RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 GPATCH11Q8N954 259 aa19.91■□□□□ 0.78
CNTNAP3B-214ENST00000618777 RNF214Q8ND24 703 aa19.91■□□□□ 0.78
CNTNAP3B-214ENST00000618777 PRKRIP1Q9H875 184 aaPredicted RBP19.91■□□□□ 0.78
CNTNAP3B-214ENST00000618777 CHMP3Q9Y3E7 222 aa19.91■□□□□ 0.78
CNTNAP3B-214ENST00000618777 SPAG9O60271 1321 aaKnown RBP19.91■□□□□ 0.78
CNTNAP3B-214ENST00000618777 GIMAP7Q8NHV1 300 aa19.91■□□□□ 0.78
CNTNAP3B-214ENST00000618777 CCP110O43303 1012 aa19.9■□□□□ 0.78
CNTNAP3B-214ENST00000618777 SLC4A10Q6U841 1118 aa19.9■□□□□ 0.78
CNTNAP3B-214ENST00000618777 COG6Q9Y2V7 657 aa19.9■□□□□ 0.78
CNTNAP3B-214ENST00000618777 WRNQ14191 1432 aaPredicted RBP eCLIP19.9■□□□□ 0.78
CNTNAP3B-214ENST00000618777 LMOD3Q0VAK6 560 aa19.89■□□□□ 0.78
CNTNAP3B-214ENST00000618777 PCMTD1Q96MG8 357 aaPredicted RBP19.89■□□□□ 0.78
CNTNAP3B-214ENST00000618777 ZKSCAN1P17029 563 aaPredicted RBP19.89■□□□□ 0.77
CNTNAP3B-214ENST00000618777 PLCD3Q8N3E9 789 aa19.89■□□□□ 0.77
CNTNAP3B-214ENST00000618777 CCDC73Q6ZRK6 1079 aa19.89■□□□□ 0.77
CNTNAP3B-214ENST00000618777 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
CNTNAP3B-214ENST00000618777 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
CNTNAP3B-214ENST00000618777 NAT10Q9H0A0 1025 aaKnown RBP19.88■□□□□ 0.77
CNTNAP3B-214ENST00000618777 LMOD2Q6P5Q4 547 aa19.88■□□□□ 0.77
CNTNAP3B-214ENST00000618777 CPLX2Q6PUV4 134 aaKnown RBP19.88■□□□□ 0.77
CNTNAP3B-214ENST00000618777 KIAA0754O94854 1291 aa19.88■□□□□ 0.77
CNTNAP3B-214ENST00000618777 RUFY2Q8WXA3 655 aa19.88■□□□□ 0.77
CNTNAP3B-214ENST00000618777 VPS8Q8N3P4 1428 aa19.87■□□□□ 0.77
CNTNAP3B-214ENST00000618777 CAVIN1Q6NZI2 390 aaKnown RBP19.87■□□□□ 0.77
CNTNAP3B-214ENST00000618777 SMC3Q9UQE7 1217 aa19.87■□□□□ 0.77
CNTNAP3B-214ENST00000618777 PKD2Q13563 968 aa19.86■□□□□ 0.77
CNTNAP3B-214ENST00000618777 TSPY26PQ9H489 355 aa19.86■□□□□ 0.77
CNTNAP3B-214ENST00000618777 PLCD4Q9BRC7 762 aa19.86■□□□□ 0.77
CNTNAP3B-214ENST00000618777 CCDC47Q96A33 483 aaKnown RBP19.86■□□□□ 0.77
CNTNAP3B-214ENST00000618777 CCDC112Q8NEF3 446 aa19.86■□□□□ 0.77
CNTNAP3B-214ENST00000618777 DDX19BQ9UMR2 479 aa19.86■□□□□ 0.77
CNTNAP3B-214ENST00000618777 TRIM5Q9C035 493 aa19.85■□□□□ 0.77
CNTNAP3B-214ENST00000618777 VPS37CA5D8V6 355 aaPredicted RBP19.84■□□□□ 0.77
CNTNAP3B-214ENST00000618777 BCL11BQ9C0K0 894 aaPredicted RBP19.84■□□□□ 0.77
CNTNAP3B-214ENST00000618777 AAMPQ13685 434 aa19.84■□□□□ 0.77
CNTNAP3B-214ENST00000618777 AXDND1Q5T1B0 1012 aaPredicted RBP19.84■□□□□ 0.77
CNTNAP3B-214ENST00000618777 MARCH6O60337 910 aa19.84■□□□□ 0.77
CNTNAP3B-214ENST00000618777 TIGD1Q96MW7 591 aa19.84■□□□□ 0.77
CNTNAP3B-214ENST00000618777 MPHOSPH9Q99550 1183 aa19.83■□□□□ 0.76
CNTNAP3B-214ENST00000618777 INTS3Q68E01 1043 aaKnown RBP19.82■□□□□ 0.76
CNTNAP3B-214ENST00000618777 TOMM22Q9NS69 142 aa19.82■□□□□ 0.76
CNTNAP3B-214ENST00000618777 SOX12O15370 315 aa19.82■□□□□ 0.76
CNTNAP3B-214ENST00000618777 AKAP17AQ02040 695 aaKnown RBP19.82■□□□□ 0.76
CNTNAP3B-214ENST00000618777 DHX8Q14562 1220 aaKnown RBP19.82■□□□□ 0.76
CNTNAP3B-214ENST00000618777 BAZ1BQ9UIG0 1483 aaKnown RBP19.82■□□□□ 0.76
CNTNAP3B-214ENST00000618777 GOLGA6L7A0A1B0GV03 622 aa19.81■□□□□ 0.76
CNTNAP3B-214ENST00000618777 NGEFQ8N5V2 710 aa19.81■□□□□ 0.76
CNTNAP3B-214ENST00000618777 TRIM29Q14134 588 aa19.81■□□□□ 0.76
CNTNAP3B-214ENST00000618777 CAGE1Q8TC20 777 aa19.81■□□□□ 0.76
CNTNAP3B-214ENST00000618777 ARHGAP35Q9NRY4 1499 aa19.81■□□□□ 0.76
CNTNAP3B-214ENST00000618777 GTF2A1P52655 376 aaPredicted RBP19.81■□□□□ 0.76
CNTNAP3B-214ENST00000618777 EIF3JO75822 258 aaKnown RBP19.81■□□□□ 0.76
CNTNAP3B-214ENST00000618777 CT47B1P0C2W7 299 aaPredicted RBP19.81■□□□□ 0.76
CNTNAP3B-214ENST00000618777 EIF3AQ14152 1382 aaKnown RBP19.8■□□□□ 0.76
CNTNAP3B-214ENST00000618777 KANK1Q14678 1352 aa19.8■□□□□ 0.76
CNTNAP3B-214ENST00000618777 NEFHP12036 1026 aa19.8■□□□□ 0.76
CNTNAP3B-214ENST00000618777 BCL2L13Q9BXK5 485 aa19.8■□□□□ 0.76
CNTNAP3B-214ENST00000618777 L3MBTL2Q969R5 705 aa19.8■□□□□ 0.76
CNTNAP3B-214ENST00000618777 TRERF1Q96PN7 1200 aa19.79■□□□□ 0.76
CNTNAP3B-214ENST00000618777 IPO4Q8TEX9 1081 aaKnown RBP19.78■□□□□ 0.76
CNTNAP3B-214ENST00000618777 CLCN1P35523 988 aa19.78■□□□□ 0.76
CNTNAP3B-214ENST00000618777 ANO2Q9NQ90 1003 aa19.78■□□□□ 0.76
CNTNAP3B-214ENST00000618777 FOXD1Q16676 465 aa19.78■□□□□ 0.76
CNTNAP3B-214ENST00000618777 SYNE3Q6ZMZ3 975 aa19.78■□□□□ 0.76
CNTNAP3B-214ENST00000618777 DYDC1Q8WWB3 177 aa19.78■□□□□ 0.76
CNTNAP3B-214ENST00000618777 ERLIN1O75477 346 aa19.77■□□□□ 0.76
CNTNAP3B-214ENST00000618777 NAP1L1P55209 391 aaKnown RBP19.77■□□□□ 0.76
CNTNAP3B-214ENST00000618777 MYO6Q9UM54 1294 aa19.77■□□□□ 0.76
CNTNAP3B-214ENST00000618777 RNF20Q5VTR2 975 aa19.77■□□□□ 0.76
CNTNAP3B-214ENST00000618777 BACH2Q9BYV9 841 aa19.77■□□□□ 0.75
CNTNAP3B-214ENST00000618777 ZRSR2Q15696 482 aaKnown RBP19.76■□□□□ 0.75
CNTNAP3B-214ENST00000618777 DYNC1I1O14576 645 aa19.76■□□□□ 0.75
CNTNAP3B-214ENST00000618777 FMN1Q68DA7 1419 aa19.76■□□□□ 0.75
CNTNAP3B-214ENST00000618777 OLFM4Q6UX06 510 aa19.76■□□□□ 0.75
CNTNAP3B-214ENST00000618777 GTPBP4Q9BZE4 634 aaKnown RBP19.76■□□□□ 0.75
CNTNAP3B-214ENST00000618777 INCENPQ9NQS7 918 aa19.76■□□□□ 0.75
CNTNAP3B-214ENST00000618777 CPLX1O14810 134 aa19.75■□□□□ 0.75
CNTNAP3B-214ENST00000618777 RSPH4AQ5TD94 716 aa19.75■□□□□ 0.75
CNTNAP3B-214ENST00000618777 PDILTQ8N807 584 aa19.75■□□□□ 0.75
CNTNAP3B-214ENST00000618777 DZIP1LQ8IYY4 767 aaKnown RBP19.75■□□□□ 0.75
CNTNAP3B-214ENST00000618777 TNNT1P13805 278 aa19.75■□□□□ 0.75
CNTNAP3B-214ENST00000618777 RBM25P49756 843 aaKnown RBP19.75■□□□□ 0.75
CNTNAP3B-214ENST00000618777 SAFB2Q14151 953 aaKnown RBP eCLIP19.75■□□□□ 0.75
CNTNAP3B-214ENST00000618777 PRPF40AO75400 957 aaKnown RBP19.74■□□□□ 0.75
CNTNAP3B-214ENST00000618777 FBXW7Q969H0 707 aa19.74■□□□□ 0.75
CNTNAP3B-214ENST00000618777 SDF4Q9BRK5 362 aa19.73■□□□□ 0.75
CNTNAP3B-214ENST00000618777 C11orf95C9JLR9 678 aaPredicted RBP19.73■□□□□ 0.75
CNTNAP3B-214ENST00000618777 LRRFIP1Q32MZ4 808 aaKnown RBP19.73■□□□□ 0.75
CNTNAP3B-214ENST00000618777 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.72■□□□□ 0.75
CNTNAP3B-214ENST00000618777 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.72■□□□□ 0.75
CNTNAP3B-214ENST00000618777 RRP7AQ9Y3A4 280 aaKnown RBP19.72■□□□□ 0.75
CNTNAP3B-214ENST00000618777 MCM4P33991 863 aa19.71■□□□□ 0.75
CNTNAP3B-214ENST00000618777 CDC45O75419 566 aa19.71■□□□□ 0.75
CNTNAP3B-214ENST00000618777 SMAP1Q8IYB5 467 aaPredicted RBP19.71■□□□□ 0.75
CNTNAP3B-214ENST00000618777 NEXNQ0ZGT2 675 aa19.71■□□□□ 0.75
CNTNAP3B-214ENST00000618777 NBPF1Q3BBV0 1214 aa19.71■□□□□ 0.75
CNTNAP3B-214ENST00000618777 SKIDA1Q1XH10 827 aa19.7■□□□□ 0.74
CNTNAP3B-214ENST00000618777 PPP4R3BQ5MIZ7 849 aa19.7■□□□□ 0.74
CNTNAP3B-214ENST00000618777 TERF2IPQ9NYB0 399 aa19.7■□□□□ 0.74
CNTNAP3B-214ENST00000618777 GOLGA6L10A6NI86 522 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms