RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 AFF2P51816 1311 aa23.46■■□□□ 1.35
SNX12-206ENST00000622259 DUOX2Q9NRD8 1548 aa23.46■■□□□ 1.35
SNX12-206ENST00000622259 CHD2O14647 1828 aaKnown RBP23.45■■□□□ 1.34
SNX12-206ENST00000622259 DIP2AQ14689 1571 aa23.45■■□□□ 1.34
SNX12-206ENST00000622259 BCANQ96GW7 911 aa23.44■■□□□ 1.34
SNX12-206ENST00000622259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.43■■□□□ 1.34
SNX12-206ENST00000622259 ADGRB3O60242 1522 aa23.4■■□□□ 1.34
SNX12-206ENST00000622259 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.39■■□□□ 1.34
SNX12-206ENST00000622259 KIF15Q9NS87 1388 aa23.38■■□□□ 1.33
SNX12-206ENST00000622259 SETBP1Q9Y6X0 1596 aa23.37■■□□□ 1.33
SNX12-206ENST00000622259 NUTM2DQ5VT03 806 aaPredicted RBP23.37■■□□□ 1.33
SNX12-206ENST00000622259 NCOA3Q9Y6Q9 1424 aa23.36■■□□□ 1.33
SNX12-206ENST00000622259 BRINP3Q76B58 766 aa23.36■■□□□ 1.33
SNX12-206ENST00000622259 C14orf37Q86TY3 774 aa23.36■■□□□ 1.33
SNX12-206ENST00000622259 QTRT2Q9H974 415 aaKnown RBP23.36■■□□□ 1.33
SNX12-206ENST00000622259 NOS1P29475 1434 aa23.35■■□□□ 1.33
SNX12-206ENST00000622259 ERBINQ96RT1 1412 aa23.35■■□□□ 1.33
SNX12-206ENST00000622259 RBM6P78332 1123 aaKnown RBP23.35■■□□□ 1.33
SNX12-206ENST00000622259 CADPS2Q86UW7 1296 aa23.35■■□□□ 1.33
SNX12-206ENST00000622259 PLEKHG1Q9ULL1 1385 aa23.35■■□□□ 1.33
SNX12-206ENST00000622259 ZFYVE9O95405 1425 aa23.34■■□□□ 1.33
SNX12-206ENST00000622259 RRP7BPQ9NSQ0 103 aa23.34■■□□□ 1.33
SNX12-206ENST00000622259 C19orf44Q9H6X5 657 aa23.33■■□□□ 1.33
SNX12-206ENST00000622259 LMTK2Q8IWU2 1503 aa23.33■■□□□ 1.32
SNX12-206ENST00000622259 C8orf37Q96NL8 207 aa23.32■■□□□ 1.32
SNX12-206ENST00000622259 ATF3P18847 181 aa23.31■■□□□ 1.32
SNX12-206ENST00000622259 ZRANB1Q9UGI0 708 aa23.3■■□□□ 1.32
SNX12-206ENST00000622259 MYO5BQ9ULV0 1848 aa23.3■■□□□ 1.32
SNX12-206ENST00000622259 SETD5Q9C0A6 1442 aa23.29■■□□□ 1.32
SNX12-206ENST00000622259 TBX22Q9Y458 520 aa23.29■■□□□ 1.32
SNX12-206ENST00000622259 KANK1Q14678 1352 aa23.28■■□□□ 1.32
SNX12-206ENST00000622259 MYOM3Q5VTT5 1437 aa23.28■■□□□ 1.32
SNX12-206ENST00000622259 RIMS2Q9UQ26 1411 aa23.28■■□□□ 1.32
SNX12-206ENST00000622259 ATAD2Q6PL18 1390 aa23.27■■□□□ 1.31
SNX12-206ENST00000622259 ADAMTS13Q76LX8 1427 aa23.26■■□□□ 1.31
SNX12-206ENST00000622259 PPP1R15AO75807 674 aaPredicted RBP23.26■■□□□ 1.31
SNX12-206ENST00000622259 SLC52A1Q9NWF4 448 aa23.26■■□□□ 1.31
SNX12-206ENST00000622259 ASXL1Q8IXJ9 1541 aa23.26■■□□□ 1.31
SNX12-206ENST00000622259 EP400Q96L91 3159 aa23.26■■□□□ 1.31
SNX12-206ENST00000622259 ABCC5O15440 1437 aa23.25■■□□□ 1.31
SNX12-206ENST00000622259 DDX17Q92841 729 aaKnown RBP23.23■■□□□ 1.31
SNX12-206ENST00000622259 NHSL1Q5SYE7 1610 aa23.22■■□□□ 1.31
SNX12-206ENST00000622259 CROCC2H7BZ55 1655 aa23.22■■□□□ 1.31
SNX12-206ENST00000622259 PNPLA6Q8IY17 1366 aa23.22■■□□□ 1.31
SNX12-206ENST00000622259 GCC2Q8IWJ2 1684 aa23.21■■□□□ 1.31
SNX12-206ENST00000622259 PTPRUQ92729 1446 aa23.2■■□□□ 1.3
SNX12-206ENST00000622259 KANK4Q5T7N3 995 aaPredicted RBP23.2■■□□□ 1.3
SNX12-206ENST00000622259 LRRC59Q96AG4 307 aaKnown RBP23.19■■□□□ 1.3
SNX12-206ENST00000622259 NGLY1Q96IV0 654 aa23.19■■□□□ 1.3
SNX12-206ENST00000622259 TMEM131LA2VDJ0 1609 aa23.19■■□□□ 1.3
SNX12-206ENST00000622259 MST1RQ04912 1400 aa23.18■■□□□ 1.3
SNX12-206ENST00000622259 ADAMTS2O95450 1211 aa23.18■■□□□ 1.3
SNX12-206ENST00000622259 AMOTL2Q9Y2J4 779 aa23.16■■□□□ 1.3
SNX12-206ENST00000622259 PIK3R4Q99570 1358 aa23.15■■□□□ 1.3
SNX12-206ENST00000622259 HDGFP51858 240 aaKnown RBP23.15■■□□□ 1.3
SNX12-206ENST00000622259 FOXD1Q16676 465 aa23.15■■□□□ 1.3
SNX12-206ENST00000622259 DCCP43146 1447 aa23.15■■□□□ 1.3
SNX12-206ENST00000622259 DAPK1P53355 1430 aa23.12■■□□□ 1.29
SNX12-206ENST00000622259 USP21Q9UK80 565 aa23.11■■□□□ 1.29
SNX12-206ENST00000622259 CHIC2Q9UKJ5 165 aa23.11■■□□□ 1.29
SNX12-206ENST00000622259 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.1■■□□□ 1.29
SNX12-206ENST00000622259 TRPC5Q9UL62 973 aaPredicted RBP23.1■■□□□ 1.29
SNX12-206ENST00000622259 TRPM2O94759 1503 aa23.09■■□□□ 1.29
SNX12-206ENST00000622259 CHGAP10645 457 aaKnown RBP23.09■■□□□ 1.29
SNX12-206ENST00000622259 RPRD2Q5VT52 1461 aaKnown RBP23.09■■□□□ 1.29
SNX12-206ENST00000622259 ATRNO75882 1429 aa23.08■■□□□ 1.28
SNX12-206ENST00000622259 PTPN23Q9H3S7 1636 aa23.07■■□□□ 1.28
SNX12-206ENST00000622259 ANKRD30AQ9BXX3 1397 aa23.05■■□□□ 1.28
SNX12-206ENST00000622259 CCDC125Q86Z20 511 aa23.05■■□□□ 1.28
SNX12-206ENST00000622259 FNBP4Q8N3X1 1017 aaPredicted RBP23.05■■□□□ 1.28
SNX12-206ENST00000622259 XRN1Q8IZH2 1706 aaKnown RBP23.05■■□□□ 1.28
SNX12-206ENST00000622259 UNC13BO14795 1591 aa23.03■■□□□ 1.28
SNX12-206ENST00000622259 LRP5O75197 1615 aa23■■□□□ 1.27
SNX12-206ENST00000622259 NRXN3Q9Y4C0 1643 aa23■■□□□ 1.27
SNX12-206ENST00000622259 VPS8Q8N3P4 1428 aa22.99■■□□□ 1.27
SNX12-206ENST00000622259 DEFB132Q7Z7B7 95 aa22.99■■□□□ 1.27
SNX12-206ENST00000622259 PTCH1Q13635 1447 aa22.98■■□□□ 1.27
SNX12-206ENST00000622259 ADGRL3Q9HAR2 1447 aa22.97■■□□□ 1.27
SNX12-206ENST00000622259 BCL9LQ86UU0 1499 aa22.97■■□□□ 1.27
SNX12-206ENST00000622259 NALCNQ8IZF0 1738 aa22.96■■□□□ 1.27
SNX12-206ENST00000622259 SOS2Q07890 1332 aaPredicted RBP22.96■■□□□ 1.27
SNX12-206ENST00000622259 C1orf167Q5SNV9 1468 aa22.96■■□□□ 1.27
SNX12-206ENST00000622259 LAMC1P11047 1609 aa22.96■■□□□ 1.27
SNX12-206ENST00000622259 METP08581 1390 aa22.95■■□□□ 1.26
SNX12-206ENST00000622259 BLMP54132 1417 aaPredicted RBP22.93■■□□□ 1.26
SNX12-206ENST00000622259 ORAI2Q96SN7 254 aa22.93■■□□□ 1.26
SNX12-206ENST00000622259 E9PCH4 1651 aa22.91■■□□□ 1.26
SNX12-206ENST00000622259 GJD4Q96KN9 370 aaPredicted RBP22.91■■□□□ 1.26
SNX12-206ENST00000622259 ADGRL2O95490 1459 aa22.91■■□□□ 1.26
SNX12-206ENST00000622259 ANKRD50Q9ULJ7 1429 aa22.91■■□□□ 1.26
SNX12-206ENST00000622259 COL22A1Q8NFW1 1626 aaPredicted RBP22.9■■□□□ 1.26
SNX12-206ENST00000622259 MYOM2P54296 1465 aa22.89■■□□□ 1.25
SNX12-206ENST00000622259 PSDA5PKW4 1024 aaPredicted RBP22.86■■□□□ 1.25
SNX12-206ENST00000622259 GLI3P10071 1580 aa22.85■■□□□ 1.25
SNX12-206ENST00000622259 BRWD3Q6RI45 1802 aa22.85■■□□□ 1.25
SNX12-206ENST00000622259 MARF1Q9Y4F3 1742 aaKnown RBP22.83■■□□□ 1.25
SNX12-206ENST00000622259 RALGAPBQ86X10 1494 aa22.83■■□□□ 1.25
SNX12-206ENST00000622259 HRCP23327 699 aa22.82■■□□□ 1.24
SNX12-206ENST00000622259 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.79■■□□□ 1.24
SNX12-206ENST00000622259 IQGAP3Q86VI3 1631 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms