RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 ADAMTS8Q9UP79 889 aa28.01■■■□□ 2.07
PCSK6-220ENST00000622483 PZPP20742 1482 aa28■■■□□ 2.07
PCSK6-220ENST00000622483 L1TD1Q5T7N2 865 aaKnown RBP27.99■■■□□ 2.07
PCSK6-220ENST00000622483 GGT6Q6P531 493 aa27.98■■■□□ 2.07
PCSK6-220ENST00000622483 USP19O94966 1318 aa27.98■■■□□ 2.07
PCSK6-220ENST00000622483 CD109Q6YHK3 1445 aa27.97■■■□□ 2.07
PCSK6-220ENST00000622483 GOLGA6L3A6NEY3 463 aa27.96■■■□□ 2.07
PCSK6-220ENST00000622483 IGHDP01880 384 aa27.96■■■□□ 2.07
PCSK6-220ENST00000622483 RSPH4AQ5TD94 716 aa27.96■■■□□ 2.07
PCSK6-220ENST00000622483 MYO5CQ9NQX4 1742 aa27.95■■■□□ 2.07
PCSK6-220ENST00000622483 BCAR3O75815 825 aa27.94■■■□□ 2.06
PCSK6-220ENST00000622483 ADGRL1O94910 1474 aa27.93■■■□□ 2.06
PCSK6-220ENST00000622483 KDM5CP41229 1560 aa27.92■■■□□ 2.06
PCSK6-220ENST00000622483 CCDC146Q8IYE0 955 aa27.92■■■□□ 2.06
PCSK6-220ENST00000622483 BECN1Q14457 450 aa27.91■■■□□ 2.06
PCSK6-220ENST00000622483 DUSP27Q5VZP5 1158 aa27.9■■■□□ 2.06
PCSK6-220ENST00000622483 ADGRL2O95490 1459 aa27.9■■■□□ 2.06
PCSK6-220ENST00000622483 PANK3Q9H999 370 aa27.89■■■□□ 2.06
PCSK6-220ENST00000622483 NBPF1Q3BBV0 1214 aa27.87■■■□□ 2.05
PCSK6-220ENST00000622483 PARD3Q8TEW0 1356 aa27.87■■■□□ 2.05
PCSK6-220ENST00000622483 PLEKHH1Q9ULM0 1364 aa27.87■■■□□ 2.05
PCSK6-220ENST00000622483 PER1O15534 1290 aaPredicted RBP27.86■■■□□ 2.05
PCSK6-220ENST00000622483 CLCN1P35523 988 aa27.85■■■□□ 2.05
PCSK6-220ENST00000622483 CROCC2H7BZ55 1655 aa27.85■■■□□ 2.05
PCSK6-220ENST00000622483 KIAA1107Q9UPP5 1409 aa27.84■■■□□ 2.05
PCSK6-220ENST00000622483 RRP9O43818 475 aaKnown RBP27.84■■■□□ 2.05
PCSK6-220ENST00000622483 SPINK5Q9NQ38 1064 aaPredicted RBP27.84■■■□□ 2.05
PCSK6-220ENST00000622483 WDR43Q15061 677 aaKnown RBP eCLIP27.82■■■□□ 2.04
PCSK6-220ENST00000622483 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.82■■■□□ 2.04
PCSK6-220ENST00000622483 PLEKHG5O94827 1062 aa27.81■■■□□ 2.04
PCSK6-220ENST00000622483 TBC1D2Q9BYX2 928 aa27.81■■■□□ 2.04
PCSK6-220ENST00000622483 RIMBP3CA6NJZ7 1639 aa27.81■■■□□ 2.04
PCSK6-220ENST00000622483 RIMBP3BA6NNM3 1639 aa27.81■■■□□ 2.04
PCSK6-220ENST00000622483 RIMBP3Q9UFD9 1639 aa27.81■■■□□ 2.04
PCSK6-220ENST00000622483 ERBB4Q15303 1308 aa27.81■■■□□ 2.04
PCSK6-220ENST00000622483 CHGAP10645 457 aaKnown RBP27.81■■■□□ 2.04
PCSK6-220ENST00000622483 ADGBQ8N7X0 1667 aa27.81■■■□□ 2.04
PCSK6-220ENST00000622483 GOLGA2Q08379 1002 aa27.81■■■□□ 2.04
PCSK6-220ENST00000622483 ANTXR1Q9H6X2 564 aa27.81■■■□□ 2.04
PCSK6-220ENST00000622483 MLECQ14165 292 aa27.8■■■□□ 2.04
PCSK6-220ENST00000622483 SHANK2Q9UPX8 1470 aa27.8■■■□□ 2.04
PCSK6-220ENST00000622483 COG6Q9Y2V7 657 aa27.8■■■□□ 2.04
PCSK6-220ENST00000622483 ABCC1P33527 1531 aa27.79■■■□□ 2.04
PCSK6-220ENST00000622483 PANK1Q8TE04 598 aa27.79■■■□□ 2.04
PCSK6-220ENST00000622483 ARHGEF5Q12774 1597 aa27.78■■■□□ 2.04
PCSK6-220ENST00000622483 ARID3AQ99856 593 aa27.78■■■□□ 2.04
PCSK6-220ENST00000622483 CANXP27824 592 aaKnown RBP27.77■■■□□ 2.04
PCSK6-220ENST00000622483 MCM4P33991 863 aa27.75■■■□□ 2.03
PCSK6-220ENST00000622483 PLPPR3Q6T4P5 718 aa27.75■■■□□ 2.03
PCSK6-220ENST00000622483 TRAK2O60296 914 aa27.74■■■□□ 2.03
PCSK6-220ENST00000622483 MYH16Q9H6N6 1097 aa27.73■■■□□ 2.03
PCSK6-220ENST00000622483 NUTM2DQ5VT03 806 aaPredicted RBP27.73■■■□□ 2.03
PCSK6-220ENST00000622483 ESPNB1AK53 854 aa27.72■■■□□ 2.03
PCSK6-220ENST00000622483 FAM135AQ9P2D6 1515 aa27.72■■■□□ 2.03
PCSK6-220ENST00000622483 FSD2A1L4K1 749 aa27.71■■■□□ 2.03
PCSK6-220ENST00000622483 BLMP54132 1417 aaPredicted RBP27.7■■■□□ 2.03
PCSK6-220ENST00000622483 RALGAPBQ86X10 1494 aa27.7■■■□□ 2.03
PCSK6-220ENST00000622483 UPF2Q9HAU5 1272 aaKnown RBP27.7■■■□□ 2.02
PCSK6-220ENST00000622483 DMRT2Q9Y5R5 561 aa27.7■■■□□ 2.02
PCSK6-220ENST00000622483 PODXL2Q9NZ53 605 aa27.69■■■□□ 2.02
PCSK6-220ENST00000622483 DISP3Q9P2K9 1392 aa27.69■■■□□ 2.02
PCSK6-220ENST00000622483 APAF1O14727 1248 aa27.68■■■□□ 2.02
PCSK6-220ENST00000622483 TRHP20396 242 aaPredicted RBP27.68■■■□□ 2.02
PCSK6-220ENST00000622483 RBM10P98175 930 aaKnown RBP27.67■■■□□ 2.02
PCSK6-220ENST00000622483 TRIM44Q96DX7 344 aaPredicted RBP27.67■■■□□ 2.02
PCSK6-220ENST00000622483 ABCA9Q8IUA7 1624 aa27.67■■■□□ 2.02
PCSK6-220ENST00000622483 TSPOAP1O95153 1857 aa27.66■■■□□ 2.02
PCSK6-220ENST00000622483 CCDC144AA2RUR9 1427 aa27.66■■■□□ 2.02
PCSK6-220ENST00000622483 GRPEL1Q9HAV7 217 aa27.66■■■□□ 2.02
PCSK6-220ENST00000622483 ZMYM4Q5VZL5 1548 aa27.65■■■□□ 2.02
PCSK6-220ENST00000622483 SLFN5Q08AF3 891 aa27.65■■■□□ 2.02
PCSK6-220ENST00000622483 BCL2L13Q9BXK5 485 aa27.65■■■□□ 2.02
PCSK6-220ENST00000622483 TNNQ9UQP3 1299 aa27.64■■■□□ 2.02
PCSK6-220ENST00000622483 NEUROD2Q15784 382 aa27.64■■■□□ 2.01
PCSK6-220ENST00000622483 MFAP1P55081 439 aaKnown RBP27.63■■■□□ 2.01
PCSK6-220ENST00000622483 CLUAP1Q96AJ1 413 aa27.63■■■□□ 2.01
PCSK6-220ENST00000622483 CFAP65Q6ZU64 1925 aaKnown RBP27.62■■■□□ 2.01
PCSK6-220ENST00000622483 A0A0U1RQG5 324 aaPredicted RBP27.61■■■□□ 2.01
PCSK6-220ENST00000622483 PPP2R1AP30153 589 aa27.61■■■□□ 2.01
PCSK6-220ENST00000622483 MRE11P49959 708 aa27.61■■■□□ 2.01
PCSK6-220ENST00000622483 ZFYVE16Q7Z3T8 1539 aa27.6■■■□□ 2.01
PCSK6-220ENST00000622483 TBC1D32Q96NH3 1257 aa27.6■■■□□ 2.01
PCSK6-220ENST00000622483 PLA2R1Q13018 1463 aa27.6■■■□□ 2.01
PCSK6-220ENST00000622483 ATP7AQ04656 1500 aa27.6■■■□□ 2.01
PCSK6-220ENST00000622483 DUOX2Q9NRD8 1548 aa27.59■■■□□ 2.01
PCSK6-220ENST00000622483 GAS2L3Q86XJ1 694 aa27.58■■■□□ 2.01
PCSK6-220ENST00000622483 FOXD4L1Q9NU39 408 aa27.58■■■□□ 2.01
PCSK6-220ENST00000622483 YEATS2Q9ULM3 1422 aa27.58■■■□□ 2.01
PCSK6-220ENST00000622483 KNSTRNQ9Y448 316 aa27.56■■■□□ 2
PCSK6-220ENST00000622483 UHRF1BP1Q6BDS2 1440 aa27.56■■■□□ 2
PCSK6-220ENST00000622483 KIAA1211Q6ZU35 1233 aa27.56■■■□□ 2
PCSK6-220ENST00000622483 MAPK8IP3Q9UPT6 1336 aa27.55■■■□□ 2
PCSK6-220ENST00000622483 PDZRN3Q9UPQ7 1066 aa27.54■■■□□ 2
PCSK6-220ENST00000622483 PCDHB15Q9Y5E8 787 aa27.54■■■□□ 2
PCSK6-220ENST00000622483 ZNF521Q96K83 1311 aa27.54■■■□□ 2
PCSK6-220ENST00000622483 NLRP1Q9C000 1473 aa27.54■■■□□ 2
PCSK6-220ENST00000622483 TESK2Q96S53 571 aa27.54■■■□□ 2
PCSK6-220ENST00000622483 ZNF518AQ6AHZ1 1483 aa27.53■■■□□ 2
PCSK6-220ENST00000622483 EIF3AQ14152 1382 aaKnown RBP27.52■■■□□ 2
PCSK6-220ENST00000622483 POGZQ7Z3K3 1410 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms