RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	DIP2C	Q9Y2E4	1556 aa		12.89	□□□□□ -0.35
LRTOMT-222	ENST00000615940	SPAG9	O60271	1321 aa	Known RBP	12.89	□□□□□ -0.35
LRTOMT-222	ENST00000615940	GPATCH11	Q8N954	259 aa		12.89	□□□□□ -0.35
LRTOMT-222	ENST00000615940	STAC3	Q96MF2	364 aa		12.89	□□□□□ -0.35
LRTOMT-222	ENST00000615940	CHIC2	Q9UKJ5	165 aa		12.89	□□□□□ -0.35
LRTOMT-222	ENST00000615940	MLH3	Q9UHC1	1453 aa		12.88	□□□□□ -0.35
LRTOMT-222	ENST00000615940	PTPRK	Q15262	1439 aa		12.88	□□□□□ -0.35
LRTOMT-222	ENST00000615940	CLGN	O14967	610 aa		12.88	□□□□□ -0.35
LRTOMT-222	ENST00000615940	RGS22	Q8NE09	1264 aa		12.88	□□□□□ -0.35
LRTOMT-222	ENST00000615940	KCTD17	Q8N5Z5	321 aa		12.87	□□□□□ -0.35
LRTOMT-222	ENST00000615940	ZNF428	Q96B54	188 aa		12.87	□□□□□ -0.35
LRTOMT-222	ENST00000615940	MAST1	Q9Y2H9	1570 aa		12.87	□□□□□ -0.35
LRTOMT-222	ENST00000615940	C9orf84	Q5VXU9	1444 aa		12.87	□□□□□ -0.35
LRTOMT-222	ENST00000615940	PPM1G	O15355	546 aa	Predicted RBP	12.87	□□□□□ -0.35
LRTOMT-222	ENST00000615940	MAGI2	Q86UL8	1455 aa		12.86	□□□□□ -0.35
LRTOMT-222	ENST00000615940	PHF14	O94880	888 aa		12.85	□□□□□ -0.35
LRTOMT-222	ENST00000615940	TSPY4	P0CV99	314 aa		12.85	□□□□□ -0.35
LRTOMT-222	ENST00000615940	TSPY10	P0CW01	314 aa		12.85	□□□□□ -0.35
LRTOMT-222	ENST00000615940	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
LRTOMT-222	ENST00000615940	SHANK2	Q9UPX8	1470 aa		12.84	□□□□□ -0.35
LRTOMT-222	ENST00000615940	PLXNC1	O60486	1568 aa		12.84	□□□□□ -0.35
LRTOMT-222	ENST00000615940	RTEL1-TNFRSF6B	F6WH68	1400 aa		12.83	□□□□□ -0.36
LRTOMT-222	ENST00000615940	ATP10A	O60312	1499 aa		12.83	□□□□□ -0.36
LRTOMT-222	ENST00000615940	USP35	Q9P2H5	1018 aa		12.83	□□□□□ -0.36
LRTOMT-222	ENST00000615940	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
LRTOMT-222	ENST00000615940	RRP9	O43818	475 aa	Known RBP	12.82	□□□□□ -0.36
LRTOMT-222	ENST00000615940	RBM25	P49756	843 aa	Known RBP	12.82	□□□□□ -0.36
LRTOMT-222	ENST00000615940	RRP7BP	Q9NSQ0	103 aa		12.81	□□□□□ -0.36
LRTOMT-222	ENST00000615940	MTMR7	Q9Y216	660 aa		12.8	□□□□□ -0.36
LRTOMT-222	ENST00000615940	OS9	Q13438	667 aa	Predicted RBP	12.8	□□□□□ -0.36
LRTOMT-222	ENST00000615940	ADGRL2	O95490	1459 aa		12.8	□□□□□ -0.36
LRTOMT-222	ENST00000615940	A2M	P01023	1474 aa		12.8	□□□□□ -0.36
LRTOMT-222	ENST00000615940	NCOA1	Q15788	1441 aa		12.8	□□□□□ -0.36
LRTOMT-222	ENST00000615940	IL27	Q8NEV9	243 aa		12.79	□□□□□ -0.36
LRTOMT-222	ENST00000615940	C1orf115	Q9H7X2	142 aa		12.79	□□□□□ -0.36
LRTOMT-222	ENST00000615940	RERE	Q9P2R6	1566 aa		12.79	□□□□□ -0.36
LRTOMT-222	ENST00000615940	KIF15	Q9NS87	1388 aa		12.79	□□□□□ -0.36
LRTOMT-222	ENST00000615940	BCORL1	Q5H9F3	1711 aa		12.79	□□□□□ -0.36
LRTOMT-222	ENST00000615940	PATL2	C9JE40	543 aa	Known RBP	12.78	□□□□□ -0.36
LRTOMT-222	ENST00000615940	ANKRD30A	Q9BXX3	1397 aa		12.77	□□□□□ -0.36
LRTOMT-222	ENST00000615940	CFAP65	Q6ZU64	1925 aa	Known RBP	12.77	□□□□□ -0.36
LRTOMT-222	ENST00000615940	MMP14	P50281	582 aa		12.77	□□□□□ -0.37
LRTOMT-222	ENST00000615940	MLEC	Q14165	292 aa		12.77	□□□□□ -0.37
LRTOMT-222	ENST00000615940	GCC2	Q8IWJ2	1684 aa		12.77	□□□□□ -0.37
LRTOMT-222	ENST00000615940	DUOX2	Q9NRD8	1548 aa		12.76	□□□□□ -0.37
LRTOMT-222	ENST00000615940	FER1L4	A9Z1Z3	1794 aa		12.76	□□□□□ -0.37
LRTOMT-222	ENST00000615940	PCGF6	Q9BYE7	350 aa		12.76	□□□□□ -0.37
LRTOMT-222	ENST00000615940	DHX29	Q7Z478	1369 aa	Known RBP	12.76	□□□□□ -0.37
LRTOMT-222	ENST00000615940	CALD1	Q05682	793 aa	Known RBP	12.74	□□□□□ -0.37
LRTOMT-222	ENST00000615940	AGL	P35573	1532 aa		12.74	□□□□□ -0.37
LRTOMT-222	ENST00000615940	ROCK1	Q13464	1354 aa		12.74	□□□□□ -0.37
LRTOMT-222	ENST00000615940	KIF3B	O15066	747 aa		12.74	□□□□□ -0.37
LRTOMT-222	ENST00000615940	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.74	□□□□□ -0.37
LRTOMT-222	ENST00000615940	PRDM4	Q9UKN5	801 aa		12.74	□□□□□ -0.37
LRTOMT-222	ENST00000615940	MADD	Q8WXG6	1647 aa		12.74	□□□□□ -0.37
LRTOMT-222	ENST00000615940	EIF2AK4	Q9P2K8	1649 aa	Known RBP	12.74	□□□□□ -0.37
LRTOMT-222	ENST00000615940	ADAMTSL3	P82987	1691 aa		12.73	□□□□□ -0.37
LRTOMT-222	ENST00000615940	CEP152	O94986	1710 aa		12.73	□□□□□ -0.37
LRTOMT-222	ENST00000615940	HSP90AB4P	Q58FF6	505 aa		12.73	□□□□□ -0.37
LRTOMT-222	ENST00000615940	RIMS1	Q86UR5	1692 aa	Known RBP	12.72	□□□□□ -0.37
LRTOMT-222	ENST00000615940	C11orf95	C9JLR9	678 aa	Predicted RBP	12.72	□□□□□ -0.37
LRTOMT-222	ENST00000615940	NAIP	Q13075	1403 aa		12.72	□□□□□ -0.37
LRTOMT-222	ENST00000615940	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.72	□□□□□ -0.37
LRTOMT-222	ENST00000615940	GGT6	Q6P531	493 aa		12.72	□□□□□ -0.37
LRTOMT-222	ENST00000615940	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.72	□□□□□ -0.37
LRTOMT-222	ENST00000615940	ANKRD50	Q9ULJ7	1429 aa		12.72	□□□□□ -0.37
LRTOMT-222	ENST00000615940	MROH1	Q8NDA8	1641 aa		12.71	□□□□□ -0.37
LRTOMT-222	ENST00000615940	RNF17	Q9BXT8	1623 aa	Known RBP	12.71	□□□□□ -0.37
LRTOMT-222	ENST00000615940	CLTC	Q00610	1675 aa	Known RBP	12.71	□□□□□ -0.37
LRTOMT-222	ENST00000615940	KDM4A	O75164	1064 aa		12.71	□□□□□ -0.37
LRTOMT-222	ENST00000615940	ERBIN	Q96RT1	1412 aa		12.7	□□□□□ -0.38
LRTOMT-222	ENST00000615940	DEPDC5	O75140	1603 aa		12.7	□□□□□ -0.38
LRTOMT-222	ENST00000615940	KDM4F	A0A1W2PPD8	638 aa		12.7	□□□□□ -0.38
LRTOMT-222	ENST00000615940	HFM1	A2PYH4	1435 aa		12.69	□□□□□ -0.38
LRTOMT-222	ENST00000615940	ANP32B	Q92688	251 aa	Known RBP	12.69	□□□□□ -0.38
LRTOMT-222	ENST00000615940	BRPF1	P55201	1214 aa	Predicted RBP	12.68	□□□□□ -0.38
LRTOMT-222	ENST00000615940	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
LRTOMT-222	ENST00000615940	HSP90AA2P	Q14568	343 aa	Predicted RBP	12.68	□□□□□ -0.38
LRTOMT-222	ENST00000615940	EXOC8	Q8IYI6	725 aa		12.68	□□□□□ -0.38
LRTOMT-222	ENST00000615940	FANCI	Q9NVI1	1328 aa		12.67	□□□□□ -0.38
LRTOMT-222	ENST00000615940	UNC13B	O14795	1591 aa		12.67	□□□□□ -0.38
LRTOMT-222	ENST00000615940	PRDM15	P57071	1507 aa	Predicted RBP	12.66	□□□□□ -0.38
LRTOMT-222	ENST00000615940	C3	P01024	1663 aa		12.66	□□□□□ -0.38
LRTOMT-222	ENST00000615940	TMTC2	Q8N394	836 aa		12.65	□□□□□ -0.38
LRTOMT-222	ENST00000615940	SETD5	Q9C0A6	1442 aa		12.64	□□□□□ -0.39
LRTOMT-222	ENST00000615940	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.64	□□□□□ -0.39
LRTOMT-222	ENST00000615940	MROH2A	A6NES4	1674 aa		12.63	□□□□□ -0.39
LRTOMT-222	ENST00000615940	ZC3H13	Q5T200	1668 aa	Known RBP	12.63	□□□□□ -0.39
LRTOMT-222	ENST00000615940	LAS1L	Q9Y4W2	734 aa	Known RBP	12.63	□□□□□ -0.39
LRTOMT-222	ENST00000615940	CAMSAP1	Q5T5Y3	1602 aa		12.63	□□□□□ -0.39
LRTOMT-222	ENST00000615940	ABCC3	O15438	1527 aa		12.63	□□□□□ -0.39
LRTOMT-222	ENST00000615940	KDM5D	Q9BY66	1539 aa		12.63	□□□□□ -0.39
LRTOMT-222	ENST00000615940	IQGAP3	Q86VI3	1631 aa		12.62	□□□□□ -0.39
LRTOMT-222	ENST00000615940	RAB3GAP2	Q9H2M9	1393 aa		12.62	□□□□□ -0.39
LRTOMT-222	ENST00000615940	VWDE	Q8N2E2	1590 aa		12.62	□□□□□ -0.39
LRTOMT-222	ENST00000615940	HDAC5	Q9UQL6	1122 aa		12.62	□□□□□ -0.39
LRTOMT-222	ENST00000615940	WASHC2C	Q9Y4E1	1318 aa		12.62	□□□□□ -0.39
LRTOMT-222	ENST00000615940	CEBPA	P49715	358 aa	Predicted RBP	12.61	□□□□□ -0.39
LRTOMT-222	ENST00000615940	PTPRM	P28827	1452 aa		12.61	□□□□□ -0.39
LRTOMT-222	ENST00000615940	FOXD1	Q16676	465 aa		12.61	□□□□□ -0.39

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