RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 NUTM2BA6NNL0 878 aaPredicted RBP11.23□□□□□ -0.61
MUC1-227ENST00000615517 NUTM2EB1AL46 878 aaPredicted RBP11.23□□□□□ -0.61
MUC1-227ENST00000615517 NUTM2AQ8IVF1 878 aaPredicted RBP11.23□□□□□ -0.61
MUC1-227ENST00000615517 EP400Q96L91 3159 aa11.23□□□□□ -0.61
MUC1-227ENST00000615517 TSPY4P0CV99 314 aa11.22□□□□□ -0.61
MUC1-227ENST00000615517 TSPY10P0CW01 314 aa11.22□□□□□ -0.61
MUC1-227ENST00000615517 IDI1Q13907 227 aa11.21□□□□□ -0.61
MUC1-227ENST00000615517 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.61
MUC1-227ENST00000615517 ZRANB1Q9UGI0 708 aa11.21□□□□□ -0.61
MUC1-227ENST00000615517 ADRA2BP18089 450 aa11.2□□□□□ -0.62
MUC1-227ENST00000615517 RBM6P78332 1123 aaKnown RBP11.2□□□□□ -0.62
MUC1-227ENST00000615517 QTRT2Q9H974 415 aaKnown RBP11.2□□□□□ -0.62
MUC1-227ENST00000615517 STAG3Q9UJ98 1225 aa11.2□□□□□ -0.62
MUC1-227ENST00000615517 NHSL1Q5SYE7 1610 aa11.19□□□□□ -0.62
MUC1-227ENST00000615517 ADGRB3O60242 1522 aa11.19□□□□□ -0.62
MUC1-227ENST00000615517 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
MUC1-227ENST00000615517 DUOX2Q9NRD8 1548 aa11.18□□□□□ -0.62
MUC1-227ENST00000615517 ATAD2Q6PL18 1390 aa11.17□□□□□ -0.62
MUC1-227ENST00000615517 BRINP3Q76B58 766 aa11.17□□□□□ -0.62
MUC1-227ENST00000615517 C8orf37Q96NL8 207 aa11.16□□□□□ -0.62
MUC1-227ENST00000615517 SETD5Q9C0A6 1442 aa11.16□□□□□ -0.62
MUC1-227ENST00000615517 CADPS2Q86UW7 1296 aa11.15□□□□□ -0.62
MUC1-227ENST00000615517 BCANQ96GW7 911 aa11.15□□□□□ -0.62
MUC1-227ENST00000615517 ZFYVE9O95405 1425 aa11.15□□□□□ -0.62
MUC1-227ENST00000615517 ASXL1Q8IXJ9 1541 aa11.14□□□□□ -0.63
MUC1-227ENST00000615517 GCC2Q8IWJ2 1684 aa11.14□□□□□ -0.63
MUC1-227ENST00000615517 C19orf44Q9H6X5 657 aa11.14□□□□□ -0.63
MUC1-227ENST00000615517 NOS1P29475 1434 aa11.14□□□□□ -0.63
MUC1-227ENST00000615517 PLEKHG1Q9ULL1 1385 aa11.14□□□□□ -0.63
MUC1-227ENST00000615517 LRP5O75197 1615 aa11.13□□□□□ -0.63
MUC1-227ENST00000615517 ATF3P18847 181 aa11.13□□□□□ -0.63
MUC1-227ENST00000615517 C14orf37Q86TY3 774 aa11.13□□□□□ -0.63
MUC1-227ENST00000615517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.13□□□□□ -0.63
MUC1-227ENST00000615517 LMTK2Q8IWU2 1503 aa11.13□□□□□ -0.63
MUC1-227ENST00000615517 CROCC2H7BZ55 1655 aa11.12□□□□□ -0.63
MUC1-227ENST00000615517 PNPLA6Q8IY17 1366 aa11.12□□□□□ -0.63
MUC1-227ENST00000615517 ADAMTS13Q76LX8 1427 aa11.11□□□□□ -0.63
MUC1-227ENST00000615517 ERBINQ96RT1 1412 aa11.11□□□□□ -0.63
MUC1-227ENST00000615517 NGLY1Q96IV0 654 aa11.11□□□□□ -0.63
MUC1-227ENST00000615517 TBX22Q9Y458 520 aa11.11□□□□□ -0.63
MUC1-227ENST00000615517 TMEM131LA2VDJ0 1609 aa11.1□□□□□ -0.63
MUC1-227ENST00000615517 DDX17Q92841 729 aaKnown RBP11.1□□□□□ -0.63
MUC1-227ENST00000615517 KIF15Q9NS87 1388 aa11.1□□□□□ -0.63
MUC1-227ENST00000615517 MST1RQ04912 1400 aa11.09□□□□□ -0.63
MUC1-227ENST00000615517 RIMS2Q9UQ26 1411 aa11.09□□□□□ -0.63
MUC1-227ENST00000615517 LRRC59Q96AG4 307 aaKnown RBP11.09□□□□□ -0.63
MUC1-227ENST00000615517 BRWD3Q6RI45 1802 aa11.08□□□□□ -0.64
MUC1-227ENST00000615517 ADAMTS2O95450 1211 aa11.08□□□□□ -0.64
MUC1-227ENST00000615517 ATRNO75882 1429 aa11.08□□□□□ -0.64
MUC1-227ENST00000615517 PTPRUQ92729 1446 aa11.08□□□□□ -0.64
MUC1-227ENST00000615517 CCDC125Q86Z20 511 aa11.07□□□□□ -0.64
MUC1-227ENST00000615517 RRP7BPQ9NSQ0 103 aa11.07□□□□□ -0.64
MUC1-227ENST00000615517 SLC52A1Q9NWF4 448 aa11.07□□□□□ -0.64
MUC1-227ENST00000615517 DCCP43146 1447 aa11.07□□□□□ -0.64
MUC1-227ENST00000615517 KANK1Q14678 1352 aa11.06□□□□□ -0.64
MUC1-227ENST00000615517 PPP1R15AO75807 674 aaPredicted RBP11.06□□□□□ -0.64
MUC1-227ENST00000615517 PIAS4Q8N2W9 510 aaPredicted RBP11.06□□□□□ -0.64
MUC1-227ENST00000615517 USP21Q9UK80 565 aa11.06□□□□□ -0.64
MUC1-227ENST00000615517 TRPC5Q9UL62 973 aaPredicted RBP11.06□□□□□ -0.64
MUC1-227ENST00000615517 XRN1Q8IZH2 1706 aaKnown RBP11.06□□□□□ -0.64
MUC1-227ENST00000615517 MARF1Q9Y4F3 1742 aaKnown RBP11.06□□□□□ -0.64
MUC1-227ENST00000615517 PIK3R4Q99570 1358 aa11.05□□□□□ -0.64
MUC1-227ENST00000615517 MYOM3Q5VTT5 1437 aa11.05□□□□□ -0.64
MUC1-227ENST00000615517 AMOTL2Q9Y2J4 779 aa11.05□□□□□ -0.64
MUC1-227ENST00000615517 LAMC1P11047 1609 aa11.05□□□□□ -0.64
MUC1-227ENST00000615517 TRPM2O94759 1503 aa11.04□□□□□ -0.64
MUC1-227ENST00000615517 ABCC5O15440 1437 aa11.04□□□□□ -0.64
MUC1-227ENST00000615517 FNBP4Q8N3X1 1017 aaPredicted RBP11.04□□□□□ -0.64
MUC1-227ENST00000615517 NALCNQ8IZF0 1738 aa11.04□□□□□ -0.64
MUC1-227ENST00000615517 DEFB132Q7Z7B7 95 aa11.03□□□□□ -0.64
MUC1-227ENST00000615517 UNC13BO14795 1591 aa11.03□□□□□ -0.64
MUC1-227ENST00000615517 COL22A1Q8NFW1 1626 aaPredicted RBP11.02□□□□□ -0.64
MUC1-227ENST00000615517 NRXN3Q9Y4C0 1643 aa11.02□□□□□ -0.64
MUC1-227ENST00000615517 BLMP54132 1417 aaPredicted RBP11.01□□□□□ -0.65
MUC1-227ENST00000615517 BCL9LQ86UU0 1499 aa11.01□□□□□ -0.65
MUC1-227ENST00000615517 HDGFP51858 240 aaKnown RBP11.01□□□□□ -0.65
MUC1-227ENST00000615517 PTCH1Q13635 1447 aa11.01□□□□□ -0.65
MUC1-227ENST00000615517 RPRD2Q5VT52 1461 aaKnown RBP11□□□□□ -0.65
MUC1-227ENST00000615517 TNKS1BP1Q9C0C2 1729 aaKnown RBP11□□□□□ -0.65
MUC1-227ENST00000615517 GLI3P10071 1580 aa10.99□□□□□ -0.65
MUC1-227ENST00000615517 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.99□□□□□ -0.65
MUC1-227ENST00000615517 SPHKAPQ2M3C7 1700 aa10.98□□□□□ -0.65
MUC1-227ENST00000615517 PSDA5PKW4 1024 aaPredicted RBP10.98□□□□□ -0.65
MUC1-227ENST00000615517 KANK4Q5T7N3 995 aaPredicted RBP10.98□□□□□ -0.65
MUC1-227ENST00000615517 SOS2Q07890 1332 aaPredicted RBP10.98□□□□□ -0.65
MUC1-227ENST00000615517 DAPK1P53355 1430 aa10.98□□□□□ -0.65
MUC1-227ENST00000615517 PTPN23Q9H3S7 1636 aa10.98□□□□□ -0.65
MUC1-227ENST00000615517 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
MUC1-227ENST00000615517 HRCP23327 699 aa10.97□□□□□ -0.65
MUC1-227ENST00000615517 GJD4Q96KN9 370 aaPredicted RBP10.97□□□□□ -0.65
MUC1-227ENST00000615517 ADGRL3Q9HAR2 1447 aa10.97□□□□□ -0.65
MUC1-227ENST00000615517 C1orf167Q5SNV9 1468 aa10.97□□□□□ -0.65
MUC1-227ENST00000615517 E9PCH4 1651 aa10.97□□□□□ -0.65
MUC1-227ENST00000615517 MYOM2P54296 1465 aa10.96□□□□□ -0.65
MUC1-227ENST00000615517 CHIC2Q9UKJ5 165 aa10.95□□□□□ -0.66
MUC1-227ENST00000615517 RALGAPBQ86X10 1494 aa10.94□□□□□ -0.66
MUC1-227ENST00000615517 METP08581 1390 aa10.94□□□□□ -0.66
MUC1-227ENST00000615517 ORAI2Q96SN7 254 aa10.94□□□□□ -0.66
MUC1-227ENST00000615517 ANKRD30AQ9BXX3 1397 aa10.93□□□□□ -0.66
MUC1-227ENST00000615517 YY1P25490 414 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms