RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 KDM5CP41229 1560 aa7.34□□□□□ -1.23
CPNE4-214ENST00000617767 DISP3Q9P2K9 1392 aa7.34□□□□□ -1.23
CPNE4-214ENST00000617767 HSP90AA1P07900 732 aaKnown RBP7.34□□□□□ -1.23
CPNE4-214ENST00000617767 PANK3Q9H999 370 aa7.34□□□□□ -1.23
CPNE4-214ENST00000617767 PRAG1Q86YV5 1406 aa7.34□□□□□ -1.23
CPNE4-214ENST00000617767 POTEDQ86YR6 584 aa7.34□□□□□ -1.24
CPNE4-214ENST00000617767 ADGRF5Q8IZF2 1346 aa7.33□□□□□ -1.24
CPNE4-214ENST00000617767 GTF2E1P29083 439 aaPredicted RBP7.33□□□□□ -1.24
CPNE4-214ENST00000617767 PRDM4Q9UKN5 801 aa7.33□□□□□ -1.24
CPNE4-214ENST00000617767 KDM5DQ9BY66 1539 aa7.33□□□□□ -1.24
CPNE4-214ENST00000617767 RALGAPBQ86X10 1494 aa7.33□□□□□ -1.24
CPNE4-214ENST00000617767 MAST1Q9Y2H9 1570 aa7.33□□□□□ -1.24
CPNE4-214ENST00000617767 E9PCH4 1651 aa7.33□□□□□ -1.24
CPNE4-214ENST00000617767 ERBINQ96RT1 1412 aa7.33□□□□□ -1.24
CPNE4-214ENST00000617767 BRD2P25440 801 aaKnown RBP7.33□□□□□ -1.24
CPNE4-214ENST00000617767 IPO9Q96P70 1041 aaKnown RBP7.33□□□□□ -1.24
CPNE4-214ENST00000617767 TRAK1Q9UPV9 953 aa7.33□□□□□ -1.24
CPNE4-214ENST00000617767 TNNT2P45379 298 aaPredicted RBP7.33□□□□□ -1.24
CPNE4-214ENST00000617767 PLXNC1O60486 1568 aa7.32□□□□□ -1.24
CPNE4-214ENST00000617767 STK26Q9P289 416 aa7.32□□□□□ -1.24
CPNE4-214ENST00000617767 UNC13BO14795 1591 aa7.32□□□□□ -1.24
CPNE4-214ENST00000617767 DHX29Q7Z478 1369 aaKnown RBP7.32□□□□□ -1.24
CPNE4-214ENST00000617767 IQGAP3Q86VI3 1631 aa7.32□□□□□ -1.24
CPNE4-214ENST00000617767 TULP1O00294 542 aaPredicted RBP7.31□□□□□ -1.24
CPNE4-214ENST00000617767 ANP32AP39687 249 aaKnown RBP7.31□□□□□ -1.24
CPNE4-214ENST00000617767 ATP10AO60312 1499 aa7.31□□□□□ -1.24
CPNE4-214ENST00000617767 ABCA9Q8IUA7 1624 aa7.31□□□□□ -1.24
CPNE4-214ENST00000617767 UHRF1BP1Q6BDS2 1440 aa7.3□□□□□ -1.24
CPNE4-214ENST00000617767 TMF1P82094 1093 aa7.3□□□□□ -1.24
CPNE4-214ENST00000617767 FBXO31Q5XUX0 539 aaPredicted RBP7.3□□□□□ -1.24
CPNE4-214ENST00000617767 TESK2Q96S53 571 aa7.3□□□□□ -1.24
CPNE4-214ENST00000617767 GSE1Q14687 1217 aa7.3□□□□□ -1.24
CPNE4-214ENST00000617767 CEP152O94986 1710 aa7.3□□□□□ -1.24
CPNE4-214ENST00000617767 KIDINS220Q9ULH0 1771 aa7.3□□□□□ -1.24
CPNE4-214ENST00000617767 SAMD1Q6SPF0 538 aaPredicted RBP7.3□□□□□ -1.24
CPNE4-214ENST00000617767 CLTCL1P53675 1640 aa7.29□□□□□ -1.24
CPNE4-214ENST00000617767 TRPM1Q7Z4N2 1603 aa7.29□□□□□ -1.24
CPNE4-214ENST00000617767 CANXP27824 592 aaKnown RBP7.29□□□□□ -1.24
CPNE4-214ENST00000617767 IPO4Q8TEX9 1081 aaKnown RBP7.29□□□□□ -1.24
CPNE4-214ENST00000617767 STAG3Q9UJ98 1225 aa7.29□□□□□ -1.24
CPNE4-214ENST00000617767 YEATS2Q9ULM3 1422 aa7.29□□□□□ -1.24
CPNE4-214ENST00000617767 STAC3Q96MF2 364 aa7.29□□□□□ -1.24
CPNE4-214ENST00000617767 USP35Q9P2H5 1018 aa7.29□□□□□ -1.24
CPNE4-214ENST00000617767 ZNF518AQ6AHZ1 1483 aa7.28□□□□□ -1.24
CPNE4-214ENST00000617767 ZFP91Q96JP5 570 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-214ENST00000617767 RTEL1-TNFRSF6BF6WH68 1400 aa7.28□□□□□ -1.24
CPNE4-214ENST00000617767 SPHKAPQ2M3C7 1700 aa7.28□□□□□ -1.24
CPNE4-214ENST00000617767 ARID4BQ4LE39 1312 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-214ENST00000617767 INO80Q9ULG1 1556 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-214ENST00000617767 NOS1P29475 1434 aa7.27□□□□□ -1.25
CPNE4-214ENST00000617767 PLCD3Q8N3E9 789 aa7.27□□□□□ -1.25
CPNE4-214ENST00000617767 KNSTRNQ9Y448 316 aa7.27□□□□□ -1.25
CPNE4-214ENST00000617767 POLR1AO95602 1720 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-214ENST00000617767 POGZQ7Z3K3 1410 aa7.27□□□□□ -1.25
CPNE4-214ENST00000617767 CALD1Q05682 793 aaKnown RBP7.27□□□□□ -1.25
CPNE4-214ENST00000617767 B4GALNT3Q6L9W6 998 aa7.27□□□□□ -1.25
CPNE4-214ENST00000617767 FRAT1Q92837 279 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-214ENST00000617767 PRDM15P57071 1507 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-214ENST00000617767 PNISRQ8TF01 805 aaKnown RBP7.26□□□□□ -1.25
CPNE4-214ENST00000617767 RRAGDQ9NQL2 400 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-214ENST00000617767 KTN1Q86UP2 1357 aaKnown RBP7.26□□□□□ -1.25
CPNE4-214ENST00000617767 IDI1Q13907 227 aa7.26□□□□□ -1.25
CPNE4-214ENST00000617767 CCDC146Q8IYE0 955 aa7.25□□□□□ -1.25
CPNE4-214ENST00000617767 MAGI2Q86UL8 1455 aa7.25□□□□□ -1.25
CPNE4-214ENST00000617767 NPATQ14207 1427 aa7.25□□□□□ -1.25
CPNE4-214ENST00000617767 MYBBP1AQ9BQG0 1328 aaKnown RBP7.25□□□□□ -1.25
CPNE4-214ENST00000617767 PPRC1Q5VV67 1664 aaKnown RBP7.25□□□□□ -1.25
CPNE4-214ENST00000617767 CDCA7LQ96GN5 454 aa7.25□□□□□ -1.25
CPNE4-214ENST00000617767 RIMBP3CA6NJZ7 1639 aa7.25□□□□□ -1.25
CPNE4-214ENST00000617767 RIMBP3BA6NNM3 1639 aa7.25□□□□□ -1.25
CPNE4-214ENST00000617767 RIMBP3Q9UFD9 1639 aa7.25□□□□□ -1.25
CPNE4-214ENST00000617767 PER1O15534 1290 aaPredicted RBP7.25□□□□□ -1.25
CPNE4-214ENST00000617767 SLC12A5Q9H2X9 1139 aa7.24□□□□□ -1.25
CPNE4-214ENST00000617767 TET3O43151 1660 aa7.24□□□□□ -1.25
CPNE4-214ENST00000617767 ABCA6Q8N139 1617 aa7.24□□□□□ -1.25
CPNE4-214ENST00000617767 HOMEZQ8IX15 550 aa7.24□□□□□ -1.25
CPNE4-214ENST00000617767 TRPM2O94759 1503 aa7.24□□□□□ -1.25
CPNE4-214ENST00000617767 MROH1Q8NDA8 1641 aa7.24□□□□□ -1.25
CPNE4-214ENST00000617767 ZBED9Q6R2W3 1325 aa7.24□□□□□ -1.25
CPNE4-214ENST00000617767 MROH2AA6NES4 1674 aa7.23□□□□□ -1.25
CPNE4-214ENST00000617767 KIF1BO60333 1816 aa7.23□□□□□ -1.25
CPNE4-214ENST00000617767 NEUROD2Q15784 382 aa7.23□□□□□ -1.25
CPNE4-214ENST00000617767 CABP2Q9NPB3 220 aa7.23□□□□□ -1.25
CPNE4-214ENST00000617767 ARAP3Q8WWN8 1544 aa7.23□□□□□ -1.25
CPNE4-214ENST00000617767 HECW2Q9P2P5 1572 aa7.23□□□□□ -1.25
CPNE4-214ENST00000617767 TRHP20396 242 aaPredicted RBP7.23□□□□□ -1.25
CPNE4-214ENST00000617767 NLRP13Q86W25 1043 aa7.23□□□□□ -1.25
CPNE4-214ENST00000617767 FRMPD1Q5SYB0 1578 aa7.23□□□□□ -1.25
CPNE4-214ENST00000617767 RALBP1Q15311 655 aa7.23□□□□□ -1.25
CPNE4-214ENST00000617767 SECISBP2LQ93073 1101 aaKnown RBP7.23□□□□□ -1.25
CPNE4-214ENST00000617767 MADDQ8WXG6 1647 aa7.23□□□□□ -1.25
CPNE4-214ENST00000617767 MINK1Q8N4C8 1332 aaPredicted RBP7.22□□□□□ -1.25
CPNE4-214ENST00000617767 COL17A1Q9UMD9 1497 aaPredicted RBP7.22□□□□□ -1.25
CPNE4-214ENST00000617767 ESF1Q9H501 851 aaKnown RBP7.22□□□□□ -1.25
CPNE4-214ENST00000617767 ADAMTS8Q9UP79 889 aa7.22□□□□□ -1.25
CPNE4-214ENST00000617767 NPM2Q86SE8 214 aaKnown RBP7.22□□□□□ -1.25
CPNE4-214ENST00000617767 PNNQ9H307 717 aaKnown RBP7.22□□□□□ -1.25
CPNE4-214ENST00000617767 PPP4R2Q9NY27 417 aa7.22□□□□□ -1.25
CPNE4-214ENST00000617767 PTPRTO14522 1441 aa7.22□□□□□ -1.25
CPNE4-214ENST00000617767 DEPDC5O75140 1603 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms