RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 RRP7BPQ9NSQ0 103 aa16■□□□□ 0.15
RABGAP1-213ENST00000616002 STAG3Q9UJ98 1225 aa16■□□□□ 0.15
RABGAP1-213ENST00000616002 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
RABGAP1-213ENST00000616002 KANK1Q14678 1352 aa15.97■□□□□ 0.15
RABGAP1-213ENST00000616002 NPM3O75607 178 aaKnown RBP15.97■□□□□ 0.15
RABGAP1-213ENST00000616002 TIMELESSQ9UNS1 1208 aa15.97■□□□□ 0.15
RABGAP1-213ENST00000616002 TMEM2Q9UHN6 1383 aa15.97■□□□□ 0.15
RABGAP1-213ENST00000616002 ABCC5O15440 1437 aa15.96■□□□□ 0.15
RABGAP1-213ENST00000616002 PIK3C2BO00750 1634 aa15.96■□□□□ 0.15
RABGAP1-213ENST00000616002 CROCC2H7BZ55 1655 aa15.96■□□□□ 0.15
RABGAP1-213ENST00000616002 XIRP1Q702N8 1843 aaKnown RBP15.95■□□□□ 0.14
RABGAP1-213ENST00000616002 PTPN23Q9H3S7 1636 aa15.94■□□□□ 0.14
RABGAP1-213ENST00000616002 EFCAB6Q5THR3 1501 aa15.93■□□□□ 0.14
RABGAP1-213ENST00000616002 TPRNQ4KMQ1 711 aa15.93■□□□□ 0.14
RABGAP1-213ENST00000616002 DAPK1P53355 1430 aa15.93■□□□□ 0.14
RABGAP1-213ENST00000616002 RRBP1Q9P2E9 1410 aaKnown RBP15.93■□□□□ 0.14
RABGAP1-213ENST00000616002 FKBP8Q14318 412 aa15.92■□□□□ 0.14
RABGAP1-213ENST00000616002 TMEM94Q12767 1356 aa15.92■□□□□ 0.14
RABGAP1-213ENST00000616002 FAM135BQ49AJ0 1406 aa15.92■□□□□ 0.14
RABGAP1-213ENST00000616002 HAP1P54257 671 aaPredicted RBP15.92■□□□□ 0.14
RABGAP1-213ENST00000616002 IDI1Q13907 227 aa15.92■□□□□ 0.14
RABGAP1-213ENST00000616002 RGS17Q9UGC6 210 aaPredicted RBP15.92■□□□□ 0.14
RABGAP1-213ENST00000616002 DHX57Q6P158 1386 aaKnown RBP15.91■□□□□ 0.14
RABGAP1-213ENST00000616002 KDM5AP29375 1690 aaKnown RBP15.91■□□□□ 0.14
RABGAP1-213ENST00000616002 KCNA6P17658 529 aa15.91■□□□□ 0.14
RABGAP1-213ENST00000616002 ANKRD30AQ9BXX3 1397 aa15.91■□□□□ 0.14
RABGAP1-213ENST00000616002 PROSER2Q86WR7 435 aaPredicted RBP15.9■□□□□ 0.14
RABGAP1-213ENST00000616002 SLC26A8Q96RN1 970 aa15.9■□□□□ 0.14
RABGAP1-213ENST00000616002 CHIC2Q9UKJ5 165 aa15.9■□□□□ 0.14
RABGAP1-213ENST00000616002 LMTK2Q8IWU2 1503 aa15.89■□□□□ 0.13
RABGAP1-213ENST00000616002 FGD6Q6ZV73 1430 aa15.88■□□□□ 0.13
RABGAP1-213ENST00000616002 RBM33Q96EV2 1170 aaKnown RBP15.87■□□□□ 0.13
RABGAP1-213ENST00000616002 TET3O43151 1660 aa15.86■□□□□ 0.13
RABGAP1-213ENST00000616002 NOS1P29475 1434 aa15.86■□□□□ 0.13
RABGAP1-213ENST00000616002 ROBO1Q9Y6N7 1651 aa15.85■□□□□ 0.13
RABGAP1-213ENST00000616002 ADGRB3O60242 1522 aa15.85■□□□□ 0.13
RABGAP1-213ENST00000616002 SLC52A1Q9NWF4 448 aa15.85■□□□□ 0.13
RABGAP1-213ENST00000616002 NKTRP30414 1462 aaKnown RBP15.84■□□□□ 0.13
RABGAP1-213ENST00000616002 MSH6P52701 1360 aa15.84■□□□□ 0.13
RABGAP1-213ENST00000616002 YTHDC1Q96MU7 727 aaKnown RBP15.83■□□□□ 0.13
RABGAP1-213ENST00000616002 TULP1O00294 542 aaPredicted RBP15.83■□□□□ 0.12
RABGAP1-213ENST00000616002 POTEAQ6S8J7 498 aa15.83■□□□□ 0.12
RABGAP1-213ENST00000616002 NWD1Q149M9 1564 aa15.82■□□□□ 0.12
RABGAP1-213ENST00000616002 SLAIN2Q9P270 581 aa15.81■□□□□ 0.12
RABGAP1-213ENST00000616002 PPP1R15AO75807 674 aaPredicted RBP15.8■□□□□ 0.12
RABGAP1-213ENST00000616002 HDGFP51858 240 aaKnown RBP15.8■□□□□ 0.12
RABGAP1-213ENST00000616002 RPRD2Q5VT52 1461 aaKnown RBP15.8■□□□□ 0.12
RABGAP1-213ENST00000616002 ADGRL2O95490 1459 aa15.79■□□□□ 0.12
RABGAP1-213ENST00000616002 PLEKHG1Q9ULL1 1385 aa15.78■□□□□ 0.12
RABGAP1-213ENST00000616002 FAM50AQ14320 339 aaKnown RBP15.78■□□□□ 0.12
RABGAP1-213ENST00000616002 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
RABGAP1-213ENST00000616002 ANKRD50Q9ULJ7 1429 aa15.78■□□□□ 0.12
RABGAP1-213ENST00000616002 PHLPP1O60346 1717 aa15.77■□□□□ 0.12
RABGAP1-213ENST00000616002 ZFYVE9O95405 1425 aa15.77■□□□□ 0.11
RABGAP1-213ENST00000616002 JCADQ9P266 1359 aa15.76■□□□□ 0.11
RABGAP1-213ENST00000616002 RIMS2Q9UQ26 1411 aa15.76■□□□□ 0.11
RABGAP1-213ENST00000616002 C14orf37Q86TY3 774 aa15.75■□□□□ 0.11
RABGAP1-213ENST00000616002 CHD2O14647 1828 aaKnown RBP15.75■□□□□ 0.11
RABGAP1-213ENST00000616002 MYO5BQ9ULV0 1848 aa15.75■□□□□ 0.11
RABGAP1-213ENST00000616002 GCC2Q8IWJ2 1684 aa15.74■□□□□ 0.11
RABGAP1-213ENST00000616002 CHGAP10645 457 aaKnown RBP15.74■□□□□ 0.11
RABGAP1-213ENST00000616002 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.74■□□□□ 0.11
RABGAP1-213ENST00000616002 TBX22Q9Y458 520 aa15.74■□□□□ 0.11
RABGAP1-213ENST00000616002 TMEM131LA2VDJ0 1609 aa15.73■□□□□ 0.11
RABGAP1-213ENST00000616002 NCOA3Q9Y6Q9 1424 aa15.72■□□□□ 0.11
RABGAP1-213ENST00000616002 SUPT16HQ9Y5B9 1047 aaKnown RBP15.7■□□□□ 0.1
RABGAP1-213ENST00000616002 COL16A1Q07092 1604 aaPredicted RBP15.7■□□□□ 0.1
RABGAP1-213ENST00000616002 MEX3CQ5U5Q3 659 aaKnown RBP15.7■□□□□ 0.1
RABGAP1-213ENST00000616002 NUTM2DQ5VT03 806 aaPredicted RBP15.7■□□□□ 0.1
RABGAP1-213ENST00000616002 CADPS2Q86UW7 1296 aa15.7■□□□□ 0.1
RABGAP1-213ENST00000616002 SETD1AO15047 1707 aaKnown RBP15.69■□□□□ 0.1
RABGAP1-213ENST00000616002 ATF3P18847 181 aa15.69■□□□□ 0.1
RABGAP1-213ENST00000616002 SPATA31A6Q5VVP1 1343 aa15.69■□□□□ 0.1
RABGAP1-213ENST00000616002 C19orf44Q9H6X5 657 aa15.69■□□□□ 0.1
RABGAP1-213ENST00000616002 UNC13BO14795 1591 aa15.68■□□□□ 0.1
RABGAP1-213ENST00000616002 ADAMTS13Q76LX8 1427 aa15.67■□□□□ 0.1
RABGAP1-213ENST00000616002 PIK3R4Q99570 1358 aa15.67■□□□□ 0.1
RABGAP1-213ENST00000616002 DIP2AQ14689 1571 aa15.67■□□□□ 0.1
RABGAP1-213ENST00000616002 ZNF772Q68DY9 489 aaPredicted RBP15.66■□□□□ 0.1
RABGAP1-213ENST00000616002 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.66■□□□□ 0.1
RABGAP1-213ENST00000616002 E9PCH4 1651 aa15.66■□□□□ 0.1
RABGAP1-213ENST00000616002 LRP6O75581 1613 aa15.65■□□□□ 0.1
RABGAP1-213ENST00000616002 AHDC1Q5TGY3 1603 aaPredicted RBP15.64■□□□□ 0.09
RABGAP1-213ENST00000616002 HOMEZQ8IX15 550 aa15.64■□□□□ 0.09
RABGAP1-213ENST00000616002 AMOTL2Q9Y2J4 779 aa15.64■□□□□ 0.09
RABGAP1-213ENST00000616002 TRPM2O94759 1503 aa15.63■□□□□ 0.09
RABGAP1-213ENST00000616002 VSIG10Q8N0Z9 540 aa15.63■□□□□ 0.09
RABGAP1-213ENST00000616002 TRIM52Q96A61 297 aa15.62■□□□□ 0.09
RABGAP1-213ENST00000616002 ROCK1Q13464 1354 aa15.62■□□□□ 0.09
RABGAP1-213ENST00000616002 SHPRHQ149N8 1683 aa15.62■□□□□ 0.09
RABGAP1-213ENST00000616002 IQGAP3Q86VI3 1631 aa15.62■□□□□ 0.09
RABGAP1-213ENST00000616002 NUP155O75694 1391 aa15.61■□□□□ 0.09
RABGAP1-213ENST00000616002 BRINP3Q76B58 766 aa15.61■□□□□ 0.09
RABGAP1-213ENST00000616002 SETD5Q9C0A6 1442 aa15.6■□□□□ 0.09
RABGAP1-213ENST00000616002 NUTM2BA6NNL0 878 aaPredicted RBP15.6■□□□□ 0.09
RABGAP1-213ENST00000616002 NUTM2EB1AL46 878 aaPredicted RBP15.6■□□□□ 0.09
RABGAP1-213ENST00000616002 NUTM2AQ8IVF1 878 aaPredicted RBP15.6■□□□□ 0.09
RABGAP1-213ENST00000616002 DCCP43146 1447 aa15.59■□□□□ 0.09
RABGAP1-213ENST00000616002 PTPRUQ92729 1446 aa15.59■□□□□ 0.09
RABGAP1-213ENST00000616002 RXRBP28702 533 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms