RNA–Protein interactions for RNA: ENST00000617719.4

ATXN3-251, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-251ENST00000617719 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.16□□□□□ -0.94
ATXN3-251ENST00000617719 FCHSD2O94868 740 aa9.15□□□□□ -0.94
ATXN3-251ENST00000617719 ZPR1O75312 459 aa9.14□□□□□ -0.95
ATXN3-251ENST00000617719 RBM26Q5T8P6 1007 aaKnown RBP9.14□□□□□ -0.95
ATXN3-251ENST00000617719 BLOC1S3Q6QNY0 202 aa9.14□□□□□ -0.95
ATXN3-251ENST00000617719 PCDHB3Q9Y5E6 796 aa9.14□□□□□ -0.95
ATXN3-251ENST00000617719 TESPA1A2RU30 521 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-251ENST00000617719 GFRA3O60609 400 aa9.11□□□□□ -0.95
ATXN3-251ENST00000617719 SLC10A3P09131 477 aa9.11□□□□□ -0.95
ATXN3-251ENST00000617719 PRR14Q9BWN1 585 aa9.11□□□□□ -0.95
ATXN3-251ENST00000617719 LCE2BO14633 110 aa9.1□□□□□ -0.95
ATXN3-251ENST00000617719 TLL1O43897 1013 aa9.1□□□□□ -0.95
ATXN3-251ENST00000617719 CFHP08603 1231 aa9.1□□□□□ -0.95
ATXN3-251ENST00000617719 FECHP22830 423 aa9.1□□□□□ -0.95
ATXN3-251ENST00000617719 PXYLP1Q8TE99 480 aa9.1□□□□□ -0.95
ATXN3-251ENST00000617719 V9GY48 417 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-251ENST00000617719 NACADO15069 1562 aa9.09□□□□□ -0.95
ATXN3-251ENST00000617719 RB1CC1Q8TDY2 1594 aa9.09□□□□□ -0.95
ATXN3-251ENST00000617719 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.08□□□□□ -0.96
ATXN3-251ENST00000617719 HIC1Q14526 733 aa9.08□□□□□ -0.96
ATXN3-251ENST00000617719 GPR37O15354 613 aa9.07□□□□□ -0.96
ATXN3-251ENST00000617719 ACTN4O43707 911 aaKnown RBP9.07□□□□□ -0.96
ATXN3-251ENST00000617719 OATP04181 439 aa9.07□□□□□ -0.96
ATXN3-251ENST00000617719 GGCXP38435 758 aa9.07□□□□□ -0.96
ATXN3-251ENST00000617719 LAPTM4AQ15012 233 aa9.07□□□□□ -0.96
ATXN3-251ENST00000617719 METTL3Q86U44 580 aaKnown RBP9.07□□□□□ -0.96
ATXN3-251ENST00000617719 MYO15BQ96JP2 1530 aa9.06□□□□□ -0.96
ATXN3-251ENST00000617719 RNF223E7ERA6 249 aa9.06□□□□□ -0.96
ATXN3-251ENST00000617719 KMT5BQ4FZB7 885 aa9.06□□□□□ -0.96
ATXN3-251ENST00000617719 TMUB1Q9BVT8 246 aa9.06□□□□□ -0.96
ATXN3-251ENST00000617719 EMID1Q96A84 441 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-251ENST00000617719 GNPATO15228 680 aa9.04□□□□□ -0.96
ATXN3-251ENST00000617719 HAP1P54257 671 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-251ENST00000617719 NLRP7Q8WX94 980 aa9.04□□□□□ -0.96
ATXN3-251ENST00000617719 KDM2AQ9Y2K7 1162 aa9.04□□□□□ -0.96
ATXN3-251ENST00000617719 NRG2O14511 850 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-251ENST00000617719 SMYD5Q6GMV2 418 aa9.03□□□□□ -0.96
ATXN3-251ENST00000617719 PPEF1O14829 653 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-251ENST00000617719 S1PR4O95977 384 aa9.02□□□□□ -0.97
ATXN3-251ENST00000617719 PDZRN3Q9UPQ7 1066 aa9.02□□□□□ -0.97
ATXN3-251ENST00000617719 PUS10Q3MIT2 529 aaKnown RBP9.01□□□□□ -0.97
ATXN3-251ENST00000617719 TRAF7Q6Q0C0 670 aa9.01□□□□□ -0.97
ATXN3-251ENST00000617719 PHOX2BQ99453 314 aa9□□□□□ -0.97
ATXN3-251ENST00000617719 NR1I2O75469 434 aa8.99□□□□□ -0.97
ATXN3-251ENST00000617719 SLC19A1P41440 591 aa8.99□□□□□ -0.97
ATXN3-251ENST00000617719 SCUBE3Q8IX30 993 aa8.99□□□□□ -0.97
ATXN3-251ENST00000617719 ADH1BP00325 375 aa8.98□□□□□ -0.97
ATXN3-251ENST00000617719 TRIM67Q6ZTA4 783 aa8.98□□□□□ -0.97
ATXN3-251ENST00000617719 LIAT1Q6ZQX7 453 aa8.97□□□□□ -0.97
ATXN3-251ENST00000617719 ANKLE1Q8NAG6 615 aa8.97□□□□□ -0.97
ATXN3-251ENST00000617719 DAXXQ9UER7 740 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-251ENST00000617719 DCAF1Q9Y4B6 1507 aa8.96□□□□□ -0.97
ATXN3-251ENST00000617719 DDX11L8A8MPP1 907 aa8.96□□□□□ -0.98
ATXN3-251ENST00000617719 RSPH4AQ5TD94 716 aa8.96□□□□□ -0.98
ATXN3-251ENST00000617719 GPIHBP1Q8IV16 184 aa8.96□□□□□ -0.98
ATXN3-251ENST00000617719 RDH13Q8NBN7 331 aa8.96□□□□□ -0.98
ATXN3-251ENST00000617719 PLA2G2CQ5R387 149 aa8.95□□□□□ -0.98
ATXN3-251ENST00000617719 SPRYD7Q5W111 196 aa8.95□□□□□ -0.98
ATXN3-251ENST00000617719 SLC6A16Q9GZN6 736 aa8.95□□□□□ -0.98
ATXN3-251ENST00000617719 ZCCHC6Q5VYS8 1495 aaKnown RBP8.95□□□□□ -0.98
ATXN3-251ENST00000617719 FUT2Q10981 343 aa8.94□□□□□ -0.98
ATXN3-251ENST00000617719 SPSB2Q99619 263 aa8.93□□□□□ -0.98
ATXN3-251ENST00000617719 MORN1Q5T089 497 aa8.92□□□□□ -0.98
ATXN3-251ENST00000617719 ZNF598Q86UK7 904 aaKnown RBP8.92□□□□□ -0.98
ATXN3-251ENST00000617719 GCGRP47871 477 aa8.9□□□□□ -0.98
ATXN3-251ENST00000617719 ZNF697Q5TEC3 545 aa8.9□□□□□ -0.98
ATXN3-251ENST00000617719 THAP11Q96EK4 314 aa8.9□□□□□ -0.98
ATXN3-251ENST00000617719 ATP6V1AP38606 617 aa8.89□□□□□ -0.99
ATXN3-251ENST00000617719 SLC27A5Q9Y2P5 690 aa8.89□□□□□ -0.99
ATXN3-251ENST00000617719 TNFRSF10AO00220 468 aa8.88□□□□□ -0.99
ATXN3-251ENST00000617719 SULF1Q8IWU6 871 aa8.88□□□□□ -0.99
ATXN3-251ENST00000617719 FAM160A2Q8N612 972 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-251ENST00000617719 UNC13AQ9UPW8 1703 aa8.87□□□□□ -0.99
ATXN3-251ENST00000617719 BICRAQ9NZM4 1560 aa8.86□□□□□ -0.99
ATXN3-251ENST00000617719 GDF9O60383 454 aa8.86□□□□□ -0.99
ATXN3-251ENST00000617719 PRR20EP86478 221 aa8.86□□□□□ -0.99
ATXN3-251ENST00000617719 PRR20CP86479 221 aa8.86□□□□□ -0.99
ATXN3-251ENST00000617719 PRR20DP86480 221 aa8.86□□□□□ -0.99
ATXN3-251ENST00000617719 PRR20BP86481 221 aa8.86□□□□□ -0.99
ATXN3-251ENST00000617719 PRR20AP86496 221 aa8.86□□□□□ -0.99
ATXN3-251ENST00000617719 PRDM9Q9NQV7 894 aa8.86□□□□□ -0.99
ATXN3-251ENST00000617719 MAP2K5Q13163 448 aa8.85□□□□□ -0.99
ATXN3-251ENST00000617719 FCF1Q9Y324 198 aaKnown RBP8.85□□□□□ -0.99
ATXN3-251ENST00000617719 FMNL1O95466 1100 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-251ENST00000617719 PKDCCQ504Y2 493 aa8.84□□□□□ -0.99
ATXN3-251ENST00000617719 BRICD5Q6PL45 260 aa8.84□□□□□ -0.99
ATXN3-251ENST00000617719 VSIG10Q8N0Z9 540 aa8.84□□□□□ -0.99
ATXN3-251ENST00000617719 IRF6O14896 467 aa8.83□□□□□ -1
ATXN3-251ENST00000617719 MYT1Q01538 1121 aa8.83□□□□□ -1
ATXN3-251ENST00000617719 ZNF787Q6DD87 383 aa8.83□□□□□ -1
ATXN3-251ENST00000617719 RNF19BQ6ZMZ0 732 aa8.83□□□□□ -1
ATXN3-251ENST00000617719 PKD2L1Q9P0L9 805 aa8.83□□□□□ -1
ATXN3-251ENST00000617719 CD46P15529 392 aa8.82□□□□□ -1
ATXN3-251ENST00000617719 FOXC1Q12948 553 aa8.82□□□□□ -1
ATXN3-251ENST00000617719 FAM187AA6NFU0 413 aa8.81□□□□□ -1
ATXN3-251ENST00000617719 DGAT1O75907 488 aa8.81□□□□□ -1
ATXN3-251ENST00000617719 MDM2Q00987 491 aaPredicted RBP8.81□□□□□ -1
ATXN3-251ENST00000617719 SALL2Q9Y467 1007 aaPredicted RBP8.81□□□□□ -1
ATXN3-251ENST00000617719 POTECB2RU33 542 aa8.79□□□□□ -1
ATXN3-251ENST00000617719 HLA-CQ95604 372 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms