RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 ABCA9Q8IUA7 1624 aa10.75□□□□□ -0.69
GDNF-208ENST00000620847 MYOM1P52179 1685 aa10.75□□□□□ -0.69
GDNF-208ENST00000620847 CDCA7LQ96GN5 454 aa10.75□□□□□ -0.69
GDNF-208ENST00000620847 STAC3Q96MF2 364 aa10.75□□□□□ -0.69
GDNF-208ENST00000620847 NEURL4Q96JN8 1562 aa10.75□□□□□ -0.69
GDNF-208ENST00000620847 SCAF11Q99590 1463 aaKnown RBP10.74□□□□□ -0.69
GDNF-208ENST00000620847 ANO8Q9HCE9 1232 aaPredicted RBP10.74□□□□□ -0.69
GDNF-208ENST00000620847 ATP7AQ04656 1500 aa10.74□□□□□ -0.69
GDNF-208ENST00000620847 AFAP1Q8N556 730 aa10.73□□□□□ -0.69
GDNF-208ENST00000620847 MROH1Q8NDA8 1641 aa10.71□□□□□ -0.69
GDNF-208ENST00000620847 AMER1Q5JTC6 1135 aaPredicted RBP10.71□□□□□ -0.69
GDNF-208ENST00000620847 ASXL1Q8IXJ9 1541 aa10.71□□□□□ -0.7
GDNF-208ENST00000620847 KDM5AP29375 1690 aaKnown RBP10.71□□□□□ -0.7
GDNF-208ENST00000620847 FANCAO15360 1455 aa10.71□□□□□ -0.7
GDNF-208ENST00000620847 PPP2R1AP30153 589 aa10.7□□□□□ -0.7
GDNF-208ENST00000620847 CDCA8Q53HL2 280 aa10.7□□□□□ -0.7
GDNF-208ENST00000620847 ADAMTS8Q9UP79 889 aa10.7□□□□□ -0.7
GDNF-208ENST00000620847 KNSTRNQ9Y448 316 aa10.7□□□□□ -0.7
GDNF-208ENST00000620847 IFT172Q9UG01 1749 aa10.7□□□□□ -0.7
GDNF-208ENST00000620847 MAP3K4Q9Y6R4 1608 aa10.7□□□□□ -0.7
GDNF-208ENST00000620847 KANK1Q14678 1352 aa10.69□□□□□ -0.7
GDNF-208ENST00000620847 TCERG1O14776 1098 aaKnown RBP10.69□□□□□ -0.7
GDNF-208ENST00000620847 KIF1BO60333 1816 aa10.69□□□□□ -0.7
GDNF-208ENST00000620847 NPC1L1Q9UHC9 1359 aa10.69□□□□□ -0.7
GDNF-208ENST00000620847 PIK3C2GO75747 1445 aa10.69□□□□□ -0.7
GDNF-208ENST00000620847 MYOM2P54296 1465 aa10.69□□□□□ -0.7
GDNF-208ENST00000620847 ABCA6Q8N139 1617 aa10.69□□□□□ -0.7
GDNF-208ENST00000620847 EIF3AQ14152 1382 aaKnown RBP10.68□□□□□ -0.7
GDNF-208ENST00000620847 PLIN1O60240 522 aa10.67□□□□□ -0.7
GDNF-208ENST00000620847 ADGRL1O94910 1474 aa10.67□□□□□ -0.7
GDNF-208ENST00000620847 PLEKHH1Q9ULM0 1364 aa10.67□□□□□ -0.7
GDNF-208ENST00000620847 ZNF521Q96K83 1311 aa10.67□□□□□ -0.7
GDNF-208ENST00000620847 EFCAB6Q5THR3 1501 aa10.67□□□□□ -0.7
GDNF-208ENST00000620847 MROH2AA6NES4 1674 aa10.66□□□□□ -0.7
GDNF-208ENST00000620847 UGGT1Q9NYU2 1555 aa10.66□□□□□ -0.7
GDNF-208ENST00000620847 MS4A1P11836 297 aa10.66□□□□□ -0.7
GDNF-208ENST00000620847 MYO3AQ8NEV4 1616 aa10.66□□□□□ -0.7
GDNF-208ENST00000620847 KIDINS220Q9ULH0 1771 aa10.66□□□□□ -0.7
GDNF-208ENST00000620847 USP35Q9P2H5 1018 aa10.66□□□□□ -0.7
GDNF-208ENST00000620847 KIF3BO15066 747 aa10.65□□□□□ -0.7
GDNF-208ENST00000620847 WDR43Q15061 677 aaKnown RBP eCLIP10.65□□□□□ -0.7
GDNF-208ENST00000620847 CRBNQ96SW2 442 aa10.65□□□□□ -0.7
GDNF-208ENST00000620847 ERVK-7P63135 1459 aa10.65□□□□□ -0.7
GDNF-208ENST00000620847 PPRC1Q5VV67 1664 aaKnown RBP10.65□□□□□ -0.7
GDNF-208ENST00000620847 DUSP27Q5VZP5 1158 aa10.65□□□□□ -0.71
GDNF-208ENST00000620847 IL27Q8NEV9 243 aa10.65□□□□□ -0.71
GDNF-208ENST00000620847 NRXN1Q9ULB1 1477 aa10.64□□□□□ -0.71
GDNF-208ENST00000620847 LMTK2Q8IWU2 1503 aa10.64□□□□□ -0.71
GDNF-208ENST00000620847 PDE4AP27815 886 aa10.64□□□□□ -0.71
GDNF-208ENST00000620847 BACH2Q9BYV9 841 aa10.64□□□□□ -0.71
GDNF-208ENST00000620847 SLC24A1O60721 1099 aa10.63□□□□□ -0.71
GDNF-208ENST00000620847 NEFMP07197 916 aa10.63□□□□□ -0.71
GDNF-208ENST00000620847 CFAP70Q5T0N1 1121 aa10.63□□□□□ -0.71
GDNF-208ENST00000620847 NPM2Q86SE8 214 aaKnown RBP10.63□□□□□ -0.71
GDNF-208ENST00000620847 RTN4Q9NQC3 1192 aaKnown RBP10.63□□□□□ -0.71
GDNF-208ENST00000620847 ADGRF5Q8IZF2 1346 aa10.62□□□□□ -0.71
GDNF-208ENST00000620847 PPM1GO15355 546 aaPredicted RBP10.62□□□□□ -0.71
GDNF-208ENST00000620847 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
GDNF-208ENST00000620847 C20orf194Q5TEA3 1177 aa10.62□□□□□ -0.71
GDNF-208ENST00000620847 SETBP1Q9Y6X0 1596 aa10.62□□□□□ -0.71
GDNF-208ENST00000620847 ASXL2Q76L83 1435 aa10.61□□□□□ -0.71
GDNF-208ENST00000620847 ADGRB3O60242 1522 aa10.61□□□□□ -0.71
GDNF-208ENST00000620847 TRMT2AQ8IZ69 625 aaKnown RBP10.61□□□□□ -0.71
GDNF-208ENST00000620847 ZC3H13Q5T200 1668 aaKnown RBP10.61□□□□□ -0.71
GDNF-208ENST00000620847 SBNO2Q9Y2G9 1366 aa10.61□□□□□ -0.71
GDNF-208ENST00000620847 SLFN5Q08AF3 891 aa10.6□□□□□ -0.71
GDNF-208ENST00000620847 KDM2BQ8NHM5 1336 aa10.6□□□□□ -0.71
GDNF-208ENST00000620847 PPLO60437 1756 aa10.6□□□□□ -0.71
GDNF-208ENST00000620847 ZNF518AQ6AHZ1 1483 aa10.6□□□□□ -0.71
GDNF-208ENST00000620847 CARD14Q9BXL6 1004 aa10.59□□□□□ -0.71
GDNF-208ENST00000620847 LAS1LQ9Y4W2 734 aaKnown RBP10.59□□□□□ -0.71
GDNF-208ENST00000620847 CCDC146Q8IYE0 955 aa10.58□□□□□ -0.72
GDNF-208ENST00000620847 QRICH2Q9H0J4 1663 aa10.58□□□□□ -0.72
GDNF-208ENST00000620847 NKTRP30414 1462 aaKnown RBP10.57□□□□□ -0.72
GDNF-208ENST00000620847 NOS1P29475 1434 aa10.57□□□□□ -0.72
GDNF-208ENST00000620847 FRMPD1Q5SYB0 1578 aa10.57□□□□□ -0.72
GDNF-208ENST00000620847 CFAP74Q9C0B2 1584 aa10.57□□□□□ -0.72
GDNF-208ENST00000620847 SHPRHQ149N8 1683 aa10.57□□□□□ -0.72
GDNF-208ENST00000620847 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.57□□□□□ -0.72
GDNF-208ENST00000620847 CENPQQ7L2Z9 268 aaPredicted RBP10.57□□□□□ -0.72
GDNF-208ENST00000620847 SKAP1Q86WV1 359 aa10.57□□□□□ -0.72
GDNF-208ENST00000620847 APAF1O14727 1248 aa10.56□□□□□ -0.72
GDNF-208ENST00000620847 SPINK5Q9NQ38 1064 aaPredicted RBP10.56□□□□□ -0.72
GDNF-208ENST00000620847 ADGRB1O14514 1584 aa10.56□□□□□ -0.72
GDNF-208ENST00000620847 POLR3AO14802 1390 aaPredicted RBP10.56□□□□□ -0.72
GDNF-208ENST00000620847 NGEFQ8N5V2 710 aa10.56□□□□□ -0.72
GDNF-208ENST00000620847 NPATQ14207 1427 aa10.56□□□□□ -0.72
GDNF-208ENST00000620847 CFAP65Q6ZU64 1925 aaKnown RBP10.55□□□□□ -0.72
GDNF-208ENST00000620847 USP32Q8NFA0 1604 aa10.55□□□□□ -0.72
GDNF-208ENST00000620847 HECW2Q9P2P5 1572 aa10.55□□□□□ -0.72
GDNF-208ENST00000620847 CENPJQ9HC77 1338 aaPredicted RBP10.55□□□□□ -0.72
GDNF-208ENST00000620847 MLH3Q9UHC1 1453 aa10.55□□□□□ -0.72
GDNF-208ENST00000620847 POGZQ7Z3K3 1410 aa10.55□□□□□ -0.72
GDNF-208ENST00000620847 E9PSI1 815 aa10.54□□□□□ -0.72
GDNF-208ENST00000620847 DDRGK1Q96HY6 314 aa10.54□□□□□ -0.72
GDNF-208ENST00000620847 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.54□□□□□ -0.72
GDNF-208ENST00000620847 C14orf93Q9H972 538 aaKnown RBP10.54□□□□□ -0.72
GDNF-208ENST00000620847 SIGLEC1Q9BZZ2 1709 aa10.52□□□□□ -0.72
GDNF-208ENST00000620847 DMRT2Q9Y5R5 561 aa10.52□□□□□ -0.72
GDNF-208ENST00000620847 NSD3Q9BZ95 1437 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms