RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 TRAPPC8Q9Y2L5 1435 aa6.77□□□□□ -1.33
MATR3-228ENST00000620916 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.76□□□□□ -1.33
MATR3-228ENST00000620916 PLA2R1Q13018 1463 aa6.76□□□□□ -1.33
MATR3-228ENST00000620916 PLCH2O75038 1416 aa6.76□□□□□ -1.33
MATR3-228ENST00000620916 PLEKHD1A6NEE1 506 aa6.76□□□□□ -1.33
MATR3-228ENST00000620916 UTP14CQ5TAP6 766 aaKnown RBP6.76□□□□□ -1.33
MATR3-228ENST00000620916 SMAP1Q8IYB5 467 aaPredicted RBP6.76□□□□□ -1.33
MATR3-228ENST00000620916 NEFMP07197 916 aa6.76□□□□□ -1.33
MATR3-228ENST00000620916 ANP32BQ92688 251 aaKnown RBP6.76□□□□□ -1.33
MATR3-228ENST00000620916 MROH2AA6NES4 1674 aa6.75□□□□□ -1.33
MATR3-228ENST00000620916 ITSN2Q9NZM3 1697 aa6.75□□□□□ -1.33
MATR3-228ENST00000620916 CNPY4Q8N129 248 aa6.75□□□□□ -1.33
MATR3-228ENST00000620916 PUS7Q96PZ0 661 aaKnown RBP6.75□□□□□ -1.33
MATR3-228ENST00000620916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.75□□□□□ -1.33
MATR3-228ENST00000620916 ADGBQ8N7X0 1667 aa6.75□□□□□ -1.33
MATR3-228ENST00000620916 STK25O00506 426 aa6.75□□□□□ -1.33
MATR3-228ENST00000620916 PAK3O75914 559 aaPredicted RBP6.75□□□□□ -1.33
MATR3-228ENST00000620916 IPO9Q96P70 1041 aaKnown RBP6.75□□□□□ -1.33
MATR3-228ENST00000620916 KDM5CP41229 1560 aa6.75□□□□□ -1.33
MATR3-228ENST00000620916 ZNF518AQ6AHZ1 1483 aa6.75□□□□□ -1.33
MATR3-228ENST00000620916 FYCO1Q9BQS8 1478 aa6.75□□□□□ -1.33
MATR3-228ENST00000620916 SUPT5HO00267 1087 aaKnown RBP6.74□□□□□ -1.33
MATR3-228ENST00000620916 CLGNO14967 610 aa6.74□□□□□ -1.33
MATR3-228ENST00000620916 RGS22Q8NE09 1264 aa6.74□□□□□ -1.33
MATR3-228ENST00000620916 NUP153P49790 1475 aaKnown RBP6.74□□□□□ -1.33
MATR3-228ENST00000620916 MCCP23508 829 aa6.74□□□□□ -1.33
MATR3-228ENST00000620916 RGS3P49796 1198 aa6.74□□□□□ -1.33
MATR3-228ENST00000620916 SSUH2Q9Y2M2 353 aa6.74□□□□□ -1.33
MATR3-228ENST00000620916 PTMAP06454 111 aaKnown RBP6.74□□□□□ -1.33
MATR3-228ENST00000620916 GSE1Q14687 1217 aa6.74□□□□□ -1.33
MATR3-228ENST00000620916 POLR1AO95602 1720 aaPredicted RBP6.73□□□□□ -1.33
MATR3-228ENST00000620916 SIGLEC1Q9BZZ2 1709 aa6.73□□□□□ -1.33
MATR3-228ENST00000620916 MLH3Q9UHC1 1453 aa6.73□□□□□ -1.33
MATR3-228ENST00000620916 TMEM51Q9NW97 253 aa6.73□□□□□ -1.33
MATR3-228ENST00000620916 STAG3Q9UJ98 1225 aa6.73□□□□□ -1.33
MATR3-228ENST00000620916 CPS1P31327 1500 aa6.73□□□□□ -1.33
MATR3-228ENST00000620916 SCAPERQ9BY12 1400 aa6.72□□□□□ -1.33
MATR3-228ENST00000620916 ZNF142P52746 1687 aaPredicted RBP6.72□□□□□ -1.33
MATR3-228ENST00000620916 MED1Q15648 1581 aaPredicted RBP6.72□□□□□ -1.33
MATR3-228ENST00000620916 C3P01024 1663 aa6.72□□□□□ -1.33
MATR3-228ENST00000620916 IRX6P78412 446 aaPredicted RBP6.72□□□□□ -1.33
MATR3-228ENST00000620916 AXDND1Q5T1B0 1012 aaPredicted RBP6.72□□□□□ -1.33
MATR3-228ENST00000620916 EFCAB2Q5VUJ9 269 aa6.72□□□□□ -1.33
MATR3-228ENST00000620916 TCOF1Q13428 1488 aaKnown RBP6.71□□□□□ -1.33
MATR3-228ENST00000620916 TPM2P07951 284 aa6.71□□□□□ -1.34
MATR3-228ENST00000620916 MAP7D2Q96T17 732 aa6.71□□□□□ -1.34
MATR3-228ENST00000620916 CCDC18Q5T9S5 1454 aa6.71□□□□□ -1.34
MATR3-228ENST00000620916 ZNF622Q969S3 477 aaKnown RBP eCLIP6.71□□□□□ -1.342e-13■□□□□ 9.5
MATR3-228ENST00000620916 ZNF830Q96NB3 372 aaPredicted RBP6.71□□□□□ -1.34
MATR3-228ENST00000620916 KCNG1Q9UIX4 513 aa6.71□□□□□ -1.34
MATR3-228ENST00000620916 POLR3GLQ9BT43 218 aa6.7□□□□□ -1.34
MATR3-228ENST00000620916 MYO5CQ9NQX4 1742 aa6.7□□□□□ -1.34
MATR3-228ENST00000620916 CLCN1P35523 988 aa6.7□□□□□ -1.34
MATR3-228ENST00000620916 PTPRKQ15262 1439 aa6.7□□□□□ -1.34
MATR3-228ENST00000620916 KDM5DQ9BY66 1539 aa6.69□□□□□ -1.34
MATR3-228ENST00000620916 DIP2CQ9Y2E4 1556 aa6.69□□□□□ -1.34
MATR3-228ENST00000620916 IGSF3O75054 1194 aa6.69□□□□□ -1.34
MATR3-228ENST00000620916 DSG3P32926 999 aa6.69□□□□□ -1.34
MATR3-228ENST00000620916 ANP32AP39687 249 aaKnown RBP6.69□□□□□ -1.34
MATR3-228ENST00000620916 ZBTB47Q9UFB7 747 aaPredicted RBP6.69□□□□□ -1.34
MATR3-228ENST00000620916 ARHGEF5Q12774 1597 aa6.69□□□□□ -1.34
MATR3-228ENST00000620916 WWC1Q8IX03 1113 aa6.69□□□□□ -1.34
MATR3-228ENST00000620916 ESF1Q9H501 851 aaKnown RBP6.69□□□□□ -1.34
MATR3-228ENST00000620916 KDM5AP29375 1690 aaKnown RBP6.69□□□□□ -1.34
MATR3-228ENST00000620916 CAMSAP1Q5T5Y3 1602 aa6.68□□□□□ -1.34
MATR3-228ENST00000620916 TOM1O60784 492 aa6.68□□□□□ -1.34
MATR3-228ENST00000620916 PHF14O94880 888 aa6.68□□□□□ -1.34
MATR3-228ENST00000620916 SETQ01105 290 aaPredicted RBP6.68□□□□□ -1.34
MATR3-228ENST00000620916 TAF3Q5VWG9 929 aa6.68□□□□□ -1.34
MATR3-228ENST00000620916 CADPS2Q86UW7 1296 aa6.68□□□□□ -1.34
MATR3-228ENST00000620916 EIF2AK4Q9P2K8 1649 aaKnown RBP6.68□□□□□ -1.34
MATR3-228ENST00000620916 UBAP1LF5GYI3 381 aa6.68□□□□□ -1.34
MATR3-228ENST00000620916 SLC20A2Q08357 652 aa6.68□□□□□ -1.34
MATR3-228ENST00000620916 PLCD4Q9BRC7 762 aa6.68□□□□□ -1.34
MATR3-228ENST00000620916 IRX3P78415 501 aaPredicted RBP6.67□□□□□ -1.34
MATR3-228ENST00000620916 KCNV2Q8TDN2 545 aa6.67□□□□□ -1.34
MATR3-228ENST00000620916 PTPN23Q9H3S7 1636 aa6.67□□□□□ -1.34
MATR3-228ENST00000620916 LAMC1P11047 1609 aa6.67□□□□□ -1.34
MATR3-228ENST00000620916 SPDYE2BA6NHP3 402 aa6.67□□□□□ -1.34
MATR3-228ENST00000620916 SPDYE6P0CI01 402 aa6.67□□□□□ -1.34
MATR3-228ENST00000620916 PTMSP20962 102 aa6.67□□□□□ -1.34
MATR3-228ENST00000620916 SPDYE2Q495Y8 402 aa6.67□□□□□ -1.34
MATR3-228ENST00000620916 TIAM1Q13009 1591 aa6.67□□□□□ -1.34
MATR3-228ENST00000620916 DCAF8Q5TAQ9 597 aa6.67□□□□□ -1.34
MATR3-228ENST00000620916 ZBTB12Q9Y330 459 aaPredicted RBP6.67□□□□□ -1.34
MATR3-228ENST00000620916 FAM193AP78312 1265 aa6.66□□□□□ -1.34
MATR3-228ENST00000620916 PLXNC1O60486 1568 aa6.66□□□□□ -1.34
MATR3-228ENST00000620916 EHBP1L1Q8N3D4 1523 aa6.66□□□□□ -1.34
MATR3-228ENST00000620916 STK24Q9Y6E0 443 aa6.66□□□□□ -1.34
MATR3-228ENST00000620916 RIOK3O14730 519 aaKnown RBP6.65□□□□□ -1.34
MATR3-228ENST00000620916 KIF20AO95235 890 aa6.65□□□□□ -1.34
MATR3-228ENST00000620916 PNNQ9H307 717 aaKnown RBP6.65□□□□□ -1.34
MATR3-228ENST00000620916 KIF14Q15058 1648 aa6.65□□□□□ -1.34
MATR3-228ENST00000620916 NUBP1P53384 320 aa6.65□□□□□ -1.34
MATR3-228ENST00000620916 MLECQ14165 292 aa6.65□□□□□ -1.34
MATR3-228ENST00000620916 RRAGDQ9NQL2 400 aaPredicted RBP6.65□□□□□ -1.34
MATR3-228ENST00000620916 ITGAEP38570 1179 aa6.65□□□□□ -1.35
MATR3-228ENST00000620916 PSEN1P49768 467 aa6.65□□□□□ -1.35
MATR3-228ENST00000620916 DMTNQ08495 405 aa6.65□□□□□ -1.35
MATR3-228ENST00000620916 CEP120Q8N960 986 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms