RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 DNMT1P26358 1616 aaKnown RBP6.42□□□□□ -1.38
CHD2-220ENST00000630813 IRX2Q9BZI1 471 aaPredicted RBP6.41□□□□□ -1.38
CHD2-220ENST00000630813 PHF8Q9UPP1 1060 aa6.41□□□□□ -1.38
CHD2-220ENST00000630813 ROCK1Q13464 1354 aa6.41□□□□□ -1.38
CHD2-220ENST00000630813 PTPRGP23470 1445 aa6.41□□□□□ -1.38
CHD2-220ENST00000630813 CAMSAP2Q08AD1 1489 aa6.4□□□□□ -1.39
CHD2-220ENST00000630813 CLASP1Q7Z460 1538 aa6.4□□□□□ -1.39
CHD2-220ENST00000630813 CDC42BPAQ5VT25 1732 aa6.39□□□□□ -1.39
CHD2-220ENST00000630813 ARHGAP33O14559 1287 aa6.39□□□□□ -1.39
CHD2-220ENST00000630813 ACIN1Q9UKV3 1341 aaKnown RBP6.39□□□□□ -1.39
CHD2-220ENST00000630813 KCTD12Q96CX2 325 aaKnown RBP6.38□□□□□ -1.39
CHD2-220ENST00000630813 MPHOSPH9Q99550 1183 aa6.38□□□□□ -1.39
CHD2-220ENST00000630813 TIMELESSQ9UNS1 1208 aa6.38□□□□□ -1.39
CHD2-220ENST00000630813 NCOA1Q15788 1441 aa6.38□□□□□ -1.39
CHD2-220ENST00000630813 PZPP20742 1482 aa6.38□□□□□ -1.39
CHD2-220ENST00000630813 ADGRL2O95490 1459 aa6.37□□□□□ -1.39
CHD2-220ENST00000630813 ANKRD30BQ9BXX2 1392 aa6.37□□□□□ -1.39
CHD2-220ENST00000630813 RGS20O76081 388 aa6.37□□□□□ -1.39
CHD2-220ENST00000630813 CFDP1Q9UEE9 299 aaPredicted RBP6.37□□□□□ -1.39
CHD2-220ENST00000630813 CDK11AQ9UQ88 783 aaPredicted RBP6.37□□□□□ -1.39
CHD2-220ENST00000630813 CROCC2H7BZ55 1655 aa6.36□□□□□ -1.39
CHD2-220ENST00000630813 MBD5Q9P267 1494 aa6.36□□□□□ -1.39
CHD2-220ENST00000630813 PLEKHD1A6NEE1 506 aa6.36□□□□□ -1.39
CHD2-220ENST00000630813 IFNLR1Q8IU57 520 aaPredicted RBP6.36□□□□□ -1.39
CHD2-220ENST00000630813 HIRIP3Q9BW71 556 aaPredicted RBP6.36□□□□□ -1.39
CHD2-220ENST00000630813 PCDHGA4Q9Y5G9 962 aa6.36□□□□□ -1.39
CHD2-220ENST00000630813 ITSN2Q9NZM3 1697 aa6.36□□□□□ -1.39
CHD2-220ENST00000630813 TK2O00142 265 aa6.35□□□□□ -1.39
CHD2-220ENST00000630813 TRIM52Q96A61 297 aa6.35□□□□□ -1.39
CHD2-220ENST00000630813 KCNH8Q96L42 1107 aa6.35□□□□□ -1.39
CHD2-220ENST00000630813 ZNF777Q9ULD5 760 aaPredicted RBP6.35□□□□□ -1.39
CHD2-220ENST00000630813 CDC42BPBQ9Y5S2 1711 aa6.35□□□□□ -1.39
CHD2-220ENST00000630813 SAMD9LQ8IVG5 1584 aa6.35□□□□□ -1.39
CHD2-220ENST00000630813 ADGBQ8N7X0 1667 aa6.34□□□□□ -1.39
CHD2-220ENST00000630813 C2orf72A6NCS6 295 aa6.34□□□□□ -1.39
CHD2-220ENST00000630813 HRO43593 1189 aa6.34□□□□□ -1.39
CHD2-220ENST00000630813 NBPF8Q3BBV2 869 aa6.34□□□□□ -1.39
CHD2-220ENST00000630813 STAC3Q96MF2 364 aa6.34□□□□□ -1.39
CHD2-220ENST00000630813 ABCC2Q92887 1545 aa6.34□□□□□ -1.39
CHD2-220ENST00000630813 TEX14Q8IWB6 1497 aa6.34□□□□□ -1.4
CHD2-220ENST00000630813 TTC37Q6PGP7 1564 aa6.33□□□□□ -1.4
CHD2-220ENST00000630813 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.33□□□□□ -1.4
CHD2-220ENST00000630813 PSDA5PKW4 1024 aaPredicted RBP6.33□□□□□ -1.4
CHD2-220ENST00000630813 KIF3CO14782 793 aa6.33□□□□□ -1.4
CHD2-220ENST00000630813 HNRNPMP52272 730 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHD2-220ENST00000630813 L3MBTL2Q969R5 705 aa6.33□□□□□ -1.4
CHD2-220ENST00000630813 ZFP91Q96JP5 570 aaPredicted RBP6.33□□□□□ -1.4
CHD2-220ENST00000630813 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHD2-220ENST00000630813 ARHGEF12Q9NZN5 1544 aa6.33□□□□□ -1.4
CHD2-220ENST00000630813 SHANK2Q9UPX8 1470 aa6.33□□□□□ -1.4
CHD2-220ENST00000630813 C9orf84Q5VXU9 1444 aa6.33□□□□□ -1.4
CHD2-220ENST00000630813 TONSLQ96HA7 1378 aa6.32□□□□□ -1.4
CHD2-220ENST00000630813 ARHGEF5Q12774 1597 aa6.32□□□□□ -1.4
CHD2-220ENST00000630813 RIOK3O14730 519 aaKnown RBP6.32□□□□□ -1.4
CHD2-220ENST00000630813 SLC34A2O95436 690 aa6.32□□□□□ -1.4
CHD2-220ENST00000630813 PSEN2P49810 448 aa6.32□□□□□ -1.4
CHD2-220ENST00000630813 NLRP6P59044 892 aa6.32□□□□□ -1.4
CHD2-220ENST00000630813 DDX10Q13206 875 aaKnown RBP6.32□□□□□ -1.4
CHD2-220ENST00000630813 DMRTA1Q5VZB9 504 aa6.32□□□□□ -1.4
CHD2-220ENST00000630813 YTHDC1Q96MU7 727 aaKnown RBP6.32□□□□□ -1.4
CHD2-220ENST00000630813 UHRF1BP1LA0JNW5 1464 aa6.32□□□□□ -1.4
CHD2-220ENST00000630813 RPRD2Q5VT52 1461 aaKnown RBP6.32□□□□□ -1.4
CHD2-220ENST00000630813 PREX2Q70Z35 1606 aa6.32□□□□□ -1.4
CHD2-220ENST00000630813 C11orf95C9JLR9 678 aaPredicted RBP6.31□□□□□ -1.4
CHD2-220ENST00000630813 PTPN5P54829 565 aa6.31□□□□□ -1.4
CHD2-220ENST00000630813 ANKRD30AQ9BXX3 1397 aa6.31□□□□□ -1.4
CHD2-220ENST00000630813 ZCCHC11Q5TAX3 1644 aaKnown RBP6.3□□□□□ -1.4
CHD2-220ENST00000630813 ANKRD50Q9ULJ7 1429 aa6.3□□□□□ -1.4
CHD2-220ENST00000630813 KDM5DQ9BY66 1539 aa6.3□□□□□ -1.4
CHD2-220ENST00000630813 VGFO15240 615 aaPredicted RBP6.29□□□□□ -1.4
CHD2-220ENST00000630813 HSPA5P11021 654 aaKnown RBP6.29□□□□□ -1.4
CHD2-220ENST00000630813 IFFO2Q5TF58 517 aa6.29□□□□□ -1.4
CHD2-220ENST00000630813 KIAA1107Q9UPP5 1409 aa6.29□□□□□ -1.4
CHD2-220ENST00000630813 CCDC141Q6ZP82 1450 aa6.28□□□□□ -1.4
CHD2-220ENST00000630813 MAST1Q9Y2H9 1570 aa6.28□□□□□ -1.4
CHD2-220ENST00000630813 SPATA31E1Q6ZUB1 1445 aa6.28□□□□□ -1.4
CHD2-220ENST00000630813 A0A0G2JS52 829 aa6.28□□□□□ -1.4
CHD2-220ENST00000630813 PKD2Q13563 968 aa6.28□□□□□ -1.4
CHD2-220ENST00000630813 FBXO22Q8NEZ5 403 aa6.28□□□□□ -1.4
CHD2-220ENST00000630813 GTF3C3Q9Y5Q9 886 aa6.28□□□□□ -1.4
CHD2-220ENST00000630813 SYCP2Q9BX26 1530 aa6.28□□□□□ -1.4
CHD2-220ENST00000630813 KIF15Q9NS87 1388 aa6.28□□□□□ -1.4
CHD2-220ENST00000630813 PLA2R1Q13018 1463 aa6.28□□□□□ -1.4
CHD2-220ENST00000630813 WASHC2AQ641Q2 1341 aa6.27□□□□□ -1.41
CHD2-220ENST00000630813 PLCH2O75038 1416 aa6.27□□□□□ -1.41
CHD2-220ENST00000630813 TRAPPC8Q9Y2L5 1435 aa6.27□□□□□ -1.41
CHD2-220ENST00000630813 RNF25Q96BH1 459 aaPredicted RBP6.27□□□□□ -1.41
CHD2-220ENST00000630813 ARHGAP5Q13017 1502 aa6.26□□□□□ -1.41
CHD2-220ENST00000630813 CENPBP07199 599 aaPredicted RBP6.26□□□□□ -1.41
CHD2-220ENST00000630813 Q6ZNB5 142 aa6.26□□□□□ -1.41
CHD2-220ENST00000630813 TMC2Q8TDI7 906 aa6.26□□□□□ -1.41
CHD2-220ENST00000630813 NUP155O75694 1391 aa6.26□□□□□ -1.41
CHD2-220ENST00000630813 PLEKHH2Q8IVE3 1493 aa6.26□□□□□ -1.41
CHD2-220ENST00000630813 MYO5CQ9NQX4 1742 aa6.25□□□□□ -1.41
CHD2-220ENST00000630813 TSPY4P0CV99 314 aa6.25□□□□□ -1.41
CHD2-220ENST00000630813 TSPY10P0CW01 314 aa6.25□□□□□ -1.41
CHD2-220ENST00000630813 UNC13BO14795 1591 aa6.25□□□□□ -1.41
CHD2-220ENST00000630813 ABCC1P33527 1531 aa6.25□□□□□ -1.41
CHD2-220ENST00000630813 PPP4R3BQ5MIZ7 849 aa6.24□□□□□ -1.41
CHD2-220ENST00000630813 BCORL1Q5H9F3 1711 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms