RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.42□□□□□ -0.9
CDKL5-207ENST00000624700 PRKCSHP14314 528 aaPredicted RBP9.41□□□□□ -0.9
CDKL5-207ENST00000624700 COPS2P61201 443 aa9.4□□□□□ -0.9
CDKL5-207ENST00000624700 NKX2-3Q8TAU0 364 aa9.4□□□□□ -0.9
CDKL5-207ENST00000624700 PRR14Q9BWN1 585 aa9.4□□□□□ -0.9
CDKL5-207ENST00000624700 V9GY48 417 aaPredicted RBP9.4□□□□□ -0.9
CDKL5-207ENST00000624700 GFRA3O60609 400 aa9.39□□□□□ -0.91
CDKL5-207ENST00000624700 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
CDKL5-207ENST00000624700 NUTM2FA1L443 756 aa9.38□□□□□ -0.91
CDKL5-207ENST00000624700 DNAJB2P25686 324 aa9.38□□□□□ -0.91
CDKL5-207ENST00000624700 GGCXP38435 758 aa9.38□□□□□ -0.91
CDKL5-207ENST00000624700 ADGRG1Q9Y653 693 aa9.37□□□□□ -0.91
CDKL5-207ENST00000624700 ZPR1O75312 459 aa9.36□□□□□ -0.91
CDKL5-207ENST00000624700 TMEM134Q9H6X4 195 aa9.36□□□□□ -0.91
CDKL5-207ENST00000624700 PCDHB3Q9Y5E6 796 aa9.36□□□□□ -0.91
CDKL5-207ENST00000624700 TMUB1Q9BVT8 246 aa9.35□□□□□ -0.91
CDKL5-207ENST00000624700 FCHSD2O94868 740 aa9.34□□□□□ -0.91
CDKL5-207ENST00000624700 ZC3H15Q8WU90 426 aaKnown RBP9.34□□□□□ -0.91
CDKL5-207ENST00000624700 RCCD1A6NED2 376 aa9.33□□□□□ -0.92
CDKL5-207ENST00000624700 NRG2O14511 850 aaPredicted RBP9.33□□□□□ -0.92
CDKL5-207ENST00000624700 TRAF7Q6Q0C0 670 aa9.32□□□□□ -0.92
CDKL5-207ENST00000624700 BLOC1S3Q6QNY0 202 aa9.32□□□□□ -0.92
CDKL5-207ENST00000624700 FAM161AQ3B820 660 aa9.31□□□□□ -0.92
CDKL5-207ENST00000624700 RBM26Q5T8P6 1007 aaKnown RBP9.31□□□□□ -0.92
CDKL5-207ENST00000624700 GPIHBP1Q8IV16 184 aa9.31□□□□□ -0.92
CDKL5-207ENST00000624700 LCE2BO14633 110 aa9.3□□□□□ -0.92
CDKL5-207ENST00000624700 KMT5BQ4FZB7 885 aa9.3□□□□□ -0.92
CDKL5-207ENST00000624700 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.29□□□□□ -0.92
CDKL5-207ENST00000624700 ACTN4O43707 911 aaKnown RBP9.29□□□□□ -0.92
CDKL5-207ENST00000624700 ZMYND10O75800 440 aa9.29□□□□□ -0.92
CDKL5-207ENST00000624700 OATP04181 439 aa9.28□□□□□ -0.92
CDKL5-207ENST00000624700 CFHP08603 1231 aa9.28□□□□□ -0.92
CDKL5-207ENST00000624700 PDZRN3Q9UPQ7 1066 aa9.28□□□□□ -0.92
CDKL5-207ENST00000624700 RNF223E7ERA6 249 aa9.26□□□□□ -0.93
CDKL5-207ENST00000624700 SLC10A3P09131 477 aa9.26□□□□□ -0.93
CDKL5-207ENST00000624700 BARGINQ6ZT62 677 aa9.26□□□□□ -0.93
CDKL5-207ENST00000624700 HIC1Q14526 733 aa9.25□□□□□ -0.93
CDKL5-207ENST00000624700 PXYLP1Q8TE99 480 aa9.25□□□□□ -0.93
CDKL5-207ENST00000624700 TLL1O43897 1013 aa9.24□□□□□ -0.93
CDKL5-207ENST00000624700 NR1I2O75469 434 aa9.24□□□□□ -0.93
CDKL5-207ENST00000624700 SLC19A1P41440 591 aa9.24□□□□□ -0.93
CDKL5-207ENST00000624700 KRI1Q8N9T8 703 aaKnown RBP9.24□□□□□ -0.93
CDKL5-207ENST00000624700 RSPH4AQ5TD94 716 aa9.23□□□□□ -0.93
CDKL5-207ENST00000624700 METTL3Q86U44 580 aaKnown RBP9.22□□□□□ -0.93
CDKL5-207ENST00000624700 ANKLE1Q8NAG6 615 aa9.22□□□□□ -0.93
CDKL5-207ENST00000624700 S1PR4O95977 384 aa9.21□□□□□ -0.94
CDKL5-207ENST00000624700 ADH1BP00325 375 aa9.2□□□□□ -0.94
CDKL5-207ENST00000624700 EMID1Q96A84 441 aaPredicted RBP9.2□□□□□ -0.94
CDKL5-207ENST00000624700 AK7Q96M32 723 aa9.2□□□□□ -0.94
CDKL5-207ENST00000624700 GNPATO15228 680 aa9.19□□□□□ -0.94
CDKL5-207ENST00000624700 MINK1Q8N4C8 1332 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-207ENST00000624700 PPEF1O14829 653 aaPredicted RBP9.18□□□□□ -0.94
CDKL5-207ENST00000624700 SPRYD7Q5W111 196 aa9.18□□□□□ -0.94
CDKL5-207ENST00000624700 TRIM67Q6ZTA4 783 aa9.18□□□□□ -0.94
CDKL5-207ENST00000624700 SCUBE3Q8IX30 993 aa9.18□□□□□ -0.94
CDKL5-207ENST00000624700 SLC24A3Q9HC58 644 aa9.18□□□□□ -0.94
CDKL5-207ENST00000624700 ZNF598Q86UK7 904 aaKnown RBP9.17□□□□□ -0.94
CDKL5-207ENST00000624700 SLC6A16Q9GZN6 736 aa9.17□□□□□ -0.94
CDKL5-207ENST00000624700 FECHP22830 423 aa9.16□□□□□ -0.94
CDKL5-207ENST00000624700 LIAT1Q6ZQX7 453 aa9.16□□□□□ -0.94
CDKL5-207ENST00000624700 DAXXQ9UER7 740 aaPredicted RBP9.16□□□□□ -0.94
CDKL5-207ENST00000624700 GPR37O15354 613 aa9.15□□□□□ -0.94
CDKL5-207ENST00000624700 MAP2K5Q13163 448 aa9.15□□□□□ -0.94
CDKL5-207ENST00000624700 PUS10Q3MIT2 529 aaKnown RBP9.15□□□□□ -0.94
CDKL5-207ENST00000624700 PRR20EP86478 221 aa9.14□□□□□ -0.95
CDKL5-207ENST00000624700 PRR20CP86479 221 aa9.14□□□□□ -0.95
CDKL5-207ENST00000624700 PRR20DP86480 221 aa9.14□□□□□ -0.95
CDKL5-207ENST00000624700 PRR20BP86481 221 aa9.14□□□□□ -0.95
CDKL5-207ENST00000624700 PRR20AP86496 221 aa9.14□□□□□ -0.95
CDKL5-207ENST00000624700 RDH13Q8NBN7 331 aa9.14□□□□□ -0.95
CDKL5-207ENST00000624700 IRF6O14896 467 aa9.13□□□□□ -0.95
CDKL5-207ENST00000624700 ZNF697Q5TEC3 545 aa9.13□□□□□ -0.95
CDKL5-207ENST00000624700 ZNF787Q6DD87 383 aa9.13□□□□□ -0.95
CDKL5-207ENST00000624700 SPSB2Q99619 263 aa9.13□□□□□ -0.95
CDKL5-207ENST00000624700 DDX11L8A8MPP1 907 aa9.11□□□□□ -0.95
CDKL5-207ENST00000624700 DGAT1O75907 488 aa9.11□□□□□ -0.95
CDKL5-207ENST00000624700 PKDCCQ504Y2 493 aa9.11□□□□□ -0.95
CDKL5-207ENST00000624700 PLA2G2CQ5R387 149 aa9.1□□□□□ -0.95
CDKL5-207ENST00000624700 MORN1Q5T089 497 aa9.1□□□□□ -0.95
CDKL5-207ENST00000624700 SULF1Q8IWU6 871 aa9.1□□□□□ -0.95
CDKL5-207ENST00000624700 ATP6V1AP38606 617 aa9.09□□□□□ -0.95
CDKL5-207ENST00000624700 FUT2Q10981 343 aa9.09□□□□□ -0.95
CDKL5-207ENST00000624700 NLRP7Q8WX94 980 aa9.09□□□□□ -0.95
CDKL5-207ENST00000624700 GDF9O60383 454 aa9.08□□□□□ -0.96
CDKL5-207ENST00000624700 GCGRP47871 477 aa9.08□□□□□ -0.96
CDKL5-207ENST00000624700 PHOX2BQ99453 314 aa9.08□□□□□ -0.96
CDKL5-207ENST00000624700 TNFRSF10AO00220 468 aa9.07□□□□□ -0.96
CDKL5-207ENST00000624700 TRIM66O15016 1216 aa9.07□□□□□ -0.96
CDKL5-207ENST00000624700 MYT1Q01538 1121 aa9.07□□□□□ -0.96
CDKL5-207ENST00000624700 THAP11Q96EK4 314 aa9.07□□□□□ -0.96
CDKL5-207ENST00000624700 FMNL1O95466 1100 aaPredicted RBP9.06□□□□□ -0.96
CDKL5-207ENST00000624700 NEUROD2Q15784 382 aa9.06□□□□□ -0.96
CDKL5-207ENST00000624700 SLC27A5Q9Y2P5 690 aa9.06□□□□□ -0.96
CDKL5-207ENST00000624700 FAM187AA6NFU0 413 aa9.05□□□□□ -0.96
CDKL5-207ENST00000624700 CCDC102AQ96A19 550 aa9.05□□□□□ -0.96
CDKL5-207ENST00000624700 SALL2Q9Y467 1007 aaPredicted RBP9.05□□□□□ -0.96
CDKL5-207ENST00000624700 RPIAP49247 311 aa9.04□□□□□ -0.96
CDKL5-207ENST00000624700 BRPF1P55201 1214 aaPredicted RBP9.04□□□□□ -0.96
CDKL5-207ENST00000624700 PDE4DQ08499 809 aa9.03□□□□□ -0.96
CDKL5-207ENST00000624700 TMEM132AQ24JP5 1023 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms