RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 ANP32EQ9BTT0 268 aa17.75■□□□□ 0.43
CIITA-213ENST00000618327 TRAPPC8Q9Y2L5 1435 aa17.75■□□□□ 0.43
CIITA-213ENST00000618327 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
CIITA-213ENST00000618327 BRD4O60885 1362 aaPredicted RBP17.74■□□□□ 0.43
CIITA-213ENST00000618327 DUOX2Q9NRD8 1548 aa17.73■□□□□ 0.43
CIITA-213ENST00000618327 MAPKBP1O60336 1514 aa17.73■□□□□ 0.43
CIITA-213ENST00000618327 SLC12A5Q9H2X9 1139 aa17.73■□□□□ 0.43
CIITA-213ENST00000618327 SMC4Q9NTJ3 1288 aa17.72■□□□□ 0.43
CIITA-213ENST00000618327 KDM5BQ9UGL1 1544 aa17.71■□□□□ 0.43
CIITA-213ENST00000618327 ZNF518AQ6AHZ1 1483 aa17.71■□□□□ 0.43
CIITA-213ENST00000618327 IDI1Q13907 227 aa17.71■□□□□ 0.42
CIITA-213ENST00000618327 E9PSI1 815 aa17.7■□□□□ 0.42
CIITA-213ENST00000618327 PSME1Q06323 249 aa17.7■□□□□ 0.42
CIITA-213ENST00000618327 FBXO31Q5XUX0 539 aaPredicted RBP17.7■□□□□ 0.42
CIITA-213ENST00000618327 NGEFQ8N5V2 710 aa17.69■□□□□ 0.42
CIITA-213ENST00000618327 DDRGK1Q96HY6 314 aa17.69■□□□□ 0.42
CIITA-213ENST00000618327 ITPRIPQ8IWB1 547 aa17.69■□□□□ 0.42
CIITA-213ENST00000618327 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
CIITA-213ENST00000618327 SHANK2Q9UPX8 1470 aa17.69■□□□□ 0.42
CIITA-213ENST00000618327 PPP2R1AP30153 589 aa17.68■□□□□ 0.42
CIITA-213ENST00000618327 CDK19Q9BWU1 502 aa17.68■□□□□ 0.42
CIITA-213ENST00000618327 SLC26A8Q96RN1 970 aa17.68■□□□□ 0.42
CIITA-213ENST00000618327 ADGRF5Q8IZF2 1346 aa17.68■□□□□ 0.42
CIITA-213ENST00000618327 A2MP01023 1474 aa17.67■□□□□ 0.42
CIITA-213ENST00000618327 MTHFSP49914 203 aa17.67■□□□□ 0.42
CIITA-213ENST00000618327 BECN1Q14457 450 aa17.67■□□□□ 0.42
CIITA-213ENST00000618327 C11orf95C9JLR9 678 aaPredicted RBP17.66■□□□□ 0.42
CIITA-213ENST00000618327 STK31Q9BXU1 1019 aa17.66■□□□□ 0.42
CIITA-213ENST00000618327 CHMP4AQ9BY43 222 aa17.66■□□□□ 0.42
CIITA-213ENST00000618327 CLUAP1Q96AJ1 413 aa17.66■□□□□ 0.42
CIITA-213ENST00000618327 CASC1Q6TDU7 716 aa17.66■□□□□ 0.42
CIITA-213ENST00000618327 RUNDC1Q96C34 613 aa17.66■□□□□ 0.42
CIITA-213ENST00000618327 FAM135AQ9P2D6 1515 aa17.66■□□□□ 0.42
CIITA-213ENST00000618327 TEX14Q8IWB6 1497 aa17.65■□□□□ 0.42
CIITA-213ENST00000618327 OS9Q13438 667 aaPredicted RBP17.65■□□□□ 0.42
CIITA-213ENST00000618327 ADAMTS8Q9UP79 889 aa17.65■□□□□ 0.42
CIITA-213ENST00000618327 MAGI3Q5TCQ9 1506 aa17.65■□□□□ 0.42
CIITA-213ENST00000618327 DNMT1P26358 1616 aaKnown RBP17.65■□□□□ 0.42
CIITA-213ENST00000618327 CABP1Q9NZU7 370 aa17.65■□□□□ 0.42
CIITA-213ENST00000618327 ABCC10Q5T3U5 1492 aa17.64■□□□□ 0.41
CIITA-213ENST00000618327 ANKLE2Q86XL3 938 aa17.63■□□□□ 0.41
CIITA-213ENST00000618327 ATF3P18847 181 aa17.63■□□□□ 0.41
CIITA-213ENST00000618327 RWDD1Q9H446 243 aaPredicted RBP17.63■□□□□ 0.41
CIITA-213ENST00000618327 RIPK4P57078 832 aa17.62■□□□□ 0.41
CIITA-213ENST00000618327 RTEL1-TNFRSF6BF6WH68 1400 aa17.62■□□□□ 0.41
CIITA-213ENST00000618327 NOS1P29475 1434 aa17.61■□□□□ 0.41
CIITA-213ENST00000618327 NLRP6P59044 892 aa17.6■□□□□ 0.41
CIITA-213ENST00000618327 RRP1P56182 461 aaKnown RBP17.6■□□□□ 0.41
CIITA-213ENST00000618327 ATAD2Q6PL18 1390 aa17.6■□□□□ 0.41
CIITA-213ENST00000618327 ELL2O00472 640 aaPredicted RBP17.6■□□□□ 0.41
CIITA-213ENST00000618327 BCL2L13Q9BXK5 485 aa17.6■□□□□ 0.41
CIITA-213ENST00000618327 PLIN1O60240 522 aa17.59■□□□□ 0.41
CIITA-213ENST00000618327 PROSER2Q86WR7 435 aaPredicted RBP17.59■□□□□ 0.41
CIITA-213ENST00000618327 PMFBP1Q8TBY8 1022 aa17.59■□□□□ 0.41
CIITA-213ENST00000618327 CEBPAP49715 358 aaPredicted RBP17.59■□□□□ 0.41
CIITA-213ENST00000618327 HMOX1P09601 288 aa17.58■□□□□ 0.41
CIITA-213ENST00000618327 NUTM2GQ5VZR2 741 aa17.58■□□□□ 0.41
CIITA-213ENST00000618327 ZNF692Q9BU19 519 aaPredicted RBP17.58■□□□□ 0.4
CIITA-213ENST00000618327 PNISRQ8TF01 805 aaKnown RBP17.58■□□□□ 0.4
CIITA-213ENST00000618327 TRIM44Q96DX7 344 aaPredicted RBP17.57■□□□□ 0.4
CIITA-213ENST00000618327 ABCA8O94911 1581 aa17.57■□□□□ 0.4
CIITA-213ENST00000618327 ADGRL2O95490 1459 aa17.57■□□□□ 0.4
CIITA-213ENST00000618327 C14orf93Q9H972 538 aaKnown RBP17.57■□□□□ 0.4
CIITA-213ENST00000618327 CCDC184Q52MB2 194 aa17.56■□□□□ 0.4
CIITA-213ENST00000618327 ESCO1Q5FWF5 840 aa17.56■□□□□ 0.4
CIITA-213ENST00000618327 WAPLQ7Z5K2 1190 aa17.56■□□□□ 0.4
CIITA-213ENST00000618327 CCDC9Q9Y3X0 531 aaKnown RBP17.56■□□□□ 0.4
CIITA-213ENST00000618327 SCAF11Q99590 1463 aaKnown RBP17.55■□□□□ 0.4
CIITA-213ENST00000618327 C1orf141Q5JVX7 400 aa17.55■□□□□ 0.4
CIITA-213ENST00000618327 GPRASP1Q5JY77 1395 aa17.55■□□□□ 0.4
CIITA-213ENST00000618327 ABTB2Q8N961 1025 aa17.54■□□□□ 0.4
CIITA-213ENST00000618327 APBB1O00213 710 aa17.54■□□□□ 0.4
CIITA-213ENST00000618327 SLC4A10Q6U841 1118 aa17.54■□□□□ 0.4
CIITA-213ENST00000618327 TCP11L2Q8N4U5 519 aa17.54■□□□□ 0.4
CIITA-213ENST00000618327 ZKSCAN2Q63HK3 967 aa17.53■□□□□ 0.4
CIITA-213ENST00000618327 TCERG1O14776 1098 aaKnown RBP17.53■□□□□ 0.4
CIITA-213ENST00000618327 NPHP1O15259 732 aa17.53■□□□□ 0.4
CIITA-213ENST00000618327 TEFQ10587 303 aa17.53■□□□□ 0.4
CIITA-213ENST00000618327 EXOC6Q8TAG9 804 aa17.53■□□□□ 0.4
CIITA-213ENST00000618327 CCDC61Q9Y6R9 512 aa17.53■□□□□ 0.4
CIITA-213ENST00000618327 PZPP20742 1482 aa17.53■□□□□ 0.4
CIITA-213ENST00000618327 ZNF330Q9Y3S2 320 aaPredicted RBP17.52■□□□□ 0.4
CIITA-213ENST00000618327 NUDT16Q96DE0 195 aaKnown RBP17.51■□□□□ 0.39
CIITA-213ENST00000618327 CHD1O14646 1710 aa17.51■□□□□ 0.39
CIITA-213ENST00000618327 NSD3Q9BZ95 1437 aa17.51■□□□□ 0.39
CIITA-213ENST00000618327 UHRF1BP1LA0JNW5 1464 aa17.5■□□□□ 0.39
CIITA-213ENST00000618327 EVA1CP58658 441 aa17.5■□□□□ 0.39
CIITA-213ENST00000618327 CRBNQ96SW2 442 aa17.5■□□□□ 0.39
CIITA-213ENST00000618327 RALGAPBQ86X10 1494 aa17.5■□□□□ 0.39
CIITA-213ENST00000618327 CDCA7LQ96GN5 454 aa17.49■□□□□ 0.39
CIITA-213ENST00000618327 PRAG1Q86YV5 1406 aa17.49■□□□□ 0.39
CIITA-213ENST00000618327 GNAI1P63096 354 aa17.49■□□□□ 0.39
CIITA-213ENST00000618327 RBM19Q9Y4C8 960 aaKnown RBP17.49■□□□□ 0.39
CIITA-213ENST00000618327 COG6Q9Y2V7 657 aa17.48■□□□□ 0.39
CIITA-213ENST00000618327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.48■□□□□ 0.39
CIITA-213ENST00000618327 TNRQ92752 1358 aa17.48■□□□□ 0.39
CIITA-213ENST00000618327 HMMRO75330 724 aa17.48■□□□□ 0.39
CIITA-213ENST00000618327 PRKAR2BP31323 418 aa17.48■□□□□ 0.39
CIITA-213ENST00000618327 ATP7AQ04656 1500 aa17.48■□□□□ 0.39
CIITA-213ENST00000618327 HDAC5Q9UQL6 1122 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms