RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 ASXL1Q8IXJ9 1541 aa17.38■□□□□ 0.37
SKP2-209ENST00000620197 MROH1Q8NDA8 1641 aa17.38■□□□□ 0.37
SKP2-209ENST00000620197 ZBTB47Q9UFB7 747 aaPredicted RBP17.38■□□□□ 0.37
SKP2-209ENST00000620197 ZC3H13Q5T200 1668 aaKnown RBP17.37■□□□□ 0.37
SKP2-209ENST00000620197 PANK3Q9H999 370 aa17.37■□□□□ 0.37
SKP2-209ENST00000620197 PLEKHH1Q9ULM0 1364 aa17.37■□□□□ 0.37
SKP2-209ENST00000620197 RTEL1-TNFRSF6BF6WH68 1400 aa17.36■□□□□ 0.37
SKP2-209ENST00000620197 CNGB1Q14028 1251 aaPredicted RBP17.36■□□□□ 0.37
SKP2-209ENST00000620197 SCAF11Q99590 1463 aaKnown RBP17.36■□□□□ 0.37
SKP2-209ENST00000620197 ABCA9Q8IUA7 1624 aa17.35■□□□□ 0.37
SKP2-209ENST00000620197 ABCA6Q8N139 1617 aa17.34■□□□□ 0.37
SKP2-209ENST00000620197 AMER1Q5JTC6 1135 aaPredicted RBP17.34■□□□□ 0.37
SKP2-209ENST00000620197 TRMT2AQ8IZ69 625 aaKnown RBP17.34■□□□□ 0.37
SKP2-209ENST00000620197 SHPRHQ149N8 1683 aa17.34■□□□□ 0.37
SKP2-209ENST00000620197 MAP3K4Q9Y6R4 1608 aa17.34■□□□□ 0.37
SKP2-209ENST00000620197 TMF1P82094 1093 aa17.33■□□□□ 0.36
SKP2-209ENST00000620197 FBLN2P98095 1184 aa17.33■□□□□ 0.36
SKP2-209ENST00000620197 MYOM2P54296 1465 aa17.32■□□□□ 0.36
SKP2-209ENST00000620197 NRXN1Q9ULB1 1477 aa17.32■□□□□ 0.36
SKP2-209ENST00000620197 USP35Q9P2H5 1018 aa17.32■□□□□ 0.36
SKP2-209ENST00000620197 DUSP27Q5VZP5 1158 aa17.32■□□□□ 0.36
SKP2-209ENST00000620197 CRBNQ96SW2 442 aa17.31■□□□□ 0.36
SKP2-209ENST00000620197 TRAPPC8Q9Y2L5 1435 aa17.31■□□□□ 0.36
SKP2-209ENST00000620197 MROH2AA6NES4 1674 aa17.3■□□□□ 0.36
SKP2-209ENST00000620197 ADAMTS8Q9UP79 889 aa17.29■□□□□ 0.36
SKP2-209ENST00000620197 PPP2R1AP30153 589 aa17.29■□□□□ 0.36
SKP2-209ENST00000620197 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
SKP2-209ENST00000620197 STAC3Q96MF2 364 aa17.29■□□□□ 0.36
SKP2-209ENST00000620197 USP32Q8NFA0 1604 aa17.29■□□□□ 0.36
SKP2-209ENST00000620197 KIF1BO60333 1816 aa17.28■□□□□ 0.36
SKP2-209ENST00000620197 PLIN1O60240 522 aa17.28■□□□□ 0.36
SKP2-209ENST00000620197 RGL3Q3MIN7 710 aa17.27■□□□□ 0.36
SKP2-209ENST00000620197 C20orf194Q5TEA3 1177 aa17.27■□□□□ 0.36
SKP2-209ENST00000620197 ERVK-7P63135 1459 aa17.27■□□□□ 0.35
SKP2-209ENST00000620197 SETBP1Q9Y6X0 1596 aa17.26■□□□□ 0.35
SKP2-209ENST00000620197 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
SKP2-209ENST00000620197 ATP7AQ04656 1500 aa17.24■□□□□ 0.35
SKP2-209ENST00000620197 EIF3AQ14152 1382 aaKnown RBP17.24■□□□□ 0.35
SKP2-209ENST00000620197 EFCAB6Q5THR3 1501 aa17.23■□□□□ 0.35
SKP2-209ENST00000620197 LMTK2Q8IWU2 1503 aa17.23■□□□□ 0.35
SKP2-209ENST00000620197 CENPQQ7L2Z9 268 aaPredicted RBP17.22■□□□□ 0.35
SKP2-209ENST00000620197 SLFN5Q08AF3 891 aa17.22■□□□□ 0.35
SKP2-209ENST00000620197 PPLO60437 1756 aa17.22■□□□□ 0.35
SKP2-209ENST00000620197 PPRC1Q5VV67 1664 aaKnown RBP17.22■□□□□ 0.35
SKP2-209ENST00000620197 NKTRP30414 1462 aaKnown RBP17.22■□□□□ 0.35
SKP2-209ENST00000620197 C8orf34Q49A92 452 aa17.22■□□□□ 0.35
SKP2-209ENST00000620197 SALL2Q9Y467 1007 aaPredicted RBP17.22■□□□□ 0.35
SKP2-209ENST00000620197 IQSEC2Q5JU85 1478 aa17.21■□□□□ 0.35
SKP2-209ENST00000620197 SBNO2Q9Y2G9 1366 aa17.2■□□□□ 0.34
SKP2-209ENST00000620197 SKAP1Q86WV1 359 aa17.2■□□□□ 0.34
SKP2-209ENST00000620197 ADGRB3O60242 1522 aa17.19■□□□□ 0.34
SKP2-209ENST00000620197 RTL5Q5HYW3 569 aaPredicted RBP17.18■□□□□ 0.34
SKP2-209ENST00000620197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.18■□□□□ 0.341e-6■■□□□ 12.2
SKP2-209ENST00000620197 KIDINS220Q9ULH0 1771 aa17.18■□□□□ 0.34
SKP2-209ENST00000620197 DDRGK1Q96HY6 314 aa17.17■□□□□ 0.34
SKP2-209ENST00000620197 PPM1GO15355 546 aaPredicted RBP17.17■□□□□ 0.34
SKP2-209ENST00000620197 QRICH2Q9H0J4 1663 aa17.17■□□□□ 0.34
SKP2-209ENST00000620197 NLRP1Q9C000 1473 aa17.16■□□□□ 0.34
SKP2-209ENST00000620197 UGGT1Q9NYU2 1555 aa17.16■□□□□ 0.34
SKP2-209ENST00000620197 GOLGA2Q08379 1002 aa17.16■□□□□ 0.34
SKP2-209ENST00000620197 CDCA8Q53HL2 280 aa17.15■□□□□ 0.34
SKP2-209ENST00000620197 IL27Q8NEV9 243 aa17.15■□□□□ 0.34
SKP2-209ENST00000620197 ADGRB1O14514 1584 aa17.15■□□□□ 0.34
SKP2-209ENST00000620197 KNSTRNQ9Y448 316 aa17.15■□□□□ 0.34
SKP2-209ENST00000620197 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
SKP2-209ENST00000620197 EFCAB2Q5VUJ9 269 aa17.14■□□□□ 0.33
SKP2-209ENST00000620197 POLR3AO14802 1390 aaPredicted RBP17.13■□□□□ 0.33
SKP2-209ENST00000620197 NPM2Q86SE8 214 aaKnown RBP17.13■□□□□ 0.33
SKP2-209ENST00000620197 FANCAO15360 1455 aa17.13■□□□□ 0.33
SKP2-209ENST00000620197 NINLQ9Y2I6 1382 aa17.13■□□□□ 0.33
SKP2-209ENST00000620197 FAM161AQ3B820 660 aa17.12■□□□□ 0.33
SKP2-209ENST00000620197 NGEFQ8N5V2 710 aa17.12■□□□□ 0.33
SKP2-209ENST00000620197 NEFMP07197 916 aa17.12■□□□□ 0.33
SKP2-209ENST00000620197 ADGRB2O60241 1585 aa17.12■□□□□ 0.33
SKP2-209ENST00000620197 ANO8Q9HCE9 1232 aaPredicted RBP17.11■□□□□ 0.33
SKP2-209ENST00000620197 ZMYM3Q14202 1370 aa17.1■□□□□ 0.33
SKP2-209ENST00000620197 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
SKP2-209ENST00000620197 PHF23Q9BUL5 403 aaPredicted RBP17.09■□□□□ 0.33
SKP2-209ENST00000620197 CARD14Q9BXL6 1004 aa17.09■□□□□ 0.33
SKP2-209ENST00000620197 USP19O94966 1318 aa17.09■□□□□ 0.33
SKP2-209ENST00000620197 WDR43Q15061 677 aaKnown RBP eCLIP17.09■□□□□ 0.33
SKP2-209ENST00000620197 PIK3C2BO00750 1634 aa17.09■□□□□ 0.33
SKP2-209ENST00000620197 PRKCSHP14314 528 aaPredicted RBP17.08■□□□□ 0.33
SKP2-209ENST00000620197 ARHGEF28Q8N1W1 1705 aaKnown RBP17.08■□□□□ 0.32
SKP2-209ENST00000620197 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
SKP2-209ENST00000620197 DMRT2Q9Y5R5 561 aa17.07■□□□□ 0.32
SKP2-209ENST00000620197 FRMPD1Q5SYB0 1578 aa17.06■□□□□ 0.32
SKP2-209ENST00000620197 ZNF518AQ6AHZ1 1483 aa17.06■□□□□ 0.32
SKP2-209ENST00000620197 KANK1Q14678 1352 aa17.06■□□□□ 0.32
SKP2-209ENST00000620197 E9PSI1 815 aa17.06■□□□□ 0.32
SKP2-209ENST00000620197 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.06■□□□□ 0.32
SKP2-209ENST00000620197 HECW2Q9P2P5 1572 aa17.05■□□□□ 0.32
SKP2-209ENST00000620197 NFKBIBQ15653 356 aa17.04■□□□□ 0.32
SKP2-209ENST00000620197 ANKRD26Q9UPS8 1709 aa17.04■□□□□ 0.32
SKP2-209ENST00000620197 PDE3AQ14432 1141 aa17.04■□□□□ 0.32
SKP2-209ENST00000620197 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
SKP2-209ENST00000620197 ADGRL1O94910 1474 aa17.02■□□□□ 0.32
SKP2-209ENST00000620197 NCBP3Q53F19 620 aaKnown RBP17.02■□□□□ 0.32
SKP2-209ENST00000620197 AFAP1Q8N556 730 aa17.02■□□□□ 0.31
SKP2-209ENST00000620197 ADGRF5Q8IZF2 1346 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms