RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 TCP11L2Q8N4U5 519 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 MAPK8IP2Q13387 824 aaPredicted RBP3.8□□□□□ -1.8
NEB-220ENST00000618972 TSPY4P0CV99 314 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 TSPY10P0CW01 314 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 RALBP1Q15311 655 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 KRT24Q2M2I5 525 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 WASHC2CQ9Y4E1 1318 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 EXOSC9Q06265 439 aaKnown RBP3.8□□□□□ -1.8
NEB-220ENST00000618972 AFAP1Q8N556 730 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 FAM13BQ9NYF5 915 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 PRPF40AO75400 957 aaKnown RBP3.8□□□□□ -1.8
NEB-220ENST00000618972 RAPGEF2Q9Y4G8 1499 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 SSFA2P28290 1259 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 RNF214Q8ND24 703 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 PPFIA3O75145 1194 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 HMMRO75330 724 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 CCDC9Q9Y3X0 531 aaKnown RBP3.8□□□□□ -1.8
NEB-220ENST00000618972 USP8P40818 1118 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 TAOK2Q9UL54 1235 aa3.8□□□□□ -1.8
NEB-220ENST00000618972 KDM4AO75164 1064 aa3.79□□□□□ -1.8
NEB-220ENST00000618972 TPM4P67936 248 aa3.79□□□□□ -1.8
NEB-220ENST00000618972 CLSTN1O94985 981 aa3.79□□□□□ -1.8
NEB-220ENST00000618972 RNF123Q5XPI4 1314 aa3.79□□□□□ -1.8
NEB-220ENST00000618972 R3HCC1Q9Y3T6 440 aaKnown RBP3.79□□□□□ -1.8
NEB-220ENST00000618972 JPH4Q96JJ6 628 aa3.79□□□□□ -1.8
NEB-220ENST00000618972 TSHZ3Q63HK5 1081 aa3.79□□□□□ -1.8
NEB-220ENST00000618972 GGNBP2Q9H3C7 697 aa3.79□□□□□ -1.8
NEB-220ENST00000618972 CABP2Q9NPB3 220 aa3.79□□□□□ -1.8
NEB-220ENST00000618972 RARSP54136 660 aaKnown RBP3.79□□□□□ -1.8
NEB-220ENST00000618972 TUBB4AP04350 444 aa3.79□□□□□ -1.8
NEB-220ENST00000618972 NPM1P06748 294 aaKnown RBP eCLIP3.79□□□□□ -1.8
NEB-220ENST00000618972 TSPYL6Q8N831 410 aa3.79□□□□□ -1.8
NEB-220ENST00000618972 CHMP3Q9Y3E7 222 aa3.79□□□□□ -1.8
NEB-220ENST00000618972 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.79□□□□□ -1.8
NEB-220ENST00000618972 MNS1Q8NEH6 495 aa3.79□□□□□ -1.8
NEB-220ENST00000618972 RBM28Q9NW13 759 aaKnown RBP3.79□□□□□ -1.8
NEB-220ENST00000618972 FAM107BQ9H098 131 aa3.79□□□□□ -1.8
NEB-220ENST00000618972 WWC1Q8IX03 1113 aa3.78□□□□□ -1.8
NEB-220ENST00000618972 SSH1Q8WYL5 1049 aa3.78□□□□□ -1.8
NEB-220ENST00000618972 CAGE1Q8TC20 777 aa3.78□□□□□ -1.8
NEB-220ENST00000618972 TERF1P54274 439 aa3.78□□□□□ -1.8
NEB-220ENST00000618972 MRE11P49959 708 aa3.78□□□□□ -1.8
NEB-220ENST00000618972 RBSNQ9H1K0 784 aa3.78□□□□□ -1.8
NEB-220ENST00000618972 CD2BP2O95400 341 aaKnown RBP3.78□□□□□ -1.8
NEB-220ENST00000618972 MROH2BQ7Z745 1585 aa3.78□□□□□ -1.8
NEB-220ENST00000618972 CTR9Q6PD62 1173 aa3.78□□□□□ -1.8
NEB-220ENST00000618972 PHACTR3Q96KR7 559 aa3.78□□□□□ -1.8
NEB-220ENST00000618972 ZBED9Q6R2W3 1325 aa3.78□□□□□ -1.8
NEB-220ENST00000618972 RDXP35241 583 aaKnown RBP3.78□□□□□ -1.8
NEB-220ENST00000618972 DNAJC2Q99543 621 aaKnown RBP3.78□□□□□ -1.81
NEB-220ENST00000618972 MAP4K4O95819 1239 aaPredicted RBP3.77□□□□□ -1.81
NEB-220ENST00000618972 RIPK4P57078 832 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 CHMP7Q8WUX9 453 aaPredicted RBP3.77□□□□□ -1.81
NEB-220ENST00000618972 NUP155O75694 1391 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 HMOX1P09601 288 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 MCM5P33992 734 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 SSR1P43307 286 aaKnown RBP3.77□□□□□ -1.81
NEB-220ENST00000618972 PMFBP1Q8TBY8 1022 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 CDR1P51861 262 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 GAS2L2Q8NHY3 880 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 NAP1L2Q9ULW6 460 aaPredicted RBP3.77□□□□□ -1.81
NEB-220ENST00000618972 ZNF771Q7L3S4 317 aaPredicted RBP3.77□□□□□ -1.81
NEB-220ENST00000618972 ATAD2Q6PL18 1390 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 ITPRIPQ8IWB1 547 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 NPHP1O15259 732 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 PLCB2Q00722 1185 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 GOLGA6L19H0YKK7 550 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 NUCB2P80303 420 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 CEP120Q8N960 986 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 TESK2Q96S53 571 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 C22orf23Q9BZE7 217 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 SPDYE4A6NLX3 237 aa3.77□□□□□ -1.81
NEB-220ENST00000618972 GOLGA6L10A6NI86 522 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 TUBBP07437 444 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 LTV1Q96GA3 475 aaPredicted RBP3.76□□□□□ -1.81
NEB-220ENST00000618972 PATL2C9JE40 543 aaKnown RBP3.76□□□□□ -1.81
NEB-220ENST00000618972 NCKAP5LQ9HCH0 1330 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 MCCP23508 829 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 ACBD3Q9H3P7 528 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 DDX11L8A8MPP1 907 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 TMEM57Q8N5G2 664 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 GDPD2Q9HCC8 539 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 WRNQ14191 1432 aaPredicted RBP eCLIP3.76□□□□□ -1.81
NEB-220ENST00000618972 XPCQ01831 940 aaPredicted RBP3.76□□□□□ -1.81
NEB-220ENST00000618972 NLRP13Q86W25 1043 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 TRERF1Q96PN7 1200 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 RBM33Q96EV2 1170 aaKnown RBP3.76□□□□□ -1.81
NEB-220ENST00000618972 CWC22Q9HCG8 908 aaKnown RBP3.76□□□□□ -1.81
NEB-220ENST00000618972 NSFL1CQ9UNZ2 370 aaKnown RBP3.76□□□□□ -1.81
NEB-220ENST00000618972 FBXW7Q969H0 707 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 TFIP11Q9UBB9 837 aaKnown RBP3.76□□□□□ -1.81
NEB-220ENST00000618972 MCTP1Q6DN14 999 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 NEFHP12036 1026 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 CREBRFQ8IUR6 639 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 PDS5BQ9NTI5 1447 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 AK7Q96M32 723 aa3.76□□□□□ -1.81
NEB-220ENST00000618972 CENPQQ7L2Z9 268 aaPredicted RBP3.76□□□□□ -1.81
NEB-220ENST00000618972 PAIP2Q9BPZ3 127 aaKnown RBP3.76□□□□□ -1.81
NEB-220ENST00000618972 HSP90AB1P08238 724 aaKnown RBP3.75□□□□□ -1.81
NEB-220ENST00000618972 C8orf58Q8NAV2 365 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms