RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 DUSP27Q5VZP5 1158 aa22.96■■□□□ 1.27
DDX1-207ENST00000617198 SCAPERQ9BY12 1400 aa22.96■■□□□ 1.27
DDX1-207ENST00000617198 TRAPPC8Q9Y2L5 1435 aa22.96■■□□□ 1.27
DDX1-207ENST00000617198 ZNF521Q96K83 1311 aa22.95■■□□□ 1.26
DDX1-207ENST00000617198 ASXL1Q8IXJ9 1541 aa22.95■■□□□ 1.26
DDX1-207ENST00000617198 KDM2BQ8NHM5 1336 aa22.94■■□□□ 1.26
DDX1-207ENST00000617198 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
DDX1-207ENST00000617198 PIK3C2GO75747 1445 aa22.93■■□□□ 1.26
DDX1-207ENST00000617198 GOLGA2Q08379 1002 aa22.93■■□□□ 1.26
DDX1-207ENST00000617198 ZCCHC11Q5TAX3 1644 aaKnown RBP22.93■■□□□ 1.26
DDX1-207ENST00000617198 PTPRTO14522 1441 aa22.92■■□□□ 1.26
DDX1-207ENST00000617198 SKAP1Q86WV1 359 aa22.92■■□□□ 1.26
DDX1-207ENST00000617198 USP35Q9P2H5 1018 aa22.91■■□□□ 1.26
DDX1-207ENST00000617198 NPC1L1Q9UHC9 1359 aa22.91■■□□□ 1.26
DDX1-207ENST00000617198 CLTCL1P53675 1640 aa22.91■■□□□ 1.26
DDX1-207ENST00000617198 CENPQQ7L2Z9 268 aaPredicted RBP22.91■■□□□ 1.26
DDX1-207ENST00000617198 DDRGK1Q96HY6 314 aa22.91■■□□□ 1.26
DDX1-207ENST00000617198 MYOM1P52179 1685 aa22.9■■□□□ 1.26
DDX1-207ENST00000617198 RTEL1-TNFRSF6BF6WH68 1400 aa22.9■■□□□ 1.26
DDX1-207ENST00000617198 LAS1LQ9Y4W2 734 aaKnown RBP22.9■■□□□ 1.26
DDX1-207ENST00000617198 SPAG9O60271 1321 aaKnown RBP22.89■■□□□ 1.26
DDX1-207ENST00000617198 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.89■■□□□ 1.25
DDX1-207ENST00000617198 EIF3AQ14152 1382 aaKnown RBP22.88■■□□□ 1.25
DDX1-207ENST00000617198 PPM1GO15355 546 aaPredicted RBP22.88■■□□□ 1.25
DDX1-207ENST00000617198 DEPDC5O75140 1603 aa22.87■■□□□ 1.25
DDX1-207ENST00000617198 NEFMP07197 916 aa22.87■■□□□ 1.25
DDX1-207ENST00000617198 ZFYVE16Q7Z3T8 1539 aa22.87■■□□□ 1.25
DDX1-207ENST00000617198 SLFN5Q08AF3 891 aa22.86■■□□□ 1.25
DDX1-207ENST00000617198 KIAA1210Q9ULL0 1709 aa22.86■■□□□ 1.25
DDX1-207ENST00000617198 TET3O43151 1660 aa22.86■■□□□ 1.25
DDX1-207ENST00000617198 UHRF1BP1LA0JNW5 1464 aa22.86■■□□□ 1.25
DDX1-207ENST00000617198 KDM5AP29375 1690 aaKnown RBP22.85■■□□□ 1.25
DDX1-207ENST00000617198 TRMT2AQ8IZ69 625 aaKnown RBP22.83■■□□□ 1.25
DDX1-207ENST00000617198 AFAP1Q8N556 730 aa22.83■■□□□ 1.24
DDX1-207ENST00000617198 ARAP3Q8WWN8 1544 aa22.82■■□□□ 1.24
DDX1-207ENST00000617198 NEURL4Q96JN8 1562 aa22.81■■□□□ 1.24
DDX1-207ENST00000617198 SLC24A1O60721 1099 aa22.8■■□□□ 1.24
DDX1-207ENST00000617198 CCDC146Q8IYE0 955 aa22.8■■□□□ 1.24
DDX1-207ENST00000617198 KANK1Q14678 1352 aa22.8■■□□□ 1.24
DDX1-207ENST00000617198 VWDEQ8N2E2 1590 aa22.79■■□□□ 1.24
DDX1-207ENST00000617198 NKTRP30414 1462 aaKnown RBP22.79■■□□□ 1.24
DDX1-207ENST00000617198 FAM161AQ3B820 660 aa22.78■■□□□ 1.24
DDX1-207ENST00000617198 APAF1O14727 1248 aa22.77■■□□□ 1.23
DDX1-207ENST00000617198 MAP3K4Q9Y6R4 1608 aa22.76■■□□□ 1.23
DDX1-207ENST00000617198 C8orf34Q49A92 452 aa22.75■■□□□ 1.23
DDX1-207ENST00000617198 MYOM2P54296 1465 aa22.75■■□□□ 1.23
DDX1-207ENST00000617198 ERVK-7P63135 1459 aa22.75■■□□□ 1.23
DDX1-207ENST00000617198 ATP7AQ04656 1500 aa22.75■■□□□ 1.23
DDX1-207ENST00000617198 SPINK5Q9NQ38 1064 aaPredicted RBP22.75■■□□□ 1.23
DDX1-207ENST00000617198 INO80Q9ULG1 1556 aaPredicted RBP22.74■■□□□ 1.23
DDX1-207ENST00000617198 E9PSI1 815 aa22.74■■□□□ 1.23
DDX1-207ENST00000617198 NGEFQ8N5V2 710 aa22.74■■□□□ 1.23
DDX1-207ENST00000617198 ABCA6Q8N139 1617 aa22.73■■□□□ 1.23
DDX1-207ENST00000617198 CFAP70Q5T0N1 1121 aa22.73■■□□□ 1.23
DDX1-207ENST00000617198 KIF3BO15066 747 aa22.7■■□□□ 1.22
DDX1-207ENST00000617198 DAXXQ9UER7 740 aaPredicted RBP22.7■■□□□ 1.22
DDX1-207ENST00000617198 CARD14Q9BXL6 1004 aa22.7■■□□□ 1.22
DDX1-207ENST00000617198 BCAR3O75815 825 aa22.69■■□□□ 1.22
DDX1-207ENST00000617198 KIF1BO60333 1816 aa22.69■■□□□ 1.22
DDX1-207ENST00000617198 ADGRF5Q8IZF2 1346 aa22.68■■□□□ 1.22
DDX1-207ENST00000617198 ABCA9Q8IUA7 1624 aa22.68■■□□□ 1.22
DDX1-207ENST00000617198 UGGT1Q9NYU2 1555 aa22.68■■□□□ 1.22
DDX1-207ENST00000617198 RGS3P49796 1198 aa22.68■■□□□ 1.22
DDX1-207ENST00000617198 FANCAO15360 1455 aa22.67■■□□□ 1.22
DDX1-207ENST00000617198 IFT172Q9UG01 1749 aa22.67■■□□□ 1.22
DDX1-207ENST00000617198 MROH1Q8NDA8 1641 aa22.67■■□□□ 1.22
DDX1-207ENST00000617198 SLC4A3P48751 1232 aa22.66■■□□□ 1.22
DDX1-207ENST00000617198 MYO3AQ8NEV4 1616 aa22.66■■□□□ 1.22
DDX1-207ENST00000617198 POLR3AO14802 1390 aaPredicted RBP22.65■■□□□ 1.22
DDX1-207ENST00000617198 SBNO2Q9Y2G9 1366 aa22.65■■□□□ 1.22
DDX1-207ENST00000617198 NFKBIBQ15653 356 aa22.64■■□□□ 1.22
DDX1-207ENST00000617198 DMRT2Q9Y5R5 561 aa22.64■■□□□ 1.22
DDX1-207ENST00000617198 PDE3AQ14432 1141 aa22.64■■□□□ 1.21
DDX1-207ENST00000617198 CGNL1Q0VF96 1302 aa22.63■■□□□ 1.21
DDX1-207ENST00000617198 NINLQ9Y2I6 1382 aa22.63■■□□□ 1.21
DDX1-207ENST00000617198 EFCAB6Q5THR3 1501 aa22.63■■□□□ 1.21
DDX1-207ENST00000617198 NRXN1Q9ULB1 1477 aa22.63■■□□□ 1.21
DDX1-207ENST00000617198 MROH2AA6NES4 1674 aa22.61■■□□□ 1.21
DDX1-207ENST00000617198 WWC1Q8IX03 1113 aa22.61■■□□□ 1.21
DDX1-207ENST00000617198 CENPJQ9HC77 1338 aaPredicted RBP22.61■■□□□ 1.21
DDX1-207ENST00000617198 ADGRL1O94910 1474 aa22.6■■□□□ 1.21
DDX1-207ENST00000617198 IGHDP01880 384 aa22.6■■□□□ 1.21
DDX1-207ENST00000617198 VIRMAQ69YN4 1812 aaKnown RBP22.59■■□□□ 1.21
DDX1-207ENST00000617198 SETBP1Q9Y6X0 1596 aa22.58■■□□□ 1.21
DDX1-207ENST00000617198 GSE1Q14687 1217 aa22.58■■□□□ 1.21
DDX1-207ENST00000617198 PPRC1Q5VV67 1664 aaKnown RBP22.57■■□□□ 1.2
DDX1-207ENST00000617198 IL27Q8NEV9 243 aa22.57■■□□□ 1.2
DDX1-207ENST00000617198 SHPRHQ149N8 1683 aa22.57■■□□□ 1.2
DDX1-207ENST00000617198 CLUAP1Q96AJ1 413 aa22.56■■□□□ 1.2
DDX1-207ENST00000617198 NSD3Q9BZ95 1437 aa22.56■■□□□ 1.2
DDX1-207ENST00000617198 CANXP27824 592 aaKnown RBP22.56■■□□□ 1.2
DDX1-207ENST00000617198 ADGRB3O60242 1522 aa22.55■■□□□ 1.2
DDX1-207ENST00000617198 LMTK2Q8IWU2 1503 aa22.55■■□□□ 1.2
DDX1-207ENST00000617198 MORC1Q86VD1 984 aa22.55■■□□□ 1.2
DDX1-207ENST00000617198 NOS1P29475 1434 aa22.55■■□□□ 1.2
DDX1-207ENST00000617198 MAPK8IP3Q9UPT6 1336 aa22.54■■□□□ 1.2
DDX1-207ENST00000617198 COG6Q9Y2V7 657 aa22.54■■□□□ 1.2
DDX1-207ENST00000617198 PANK1Q8TE04 598 aa22.53■■□□□ 1.2
DDX1-207ENST00000617198 RUNDC1Q96C34 613 aa22.53■■□□□ 1.2
DDX1-207ENST00000617198 ZC3H13Q5T200 1668 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms