RNA–Protein interactions for RNA: ENST00000619804.1

CPS1-212, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 5 BASIC

Gene CPS1, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-212ENST00000619804 DEPDC5O75140 1603 aa9.03□□□□□ -0.96
CPS1-212ENST00000619804 PAK3O75914 559 aaPredicted RBP9.03□□□□□ -0.96
CPS1-212ENST00000619804 FRMPD1Q5SYB0 1578 aa9.03□□□□□ -0.96
CPS1-212ENST00000619804 FAM135AQ9P2D6 1515 aa9.02□□□□□ -0.96
CPS1-212ENST00000619804 GGT6Q6P531 493 aa9.02□□□□□ -0.97
CPS1-212ENST00000619804 TAOK2Q9UL54 1235 aa9.02□□□□□ -0.97
CPS1-212ENST00000619804 RNF17Q9BXT8 1623 aaKnown RBP9.02□□□□□ -0.97
CPS1-212ENST00000619804 WASHC2CQ9Y4E1 1318 aa9.02□□□□□ -0.97
CPS1-212ENST00000619804 ZC3H13Q5T200 1668 aaKnown RBP9.02□□□□□ -0.97
CPS1-212ENST00000619804 ARHGEF40Q8TER5 1519 aa9.02□□□□□ -0.97
CPS1-212ENST00000619804 ARID4BQ4LE39 1312 aaPredicted RBP9.01□□□□□ -0.97
CPS1-212ENST00000619804 AGLP35573 1532 aa9.01□□□□□ -0.97
CPS1-212ENST00000619804 TONSLQ96HA7 1378 aa9.01□□□□□ -0.97
CPS1-212ENST00000619804 TET3O43151 1660 aa9.01□□□□□ -0.97
CPS1-212ENST00000619804 CHGAP10645 457 aaKnown RBP9□□□□□ -0.97
CPS1-212ENST00000619804 PLCB2Q00722 1185 aa9□□□□□ -0.97
CPS1-212ENST00000619804 BBXQ8WY36 941 aaPredicted RBP9□□□□□ -0.97
CPS1-212ENST00000619804 PRDM15P57071 1507 aaPredicted RBP9□□□□□ -0.97
CPS1-212ENST00000619804 PZPP20742 1482 aa9□□□□□ -0.97
CPS1-212ENST00000619804 NEUROD1Q13562 356 aa9□□□□□ -0.97
CPS1-212ENST00000619804 YEATS2Q9ULM3 1422 aa8.99□□□□□ -0.97
CPS1-212ENST00000619804 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.99□□□□□ -0.97
CPS1-212ENST00000619804 CCDC61Q9Y6R9 512 aa8.99□□□□□ -0.97
CPS1-212ENST00000619804 RPRD2Q5VT52 1461 aaKnown RBP8.98□□□□□ -0.97
CPS1-212ENST00000619804 VGFO15240 615 aaPredicted RBP8.98□□□□□ -0.97
CPS1-212ENST00000619804 HS6ST3Q8IZP7 471 aa8.98□□□□□ -0.97
CPS1-212ENST00000619804 COL17A1Q9UMD9 1497 aaPredicted RBP8.98□□□□□ -0.97
CPS1-212ENST00000619804 CCDC144AA2RUR9 1427 aa8.97□□□□□ -0.97
CPS1-212ENST00000619804 LMTK2Q8IWU2 1503 aa8.97□□□□□ -0.97
CPS1-212ENST00000619804 CEP152O94986 1710 aa8.97□□□□□ -0.97
CPS1-212ENST00000619804 ANKRD30BQ9BXX2 1392 aa8.96□□□□□ -0.97
CPS1-212ENST00000619804 VWDEQ8N2E2 1590 aa8.96□□□□□ -0.97
CPS1-212ENST00000619804 CD44P16070 742 aaKnown RBP8.95□□□□□ -0.98
CPS1-212ENST00000619804 SPHKAPQ2M3C7 1700 aa8.95□□□□□ -0.98
CPS1-212ENST00000619804 STAC3Q96MF2 364 aa8.95□□□□□ -0.98
CPS1-212ENST00000619804 CNTLNQ9NXG0 1405 aa8.95□□□□□ -0.98
CPS1-212ENST00000619804 CFAP65Q6ZU64 1925 aaKnown RBP8.95□□□□□ -0.98
CPS1-212ENST00000619804 E9PCH4 1651 aa8.95□□□□□ -0.98
CPS1-212ENST00000619804 CAMSAP1Q5T5Y3 1602 aa8.94□□□□□ -0.98
CPS1-212ENST00000619804 EFCAB6Q5THR3 1501 aa8.94□□□□□ -0.98
CPS1-212ENST00000619804 ZNF467Q7Z7K2 595 aaPredicted RBP8.94□□□□□ -0.98
CPS1-212ENST00000619804 SIN3AQ96ST3 1273 aa8.94□□□□□ -0.98
CPS1-212ENST00000619804 KIF1BO60333 1816 aa8.94□□□□□ -0.98
CPS1-212ENST00000619804 MROH1Q8NDA8 1641 aa8.93□□□□□ -0.98
CPS1-212ENST00000619804 ARHGAP31Q2M1Z3 1444 aa8.93□□□□□ -0.98
CPS1-212ENST00000619804 STK25O00506 426 aa8.93□□□□□ -0.98
CPS1-212ENST00000619804 MLECQ14165 292 aa8.93□□□□□ -0.98
CPS1-212ENST00000619804 ZRANB1Q9UGI0 708 aa8.93□□□□□ -0.98
CPS1-212ENST00000619804 ABCC3O15438 1527 aa8.93□□□□□ -0.98
CPS1-212ENST00000619804 SLC52A1Q9NWF4 448 aa8.92□□□□□ -0.98
CPS1-212ENST00000619804 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.91□□□□□ -0.98
CPS1-212ENST00000619804 ZFP91Q96JP5 570 aaPredicted RBP8.91□□□□□ -0.98
CPS1-212ENST00000619804 SGIP1Q9BQI5 828 aa8.91□□□□□ -0.98
CPS1-212ENST00000619804 TRPM2O94759 1503 aa8.91□□□□□ -0.98
CPS1-212ENST00000619804 CLTCQ00610 1675 aaKnown RBP8.91□□□□□ -0.98
CPS1-212ENST00000619804 MROH2AA6NES4 1674 aa8.9□□□□□ -0.98
CPS1-212ENST00000619804 PTPRTO14522 1441 aa8.9□□□□□ -0.98
CPS1-212ENST00000619804 PPP1R15AO75807 674 aaPredicted RBP8.9□□□□□ -0.99
CPS1-212ENST00000619804 PAXIP1Q6ZW49 1069 aaPredicted RBP8.9□□□□□ -0.99
CPS1-212ENST00000619804 FER1L4A9Z1Z3 1794 aa8.89□□□□□ -0.99
CPS1-212ENST00000619804 HDGFP51858 240 aaKnown RBP8.89□□□□□ -0.99
CPS1-212ENST00000619804 HAP1P54257 671 aaPredicted RBP8.89□□□□□ -0.99
CPS1-212ENST00000619804 ZNF579Q8NAF0 562 aaKnown RBP8.89□□□□□ -0.99
CPS1-212ENST00000619804 CFAP44Q96MT7 982 aa8.89□□□□□ -0.99
CPS1-212ENST00000619804 BCL11BQ9C0K0 894 aaPredicted RBP8.89□□□□□ -0.99
CPS1-212ENST00000619804 PCDHB8Q9UN66 801 aa8.89□□□□□ -0.99
CPS1-212ENST00000619804 PCDHB13Q9Y5F0 798 aa8.89□□□□□ -0.99
CPS1-212ENST00000619804 NEURL4Q96JN8 1562 aa8.88□□□□□ -0.99
CPS1-212ENST00000619804 NPATQ14207 1427 aa8.88□□□□□ -0.99
CPS1-212ENST00000619804 C19orf67A6NJJ6 358 aa8.88□□□□□ -0.99
CPS1-212ENST00000619804 KIF12Q96FN5 646 aa8.88□□□□□ -0.99
CPS1-212ENST00000619804 STK24Q9Y6E0 443 aa8.88□□□□□ -0.99
CPS1-212ENST00000619804 PREX1Q8TCU6 1659 aa8.88□□□□□ -0.99
CPS1-212ENST00000619804 RPGRIP1LQ68CZ1 1315 aa8.87□□□□□ -0.99
CPS1-212ENST00000619804 MAP3K13O43283 966 aa8.87□□□□□ -0.99
CPS1-212ENST00000619804 PDAP1Q13442 181 aaKnown RBP8.87□□□□□ -0.99
CPS1-212ENST00000619804 SPRYD3Q8NCJ5 442 aa8.87□□□□□ -0.99
CPS1-212ENST00000619804 L3MBTL2Q969R5 705 aa8.87□□□□□ -0.99
CPS1-212ENST00000619804 ZMYM3Q14202 1370 aa8.87□□□□□ -0.99
CPS1-212ENST00000619804 RGL3Q3MIN7 710 aa8.86□□□□□ -0.99
CPS1-212ENST00000619804 ZNF326Q5BKZ1 582 aaKnown RBP8.86□□□□□ -0.99
CPS1-212ENST00000619804 DCAF11Q8TEB1 546 aa8.86□□□□□ -0.99
CPS1-212ENST00000619804 PHF12Q96QT6 1004 aa8.86□□□□□ -0.99
CPS1-212ENST00000619804 NOS1P29475 1434 aa8.86□□□□□ -0.99
CPS1-212ENST00000619804 SETD1BQ9UPS6 1966 aaKnown RBP8.85□□□□□ -0.99
CPS1-212ENST00000619804 PLA2R1Q13018 1463 aa8.85□□□□□ -0.99
CPS1-212ENST00000619804 IFNL1Q8IU54 200 aa8.85□□□□□ -0.99
CPS1-212ENST00000619804 CLTCL1P53675 1640 aa8.84□□□□□ -0.99
CPS1-212ENST00000619804 SPATA31D1Q6ZQQ2 1576 aa8.84□□□□□ -0.99
CPS1-212ENST00000619804 ERVK-7P63135 1459 aa8.84□□□□□ -0.99
CPS1-212ENST00000619804 KDM2AQ9Y2K7 1162 aa8.84□□□□□ -0.99
CPS1-212ENST00000619804 SIGLEC1Q9BZZ2 1709 aa8.84□□□□□ -0.99
CPS1-212ENST00000619804 PIK3C2BO00750 1634 aa8.82□□□□□ -1
CPS1-212ENST00000619804 TNRQ92752 1358 aa8.82□□□□□ -1
CPS1-212ENST00000619804 KDM5AP29375 1690 aaKnown RBP8.82□□□□□ -1
CPS1-212ENST00000619804 PSEN1P49768 467 aa8.82□□□□□ -1
CPS1-212ENST00000619804 NKX1-1Q15270 411 aaPredicted RBP8.82□□□□□ -1
CPS1-212ENST00000619804 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.82□□□□□ -1
CPS1-212ENST00000619804 C3P01024 1663 aa8.81□□□□□ -1
CPS1-212ENST00000619804 IDI1Q13907 227 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms