RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 NBPF14Q5TI25 921 aa7.67□□□□□ -1.18
CDKL5-205ENST00000623535 HSP90AB2PQ58FF8 381 aa7.67□□□□□ -1.18
CDKL5-205ENST00000623535 KIF3BO15066 747 aa7.67□□□□□ -1.18
CDKL5-205ENST00000623535 MSNP26038 577 aaKnown RBP7.67□□□□□ -1.18
CDKL5-205ENST00000623535 NF2P35240 595 aa7.67□□□□□ -1.18
CDKL5-205ENST00000623535 PABPN1LA6NDY0 278 aaKnown RBP7.67□□□□□ -1.18
CDKL5-205ENST00000623535 CCDC180Q9P1Z9 1646 aa7.66□□□□□ -1.18
CDKL5-205ENST00000623535 POLD1P28340 1107 aa7.66□□□□□ -1.18
CDKL5-205ENST00000623535 CA8P35219 290 aa7.66□□□□□ -1.18
CDKL5-205ENST00000623535 CPLX1O14810 134 aa7.66□□□□□ -1.18
CDKL5-205ENST00000623535 PHF14O94880 888 aa7.66□□□□□ -1.18
CDKL5-205ENST00000623535 NFXL1Q6ZNB6 911 aa7.66□□□□□ -1.18
CDKL5-205ENST00000623535 E9PSI1 815 aa7.66□□□□□ -1.18
CDKL5-205ENST00000623535 TNIP1Q15025 636 aa7.66□□□□□ -1.18
CDKL5-205ENST00000623535 SCLT1Q96NL6 688 aa7.66□□□□□ -1.18
CDKL5-205ENST00000623535 FEZ1Q99689 392 aa7.65□□□□□ -1.18
CDKL5-205ENST00000623535 SLC4A3P48751 1232 aa7.65□□□□□ -1.18
CDKL5-205ENST00000623535 HNRNPMP52272 730 aaKnown RBP eCLIP7.65□□□□□ -1.18
CDKL5-205ENST00000623535 DCAF11Q8TEB1 546 aa7.65□□□□□ -1.18
CDKL5-205ENST00000623535 VGFO15240 615 aaPredicted RBP7.65□□□□□ -1.18
CDKL5-205ENST00000623535 OFD1O75665 1012 aa7.65□□□□□ -1.18
CDKL5-205ENST00000623535 APBB1O00213 710 aa7.65□□□□□ -1.18
CDKL5-205ENST00000623535 ERC1Q8IUD2 1116 aa7.65□□□□□ -1.18
CDKL5-205ENST00000623535 RUFY2Q8WXA3 655 aa7.65□□□□□ -1.18
CDKL5-205ENST00000623535 SLC4A10Q6U841 1118 aa7.65□□□□□ -1.19
CDKL5-205ENST00000623535 NACADO15069 1562 aa7.65□□□□□ -1.19
CDKL5-205ENST00000623535 CC2D1BQ5T0F9 858 aaKnown RBP7.64□□□□□ -1.19
CDKL5-205ENST00000623535 MFAP1P55081 439 aaKnown RBP7.64□□□□□ -1.19
CDKL5-205ENST00000623535 AMER1Q5JTC6 1135 aaPredicted RBP7.64□□□□□ -1.19
CDKL5-205ENST00000623535 WRNQ14191 1432 aaPredicted RBP eCLIP7.64□□□□□ -1.19
CDKL5-205ENST00000623535 TBC1D2BQ9UPU7 963 aa7.64□□□□□ -1.19
CDKL5-205ENST00000623535 IPO9Q96P70 1041 aaKnown RBP7.64□□□□□ -1.19
CDKL5-205ENST00000623535 CENPJQ9HC77 1338 aaPredicted RBP7.64□□□□□ -1.19
CDKL5-205ENST00000623535 ZMYND15Q9H091 742 aa7.64□□□□□ -1.19
CDKL5-205ENST00000623535 RBM27Q9P2N5 1060 aaKnown RBP7.64□□□□□ -1.19
CDKL5-205ENST00000623535 UQCRHLA0A096LP55 91 aa7.64□□□□□ -1.19
CDKL5-205ENST00000623535 CDK5RAP3Q96JB5 506 aa7.64□□□□□ -1.19
CDKL5-205ENST00000623535 PROSER2Q86WR7 435 aaPredicted RBP7.63□□□□□ -1.19
CDKL5-205ENST00000623535 ATP6V1DQ9Y5K8 247 aa7.63□□□□□ -1.19
CDKL5-205ENST00000623535 CLEC11AQ9Y240 323 aa7.63□□□□□ -1.19
CDKL5-205ENST00000623535 NLRP2Q9NX02 1062 aa7.63□□□□□ -1.19
CDKL5-205ENST00000623535 CHMP5Q9NZZ3 219 aa7.63□□□□□ -1.19
CDKL5-205ENST00000623535 NUTM2FA1L443 756 aa7.62□□□□□ -1.19
CDKL5-205ENST00000623535 GBP4Q96PP9 640 aa7.62□□□□□ -1.19
CDKL5-205ENST00000623535 PLCD3Q8N3E9 789 aa7.62□□□□□ -1.19
CDKL5-205ENST00000623535 GPS2Q13227 327 aa7.62□□□□□ -1.19
CDKL5-205ENST00000623535 MATR3P43243 847 aaKnown RBP eCLIP7.62□□□□□ -1.19
CDKL5-205ENST00000623535 RNF20Q5VTR2 975 aa7.62□□□□□ -1.19
CDKL5-205ENST00000623535 BIN2Q9UBW5 565 aaPredicted RBP7.62□□□□□ -1.19
CDKL5-205ENST00000623535 MIER1Q8N108 512 aa7.62□□□□□ -1.19
CDKL5-205ENST00000623535 ARHGEF6Q15052 776 aa7.62□□□□□ -1.19
CDKL5-205ENST00000623535 STAC3Q96MF2 364 aa7.62□□□□□ -1.19
CDKL5-205ENST00000623535 ITPRIPQ8IWB1 547 aa7.62□□□□□ -1.19
CDKL5-205ENST00000623535 ZNHIT6Q9NWK9 470 aaKnown RBP7.62□□□□□ -1.19
CDKL5-205ENST00000623535 GRM1Q13255 1194 aa7.61□□□□□ -1.19
CDKL5-205ENST00000623535 ZSCAN29Q8IWY8 852 aaPredicted RBP7.61□□□□□ -1.19
CDKL5-205ENST00000623535 STRN4Q9NRL3 753 aa7.61□□□□□ -1.19
CDKL5-205ENST00000623535 NGEFQ8N5V2 710 aa7.61□□□□□ -1.19
CDKL5-205ENST00000623535 ZNF652Q9Y2D9 606 aa7.61□□□□□ -1.19
CDKL5-205ENST00000623535 ANKRD30AQ9BXX3 1397 aa7.61□□□□□ -1.19
CDKL5-205ENST00000623535 VTI1AQ96AJ9 217 aa7.61□□□□□ -1.19
CDKL5-205ENST00000623535 MYO1BO43795 1136 aa7.61□□□□□ -1.19
CDKL5-205ENST00000623535 RALYLQ86SE5 291 aaKnown RBP7.61□□□□□ -1.19
CDKL5-205ENST00000623535 PDCL3Q9H2J4 239 aa7.61□□□□□ -1.19
CDKL5-205ENST00000623535 HMGB1P09429 215 aaKnown RBP7.61□□□□□ -1.19
CDKL5-205ENST00000623535 LPXNO60711 386 aa7.61□□□□□ -1.19
CDKL5-205ENST00000623535 WDR78Q5VTH9 848 aa7.61□□□□□ -1.19
CDKL5-205ENST00000623535 EZRP15311 586 aaKnown RBP7.61□□□□□ -1.19
CDKL5-205ENST00000623535 NOL8Q76FK4 1167 aaKnown RBP7.6□□□□□ -1.19
CDKL5-205ENST00000623535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.6□□□□□ -1.19
CDKL5-205ENST00000623535 HOMER1Q86YM7 354 aa7.6□□□□□ -1.19
CDKL5-205ENST00000623535 ROCK1Q13464 1354 aa7.6□□□□□ -1.19
CDKL5-205ENST00000623535 POTEJP0CG39 1038 aa7.6□□□□□ -1.19
CDKL5-205ENST00000623535 TXLNAP40222 546 aa7.6□□□□□ -1.19
CDKL5-205ENST00000623535 UQCRHP07919 91 aa7.6□□□□□ -1.19
CDKL5-205ENST00000623535 SLKQ9H2G2 1235 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-205ENST00000623535 ZNF287Q9HBT7 754 aa7.6□□□□□ -1.19
CDKL5-205ENST00000623535 DIAPH3Q9NSV4 1193 aa7.6□□□□□ -1.19
CDKL5-205ENST00000623535 ZPR1O75312 459 aa7.6□□□□□ -1.19
CDKL5-205ENST00000623535 KRT18P05783 430 aaKnown RBP7.6□□□□□ -1.19
CDKL5-205ENST00000623535 IBSPP21815 317 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-205ENST00000623535 BMS1Q14692 1282 aaKnown RBP7.6□□□□□ -1.19
CDKL5-205ENST00000623535 RWDD1Q9H446 243 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-205ENST00000623535 SSX2IPQ9Y2D8 614 aa7.6□□□□□ -1.19
CDKL5-205ENST00000623535 ZKSCAN1P17029 563 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-205ENST00000623535 CBX1P83916 185 aa7.6□□□□□ -1.19
CDKL5-205ENST00000623535 ATP2B2Q01814 1243 aa7.6□□□□□ -1.19
CDKL5-205ENST00000623535 G3BP1Q13283 466 aaKnown RBP eCLIP7.6□□□□□ -1.19
CDKL5-205ENST00000623535 ST18O60284 1047 aa7.6□□□□□ -1.19
CDKL5-205ENST00000623535 RALBP1Q15311 655 aa7.6□□□□□ -1.19
CDKL5-205ENST00000623535 THEMISQ8N1K5 641 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-205ENST00000623535 KTN1Q86UP2 1357 aaKnown RBP7.59□□□□□ -1.19
CDKL5-205ENST00000623535 TCERG1O14776 1098 aaKnown RBP7.59□□□□□ -1.19
CDKL5-205ENST00000623535 LMOD1P29536 600 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-205ENST00000623535 FYB1O15117 783 aa7.59□□□□□ -1.19
CDKL5-205ENST00000623535 TRIM22Q8IYM9 498 aa7.59□□□□□ -1.19
CDKL5-205ENST00000623535 FERMT2Q96AC1 680 aa7.59□□□□□ -1.19
CDKL5-205ENST00000623535 CECR2Q9BXF3 1484 aa7.59□□□□□ -1.19
CDKL5-205ENST00000623535 EVC2Q86UK5 1308 aa7.59□□□□□ -1.19
CDKL5-205ENST00000623535 KIF4AO95239 1232 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms