RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 MBD5Q9P267 1494 aa10.2□□□□□ -0.78
BRCC3-209ENST00000620502 HECW2Q9P2P5 1572 aa10.2□□□□□ -0.78
BRCC3-209ENST00000620502 KIDINS220Q9ULH0 1771 aa10.2□□□□□ -0.78
BRCC3-209ENST00000620502 NLRP6P59044 892 aa10.19□□□□□ -0.78
BRCC3-209ENST00000620502 ABCA6Q8N139 1617 aa10.18□□□□□ -0.78
BRCC3-209ENST00000620502 DIP2CQ9Y2E4 1556 aa10.18□□□□□ -0.78
BRCC3-209ENST00000620502 CAMSAP2Q08AD1 1489 aa10.18□□□□□ -0.78
BRCC3-209ENST00000620502 MYOM3Q5VTT5 1437 aa10.18□□□□□ -0.78
BRCC3-209ENST00000620502 DPY19L2Q6NUT2 758 aa10.18□□□□□ -0.78
BRCC3-209ENST00000620502 BCORL1Q5H9F3 1711 aa10.18□□□□□ -0.78
BRCC3-209ENST00000620502 ADAMTSL3P82987 1691 aa10.18□□□□□ -0.78
BRCC3-209ENST00000620502 C9orf84Q5VXU9 1444 aa10.16□□□□□ -0.78
BRCC3-209ENST00000620502 MIA2Q96PC5 1412 aa10.16□□□□□ -0.78
BRCC3-209ENST00000620502 SPAG9O60271 1321 aaKnown RBP10.16□□□□□ -0.78
BRCC3-209ENST00000620502 ARID4BQ4LE39 1312 aaPredicted RBP10.16□□□□□ -0.78
BRCC3-209ENST00000620502 PLSCR2Q9NRY7 297 aa10.16□□□□□ -0.78
BRCC3-209ENST00000620502 MYT1LQ9UL68 1186 aa10.16□□□□□ -0.78
BRCC3-209ENST00000620502 REREQ9P2R6 1566 aa10.16□□□□□ -0.78
BRCC3-209ENST00000620502 INO80Q9ULG1 1556 aaPredicted RBP10.16□□□□□ -0.78
BRCC3-209ENST00000620502 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.78
BRCC3-209ENST00000620502 ATP7AQ04656 1500 aa10.15□□□□□ -0.78
BRCC3-209ENST00000620502 ARHGEF5Q12774 1597 aa10.14□□□□□ -0.79
BRCC3-209ENST00000620502 RSPH4AQ5TD94 716 aa10.14□□□□□ -0.79
BRCC3-209ENST00000620502 CCDC141Q6ZP82 1450 aa10.13□□□□□ -0.79
BRCC3-209ENST00000620502 RTEL1-TNFRSF6BF6WH68 1400 aa10.13□□□□□ -0.79
BRCC3-209ENST00000620502 AGLP35573 1532 aa10.12□□□□□ -0.79
BRCC3-209ENST00000620502 MADDQ8WXG6 1647 aa10.12□□□□□ -0.79
BRCC3-209ENST00000620502 PTPN23Q9H3S7 1636 aa10.12□□□□□ -0.79
BRCC3-209ENST00000620502 L3MBTL3Q96JM7 780 aaPredicted RBP10.12□□□□□ -0.79
BRCC3-209ENST00000620502 FGD6Q6ZV73 1430 aa10.12□□□□□ -0.79
BRCC3-209ENST00000620502 ADGBQ8N7X0 1667 aa10.12□□□□□ -0.79
BRCC3-209ENST00000620502 TCOF1Q13428 1488 aaKnown RBP10.11□□□□□ -0.79
BRCC3-209ENST00000620502 GTPBP6O43824 516 aaPredicted RBP10.11□□□□□ -0.79
BRCC3-209ENST00000620502 PLXNC1O60486 1568 aa10.1□□□□□ -0.79
BRCC3-209ENST00000620502 MAST1Q9Y2H9 1570 aa10.1□□□□□ -0.79
BRCC3-209ENST00000620502 RIMS1Q86UR5 1692 aaKnown RBP10.1□□□□□ -0.79
BRCC3-209ENST00000620502 MLECQ14165 292 aa10.1□□□□□ -0.79
BRCC3-209ENST00000620502 PPARGC1BQ86YN6 1023 aaKnown RBP10.1□□□□□ -0.79
BRCC3-209ENST00000620502 BOLA1Q9Y3E2 137 aa10.1□□□□□ -0.79
BRCC3-209ENST00000620502 A2MP01023 1474 aa10.1□□□□□ -0.79
BRCC3-209ENST00000620502 PTPRMP28827 1452 aa10.1□□□□□ -0.79
BRCC3-209ENST00000620502 FER1L4A9Z1Z3 1794 aa10.09□□□□□ -0.79
BRCC3-209ENST00000620502 TSPY4P0CV99 314 aa10.09□□□□□ -0.79
BRCC3-209ENST00000620502 TSPY10P0CW01 314 aa10.09□□□□□ -0.79
BRCC3-209ENST00000620502 OTUD5Q96G74 571 aa10.09□□□□□ -0.79
BRCC3-209ENST00000620502 TMEM121BQ9BXQ6 578 aaPredicted RBP10.09□□□□□ -0.79
BRCC3-209ENST00000620502 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
BRCC3-209ENST00000620502 ABCC5O15440 1437 aa10.08□□□□□ -0.8
BRCC3-209ENST00000620502 PPP1R37O75864 691 aa10.08□□□□□ -0.8
BRCC3-209ENST00000620502 MAMSTRQ6ZN01 415 aa10.08□□□□□ -0.8
BRCC3-209ENST00000620502 CROCC2H7BZ55 1655 aa10.08□□□□□ -0.8
BRCC3-209ENST00000620502 DNMT1P26358 1616 aaKnown RBP10.07□□□□□ -0.8
BRCC3-209ENST00000620502 DHX29Q7Z478 1369 aaKnown RBP10.07□□□□□ -0.8
BRCC3-209ENST00000620502 DAPK1P53355 1430 aa10.07□□□□□ -0.8
BRCC3-209ENST00000620502 MICALL2Q8IY33 904 aa10.06□□□□□ -0.8
BRCC3-209ENST00000620502 SCUBE2Q9NQ36 999 aa10.05□□□□□ -0.8
BRCC3-209ENST00000620502 SHANK2Q9UPX8 1470 aa10.04□□□□□ -0.8
BRCC3-209ENST00000620502 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.04□□□□□ -0.8
BRCC3-209ENST00000620502 G3V3G9 751 aa10.03□□□□□ -0.8
BRCC3-209ENST00000620502 CEBPAP49715 358 aaPredicted RBP10.03□□□□□ -0.8
BRCC3-209ENST00000620502 FAM50AQ14320 339 aaKnown RBP10.03□□□□□ -0.8
BRCC3-209ENST00000620502 C3P01024 1663 aa10.02□□□□□ -0.8
BRCC3-209ENST00000620502 KIF3BO15066 747 aa10.02□□□□□ -0.81
BRCC3-209ENST00000620502 GGT6Q6P531 493 aa10.02□□□□□ -0.81
BRCC3-209ENST00000620502 CLTCQ00610 1675 aaKnown RBP10.02□□□□□ -0.81
BRCC3-209ENST00000620502 DUOX2Q9NRD8 1548 aa10.02□□□□□ -0.81
BRCC3-209ENST00000620502 PTPRKQ15262 1439 aa10.01□□□□□ -0.81
BRCC3-209ENST00000620502 RRP7BPQ9NSQ0 103 aa10.01□□□□□ -0.81
BRCC3-209ENST00000620502 CHIC2Q9UKJ5 165 aa10.01□□□□□ -0.81
BRCC3-209ENST00000620502 MROH2AA6NES4 1674 aa10.01□□□□□ -0.81
BRCC3-209ENST00000620502 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.01□□□□□ -0.81
BRCC3-209ENST00000620502 EIF2AK4Q9P2K8 1649 aaKnown RBP10□□□□□ -0.81
BRCC3-209ENST00000620502 NCOA1Q15788 1441 aa10□□□□□ -0.81
BRCC3-209ENST00000620502 CNTLNQ9NXG0 1405 aa10□□□□□ -0.81
BRCC3-209ENST00000620502 C3orf67Q6ZVT6 689 aa10□□□□□ -0.81
BRCC3-209ENST00000620502 SPRYD3Q8NCJ5 442 aa10□□□□□ -0.81
BRCC3-209ENST00000620502 EIF2AK3Q9NZJ5 1116 aaKnown RBP10□□□□□ -0.81
BRCC3-209ENST00000620502 RNF17Q9BXT8 1623 aaKnown RBP10□□□□□ -0.81
BRCC3-209ENST00000620502 KIF15Q9NS87 1388 aa10□□□□□ -0.81
BRCC3-209ENST00000620502 ADGRL2O95490 1459 aa9.99□□□□□ -0.81
BRCC3-209ENST00000620502 ESF1Q9H501 851 aaKnown RBP9.99□□□□□ -0.81
BRCC3-209ENST00000620502 ZMYM3Q14202 1370 aa9.99□□□□□ -0.81
BRCC3-209ENST00000620502 ANKRD30AQ9BXX3 1397 aa9.99□□□□□ -0.81
BRCC3-209ENST00000620502 RRBP1Q9P2E9 1410 aaKnown RBP9.99□□□□□ -0.81
BRCC3-209ENST00000620502 MROH1Q8NDA8 1641 aa9.98□□□□□ -0.81
BRCC3-209ENST00000620502 ERBINQ96RT1 1412 aa9.98□□□□□ -0.81
BRCC3-209ENST00000620502 LMTK3Q96Q04 1460 aa9.98□□□□□ -0.81
BRCC3-209ENST00000620502 PAXIP1Q6ZW49 1069 aaPredicted RBP9.97□□□□□ -0.81
BRCC3-209ENST00000620502 PREX1Q8TCU6 1659 aa9.96□□□□□ -0.81
BRCC3-209ENST00000620502 SLAIN1Q8ND83 568 aa9.96□□□□□ -0.82
BRCC3-209ENST00000620502 KDM5DQ9BY66 1539 aa9.96□□□□□ -0.82
BRCC3-209ENST00000620502 FAM135AQ9P2D6 1515 aa9.96□□□□□ -0.82
BRCC3-209ENST00000620502 DEPDC5O75140 1603 aa9.96□□□□□ -0.82
BRCC3-209ENST00000620502 ITGAEP38570 1179 aa9.95□□□□□ -0.82
BRCC3-209ENST00000620502 TMEM92Q6UXU6 159 aa9.95□□□□□ -0.82
BRCC3-209ENST00000620502 CFAP44Q96MT7 982 aa9.95□□□□□ -0.82
BRCC3-209ENST00000620502 WASHC2CQ9Y4E1 1318 aa9.95□□□□□ -0.82
BRCC3-209ENST00000620502 ROCK1Q13464 1354 aa9.95□□□□□ -0.82
BRCC3-209ENST00000620502 SETD1BQ9UPS6 1966 aaKnown RBP9.94□□□□□ -0.82
BRCC3-209ENST00000620502 ZC3H13Q5T200 1668 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms