.36
BRF1-222ENST00000635152 SYNMO15061 1565 aa17.3■□□□□ 0.36
BRF1-222ENST00000635152 PPRC1Q5VV67 1664 aaKnown RBP17.29■□□□□ 0.36
BRF1-222ENST00000635152 MAP3K4Q9Y6R4 1608 aa17.29■□□□□ 0.36
BRF1-222ENST00000635152 ABCA6Q8N139 1617 aa17.28■□□□□ 0.36
BRF1-222ENST00000635152 ERVK-7P63135 1459 aa17.28■□□□□ 0.36
BRF1-222ENST00000635152 INSRP06213 1382 aa17.28■□□□□ 0.36
BRF1-222ENST00000635152 CRBNQ96SW2 442 aa17.27■□□□□ 0.36
BRF1-222ENST00000635152 NPATQ14207 1427 aa17.27■□□□□ 0.36
BRF1-222ENST00000635152 MYOM2P54296 1465 aa17.27■□□□□ 0.36
BRF1-222ENST00000635152 C20orf194Q5TEA3 1177 aa17.26■□□□□ 0.35
BRF1-222ENST00000635152 ZMYM4Q5VZL5 1548 aa17.26■□□□□ 0.35
BRF1-222ENST00000635152 CENPJQ9HC77 1338 aaPredicted RBP17.26■□□□□ 0.35
BRF1-222ENST00000635152 POGZQ7Z3K3 1410 aa17.26■□□□□ 0.35
BRF1-222ENST00000635152 TNNT2P45379 298 aaPredicted RBP17.26■□□□□ 0.35
BRF1-222ENST00000635152 KIF1BO60333 1816 aa17.25■□□□□ 0.35
BRF1-222ENST00000635152 APAF1O14727 1248 aa17.25■□□□□ 0.35
BRF1-222ENST00000635152 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
BRF1-222ENST00000635152 DUSP27Q5VZP5 1158 aa17.25■□□□□ 0.35
BRF1-222ENST00000635152 MROH2AA6NES4 1674 aa17.24■□□□□ 0.35
BRF1-222ENST00000635152 MYOM1P52179 1685 aa17.24■□□□□ 0.35
BRF1-222ENST00000635152 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
BRF1-222ENST00000635152 SLC12A5Q9H2X9 1139 aa17.24■□□□□ 0.35
BRF1-222ENST00000635152 SKAP1Q86WV1 359 aa17.23■□□□□ 0.35
BRF1-222ENST00000635152 KDM5AP29375 1690 aaKnown RBP17.23■□□□□ 0.35
BRF1-222ENST00000635152 PIK3C2GO75747 1445 aa17.23■□□□□ 0.35
BRF1-222ENST00000635152 KIAA1210Q9ULL0 1709 aa17.22■□□□□ 0.35
BRF1-222ENST00000635152 NPC1L1Q9UHC9 1359 aa17.22■□□□□ 0.35
BRF1-222ENST00000635152 C14orf93Q9H972 538 aaKnown RBP17.22■□□□□ 0.35
BRF1-222ENST00000635152 FRMPD1Q5SYB0 1578 aa17.21■□□□□ 0.35
BRF1-222ENST00000635152 LMTK2Q8IWU2 1503 aa17.21■□□□□ 0.35
BRF1-222ENST00000635152 NEURL4Q96JN8 1562 aa17.21■□□□□ 0.35
BRF1-222ENST00000635152 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
BRF1-222ENST00000635152 ZNF521Q96K83 1311 aa17.21■□□□□ 0.35
BRF1-222ENST00000635152 ANP32AP39687 249 aaKnown RBP17.2■□□□□ 0.34
BRF1-222ENST00000635152 MLH3Q9UHC1 1453 aa17.2■□□□□ 0.34
BRF1-222ENST00000635152 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
BRF1-222ENST00000635152 NPM2Q86SE8 214 aaKnown RBP17.19■□□□□ 0.34
BRF1-222ENST00000635152 ADGRB3O60242 1522 aa17.19■□□□□ 0.34
BRF1-222ENST00000635152 NRXN1Q9ULB1 1477 aa17.19■□□□□ 0.34
BRF1-222ENST00000635152 PAK3O75914 559 aaPredicted RBP17.19■□□□□ 0.34
BRF1-222ENST00000635152 NOP58Q9Y2X3 529 aaKnown RBP17.18■□□□□ 0.34
BRF1-222ENST00000635152 SLFN5Q08AF3 891 aa17.18■□□□□ 0.34
BRF1-222ENST00000635152 MORC1Q86VD1 984 aa17.18■□□□□ 0.34
BRF1-222ENST00000635152 NSD3Q9BZ95 1437 aa17.17■□□□□ 0.34
BRF1-222ENST00000635152 HECW2Q9P2P5 1572 aa17.17■□□□□ 0.34
BRF1-222ENST00000635152 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
BRF1-222ENST00000635152 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
BRF1-222ENST00000635152 IFT172Q9UG01 1749 aa17.16■□□□□ 0.34
BRF1-222ENST00000635152 DMRT2Q9Y5R5 561 aa17.16■□□□□ 0.34
BRF1-222ENST00000635152 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
BRF1-222ENST00000635152 PDE4AP27815 886 aa17.14■□□□□ 0.34
BRF1-222ENST00000635152 ABCC3O15438 1527 aa17.14■□□□□ 0.34
BRF1-222ENST00000635152 IDI1Q13907 227 aa17.14■□□□□ 0.33
BRF1-222ENST00000635152 STK26Q9P289 416 aa17.14■□□□□ 0.33
BRF1-222ENST00000635152 IPO9Q96P70 1041 aaKnown RBP17.14■□□□□ 0.33
BRF1-222ENST00000635152 VGFO15240 615 aaPredicted RBP17.13■□□□□ 0.33
BRF1-222ENST00000635152 RPGRIP1LQ68CZ1 1315 aa17.13■□□□□ 0.33
BRF1-222ENST00000635152 BCAR3O75815 825 aa17.12■□□□□ 0.33
BRF1-222ENST00000635152 RRP7AQ9Y3A4 280 aaKnown RBP17.12■□□□□ 0.33
BRF1-222ENST00000635152 CFAP74Q9C0B2 1584 aa17.12■□□□□ 0.33
BRF1-222ENST00000635152 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
BRF1-222ENST00000635152 CABP2Q9NPB3 220 aa17.12■□□□□ 0.33
BRF1-222ENST00000635152 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.11■□□□□ 0.33
BRF1-222ENST00000635152 NBR1Q14596 966 aa17.11■□□□□ 0.33
BRF1-222ENST00000635152 ADGRB1O14514 1584 aa17.1■□□□□ 0.33
BRF1-222ENST00000635152 TRMT2AQ8IZ69 625 aaKnown RBP17.1■□□□□ 0.33
BRF1-222ENST00000635152 ZBTB47Q9UFB7 747 aaPredicted RBP17.1■□□□□ 0.33
BRF1-222ENST00000635152 SETBP1Q9Y6X0 1596 aa17.1■□□□□ 0.33
BRF1-222ENST00000635152 YEATS2Q9ULM3 1422 aa17.09■□□□□ 0.33
BRF1-222ENST00000635152 E9PSI1 815 aa17.09■□□□□ 0.33
BRF1-222ENST00000635152 MTHFSP49914 203 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms