RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 CUL7Q14999 1698 aa13.03□□□□□ -0.32
COL25A1-209ENST00000622134 DDX11L8A8MPP1 907 aa13.03□□□□□ -0.32
COL25A1-209ENST00000622134 IQGAP2Q13576 1575 aa13.03□□□□□ -0.32
COL25A1-209ENST00000622134 AKNAQ7Z591 1439 aa13.03□□□□□ -0.32
COL25A1-209ENST00000622134 NGEFQ8N5V2 710 aa13.02□□□□□ -0.32
COL25A1-209ENST00000622134 ZBED9Q6R2W3 1325 aa13.02□□□□□ -0.32
COL25A1-209ENST00000622134 LRRC9Q6ZRR7 1453 aa13.02□□□□□ -0.33
COL25A1-209ENST00000622134 TPM2P07951 284 aa13.01□□□□□ -0.33
COL25A1-209ENST00000622134 PDE3BQ13370 1112 aa13.01□□□□□ -0.33
COL25A1-209ENST00000622134 GOLGA6L6A8MZA4 724 aa13.01□□□□□ -0.33
COL25A1-209ENST00000622134 PEG3Q9GZU2 1588 aa13.01□□□□□ -0.33
COL25A1-209ENST00000622134 NRDCO43847 1150 aa13□□□□□ -0.33
COL25A1-209ENST00000622134 NFKBIBQ15653 356 aa13□□□□□ -0.33
COL25A1-209ENST00000622134 ARID3AQ99856 593 aa13□□□□□ -0.33
COL25A1-209ENST00000622134 PRXQ9BXM0 1461 aa13□□□□□ -0.33
COL25A1-209ENST00000622134 PDZRN4Q6ZMN7 1036 aaPredicted RBP13□□□□□ -0.33
COL25A1-209ENST00000622134 BRPF3Q9ULD4 1205 aa12.99□□□□□ -0.33
COL25A1-209ENST00000622134 ISY1Q9ULR0 285 aaKnown RBP12.99□□□□□ -0.33
COL25A1-209ENST00000622134 A0A0U1RQG5 324 aaPredicted RBP12.99□□□□□ -0.33
COL25A1-209ENST00000622134 RAPGEF3O95398 923 aa12.99□□□□□ -0.33
COL25A1-209ENST00000622134 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
COL25A1-209ENST00000622134 FAM161AQ3B820 660 aa12.99□□□□□ -0.33
COL25A1-209ENST00000622134 PLCB2Q00722 1185 aa12.99□□□□□ -0.33
COL25A1-209ENST00000622134 C9orf84Q5VXU9 1444 aa12.99□□□□□ -0.33
COL25A1-209ENST00000622134 SENP3-EIF4A1A0A087X0R7 540 aa12.98□□□□□ -0.33
COL25A1-209ENST00000622134 NEXNQ0ZGT2 675 aa12.98□□□□□ -0.33
COL25A1-209ENST00000622134 SKOR2Q2VWA4 1001 aaPredicted RBP12.98□□□□□ -0.33
COL25A1-209ENST00000622134 CHMP3Q9Y3E7 222 aa12.97□□□□□ -0.33
COL25A1-209ENST00000622134 ZNF644Q9H582 1327 aaPredicted RBP12.97□□□□□ -0.33
COL25A1-209ENST00000622134 KIAA1211Q6ZU35 1233 aa12.97□□□□□ -0.33
COL25A1-209ENST00000622134 SPRYD3Q8NCJ5 442 aa12.97□□□□□ -0.33
COL25A1-209ENST00000622134 FRAT2O75474 233 aaPredicted RBP12.96□□□□□ -0.33
COL25A1-209ENST00000622134 DENND4BO75064 1496 aaPredicted RBP12.96□□□□□ -0.33
COL25A1-209ENST00000622134 ST20-MTHFSA0A0A6YYL1 179 aa12.96□□□□□ -0.33
COL25A1-209ENST00000622134 DDX58O95786 925 aaKnown RBP12.96□□□□□ -0.33
COL25A1-209ENST00000622134 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
COL25A1-209ENST00000622134 CSPP1Q1MSJ5 1256 aa12.96□□□□□ -0.34
COL25A1-209ENST00000622134 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.34
COL25A1-209ENST00000622134 NLRP2Q9NX02 1062 aa12.95□□□□□ -0.34
COL25A1-209ENST00000622134 ANKRD30BQ9BXX2 1392 aa12.95□□□□□ -0.34
COL25A1-209ENST00000622134 NLRP6P59044 892 aa12.95□□□□□ -0.34
COL25A1-209ENST00000622134 SYAP1Q96A49 352 aaPredicted RBP12.95□□□□□ -0.34
COL25A1-209ENST00000622134 LRRFIP1Q32MZ4 808 aaKnown RBP12.94□□□□□ -0.34
COL25A1-209ENST00000622134 DIAPH1O60610 1272 aaKnown RBP12.94□□□□□ -0.34
COL25A1-209ENST00000622134 CENPQQ7L2Z9 268 aaPredicted RBP12.94□□□□□ -0.34
COL25A1-209ENST00000622134 SYTL4Q96C24 671 aaPredicted RBP12.94□□□□□ -0.34
COL25A1-209ENST00000622134 SMG6Q86US8 1419 aaKnown RBP12.93□□□□□ -0.34
COL25A1-209ENST00000622134 WWC1Q8IX03 1113 aa12.93□□□□□ -0.34
COL25A1-209ENST00000622134 FAM13BQ9NYF5 915 aa12.93□□□□□ -0.34
COL25A1-209ENST00000622134 EPRSP07814 1512 aaKnown RBP12.92□□□□□ -0.34
COL25A1-209ENST00000622134 ADGRL1O94910 1474 aa12.92□□□□□ -0.34
COL25A1-209ENST00000622134 URB2Q14146 1524 aaKnown RBP12.92□□□□□ -0.34
COL25A1-209ENST00000622134 MRE11P49959 708 aa12.92□□□□□ -0.34
COL25A1-209ENST00000622134 RWDD1Q9H446 243 aaPredicted RBP12.92□□□□□ -0.34
COL25A1-209ENST00000622134 USP47Q96K76 1375 aa12.92□□□□□ -0.34
COL25A1-209ENST00000622134 NOL10Q9BSC4 688 aaKnown RBP12.92□□□□□ -0.34
COL25A1-209ENST00000622134 NAP1L2Q9ULW6 460 aaPredicted RBP12.92□□□□□ -0.34
COL25A1-209ENST00000622134 PANK3Q9H999 370 aa12.91□□□□□ -0.34
COL25A1-209ENST00000622134 SMC4Q9NTJ3 1288 aa12.91□□□□□ -0.34
COL25A1-209ENST00000622134 SLC4A3P48751 1232 aa12.9□□□□□ -0.34
COL25A1-209ENST00000622134 ABTB2Q8N961 1025 aa12.9□□□□□ -0.34
COL25A1-209ENST00000622134 CCDC141Q6ZP82 1450 aa12.9□□□□□ -0.34
COL25A1-209ENST00000622134 MYBBP1AQ9BQG0 1328 aaKnown RBP12.9□□□□□ -0.34
COL25A1-209ENST00000622134 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
COL25A1-209ENST00000622134 RRP1P56182 461 aaKnown RBP12.89□□□□□ -0.35
COL25A1-209ENST00000622134 CHMP4CQ96CF2 233 aa12.89□□□□□ -0.35
COL25A1-209ENST00000622134 PLEKHO1Q53GL0 409 aaPredicted RBP12.88□□□□□ -0.35
COL25A1-209ENST00000622134 AMOTL1Q8IY63 956 aa12.88□□□□□ -0.35
COL25A1-209ENST00000622134 ZNF771Q7L3S4 317 aaPredicted RBP12.88□□□□□ -0.35
COL25A1-209ENST00000622134 TATP17735 454 aaPredicted RBP12.88□□□□□ -0.35
COL25A1-209ENST00000622134 ITPRIPQ8IWB1 547 aa12.87□□□□□ -0.35
COL25A1-209ENST00000622134 ROCK1Q13464 1354 aa12.87□□□□□ -0.35
COL25A1-209ENST00000622134 LRPPRCP42704 1394 aaKnown RBP12.87□□□□□ -0.35
COL25A1-209ENST00000622134 KIF14Q15058 1648 aa12.87□□□□□ -0.35
COL25A1-209ENST00000622134 DRC7Q8IY82 874 aa12.86□□□□□ -0.35
COL25A1-209ENST00000622134 PRDM11Q9NQV5 511 aa12.86□□□□□ -0.35
COL25A1-209ENST00000622134 PIP4K2BP78356 416 aa12.86□□□□□ -0.35
COL25A1-209ENST00000622134 GAS2L2Q8NHY3 880 aa12.86□□□□□ -0.35
COL25A1-209ENST00000622134 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
COL25A1-209ENST00000622134 DAPK1P53355 1430 aa12.85□□□□□ -0.35
COL25A1-209ENST00000622134 EXOC6Q8TAG9 804 aa12.85□□□□□ -0.35
COL25A1-209ENST00000622134 PRKRIP1Q9H875 184 aaPredicted RBP12.85□□□□□ -0.35
COL25A1-209ENST00000622134 CHMP5Q9NZZ3 219 aa12.85□□□□□ -0.35
COL25A1-209ENST00000622134 TOM1O60784 492 aa12.85□□□□□ -0.35
COL25A1-209ENST00000622134 NUTM2BA6NNL0 878 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-209ENST00000622134 NUTM2EB1AL46 878 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-209ENST00000622134 PHF14O94880 888 aa12.84□□□□□ -0.35
COL25A1-209ENST00000622134 GNL2Q13823 731 aaKnown RBP12.84□□□□□ -0.35
COL25A1-209ENST00000622134 NUTM2AQ8IVF1 878 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-209ENST00000622134 CCDC34Q96HJ3 373 aa12.84□□□□□ -0.35
COL25A1-209ENST00000622134 SUPT6HQ7KZ85 1726 aaKnown RBP12.84□□□□□ -0.35
COL25A1-209ENST00000622134 TRIM34Q9BYJ4 488 aa12.84□□□□□ -0.35
COL25A1-209ENST00000622134 ATAD2Q6PL18 1390 aa12.84□□□□□ -0.35
COL25A1-209ENST00000622134 GOLGA6L4A6NEF3 574 aa12.83□□□□□ -0.36
COL25A1-209ENST00000622134 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.36
COL25A1-209ENST00000622134 ZNF608Q9ULD9 1512 aaPredicted RBP12.83□□□□□ -0.36
COL25A1-209ENST00000622134 KLHL34Q8N239 644 aa12.83□□□□□ -0.36
COL25A1-209ENST00000622134 RBM33Q96EV2 1170 aaKnown RBP12.83□□□□□ -0.36
COL25A1-209ENST00000622134 PRAM1Q96QH2 718 aa12.83□□□□□ -0.36
COL25A1-209ENST00000622134 RTEL1-TNFRSF6BF6WH68 1400 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms