RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 GOLGA2Q08379 1002 aa13.12□□□□□ -0.31
TNFAIP3-208ENST00000615468 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
TNFAIP3-208ENST00000615468 MFAP1P55081 439 aaKnown RBP13.12□□□□□ -0.31
TNFAIP3-208ENST00000615468 PRDM4Q9UKN5 801 aa13.12□□□□□ -0.31
TNFAIP3-208ENST00000615468 ANKRD30BQ9BXX2 1392 aa13.11□□□□□ -0.31
TNFAIP3-208ENST00000615468 C9orf84Q5VXU9 1444 aa13.11□□□□□ -0.31
TNFAIP3-208ENST00000615468 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
TNFAIP3-208ENST00000615468 MAPK8IP3Q9UPT6 1336 aa13.11□□□□□ -0.31
TNFAIP3-208ENST00000615468 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP3-208ENST00000615468 ADAMTS8Q9UP79 889 aa13.11□□□□□ -0.31
TNFAIP3-208ENST00000615468 TCOF1Q13428 1488 aaKnown RBP13.1□□□□□ -0.31
TNFAIP3-208ENST00000615468 HSCBQ8IWL3 235 aa13.1□□□□□ -0.31
TNFAIP3-208ENST00000615468 TNNT2P45379 298 aaPredicted RBP13.1□□□□□ -0.31
TNFAIP3-208ENST00000615468 COG6Q9Y2V7 657 aa13.1□□□□□ -0.31
TNFAIP3-208ENST00000615468 ARHGAP5Q13017 1502 aa13.1□□□□□ -0.31
TNFAIP3-208ENST00000615468 BCAR3O75815 825 aa13.1□□□□□ -0.31
TNFAIP3-208ENST00000615468 MAP7D2Q96T17 732 aa13.09□□□□□ -0.31
TNFAIP3-208ENST00000615468 CHD1O14646 1710 aa13.09□□□□□ -0.31
TNFAIP3-208ENST00000615468 NCLP19338 710 aaKnown RBP13.09□□□□□ -0.31
TNFAIP3-208ENST00000615468 RPRD2Q5VT52 1461 aaKnown RBP13.09□□□□□ -0.31
TNFAIP3-208ENST00000615468 CENPJQ9HC77 1338 aaPredicted RBP13.09□□□□□ -0.31
TNFAIP3-208ENST00000615468 FOXD4L1Q9NU39 408 aa13.09□□□□□ -0.31
TNFAIP3-208ENST00000615468 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP3-208ENST00000615468 ZSCAN30Q86W11 494 aa13.08□□□□□ -0.32
TNFAIP3-208ENST00000615468 NASPP49321 788 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-208ENST00000615468 CCDC146Q8IYE0 955 aa13.07□□□□□ -0.32
TNFAIP3-208ENST00000615468 UQCRHLA0A096LP55 91 aa13.07□□□□□ -0.32
TNFAIP3-208ENST00000615468 UQCRHP07919 91 aa13.07□□□□□ -0.32
TNFAIP3-208ENST00000615468 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
TNFAIP3-208ENST00000615468 PANK1Q8TE04 598 aa13.06□□□□□ -0.32
TNFAIP3-208ENST00000615468 BBXQ8WY36 941 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-208ENST00000615468 SPAG9O60271 1321 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-208ENST00000615468 GAS2L3Q86XJ1 694 aa13.06□□□□□ -0.32
TNFAIP3-208ENST00000615468 TBC1D32Q96NH3 1257 aa13.06□□□□□ -0.32
TNFAIP3-208ENST00000615468 DENND4BO75064 1496 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-208ENST00000615468 GBP4Q96PP9 640 aa13.06□□□□□ -0.32
TNFAIP3-208ENST00000615468 KIF3BO15066 747 aa13.05□□□□□ -0.32
TNFAIP3-208ENST00000615468 OFD1O75665 1012 aa13.05□□□□□ -0.32
TNFAIP3-208ENST00000615468 HSP90AB1P08238 724 aaKnown RBP13.05□□□□□ -0.32
TNFAIP3-208ENST00000615468 RIPK4P57078 832 aa13.05□□□□□ -0.32
TNFAIP3-208ENST00000615468 ISY1Q9ULR0 285 aaKnown RBP13.05□□□□□ -0.32
TNFAIP3-208ENST00000615468 ROCK1Q13464 1354 aa13.04□□□□□ -0.32
TNFAIP3-208ENST00000615468 C22orf23Q9BZE7 217 aa13.04□□□□□ -0.32
TNFAIP3-208ENST00000615468 XPCQ01831 940 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-208ENST00000615468 CCDC173Q0VFZ6 552 aa13.04□□□□□ -0.32
TNFAIP3-208ENST00000615468 CLUAP1Q96AJ1 413 aa13.04□□□□□ -0.32
TNFAIP3-208ENST00000615468 DNTTIP2Q5QJE6 756 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-208ENST00000615468 GGT6Q6P531 493 aa13.04□□□□□ -0.32
TNFAIP3-208ENST00000615468 PANK3Q9H999 370 aa13.03□□□□□ -0.32
TNFAIP3-208ENST00000615468 GOLGA6L22H0YM25 854 aa13.03□□□□□ -0.32
TNFAIP3-208ENST00000615468 TEX14Q8IWB6 1497 aa13.03□□□□□ -0.32
TNFAIP3-208ENST00000615468 ABCA8O94911 1581 aa13.03□□□□□ -0.32
TNFAIP3-208ENST00000615468 CGNL1Q0VF96 1302 aa13.01□□□□□ -0.33
TNFAIP3-208ENST00000615468 DDX49Q9Y6V7 483 aaKnown RBP13.01□□□□□ -0.33
TNFAIP3-208ENST00000615468 SMAP1Q8IYB5 467 aaPredicted RBP13.01□□□□□ -0.33
TNFAIP3-208ENST00000615468 BCL11BQ9C0K0 894 aaPredicted RBP13□□□□□ -0.33
TNFAIP3-208ENST00000615468 PDZRN3Q9UPQ7 1066 aa13□□□□□ -0.33
TNFAIP3-208ENST00000615468 NEUROD2Q15784 382 aa13□□□□□ -0.33
TNFAIP3-208ENST00000615468 SKOR2Q2VWA4 1001 aaPredicted RBP13□□□□□ -0.33
TNFAIP3-208ENST00000615468 TNPO1Q92973 898 aaKnown RBP13□□□□□ -0.33
TNFAIP3-208ENST00000615468 BCORL1Q5H9F3 1711 aa12.99□□□□□ -0.33
TNFAIP3-208ENST00000615468 APAF1O14727 1248 aa12.99□□□□□ -0.33
TNFAIP3-208ENST00000615468 PLPPR3Q6T4P5 718 aa12.99□□□□□ -0.33
TNFAIP3-208ENST00000615468 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
TNFAIP3-208ENST00000615468 SYCP2Q9BX26 1530 aa12.98□□□□□ -0.33
TNFAIP3-208ENST00000615468 KIAA1107Q9UPP5 1409 aa12.98□□□□□ -0.33
TNFAIP3-208ENST00000615468 ABCC10Q5T3U5 1492 aa12.98□□□□□ -0.33
TNFAIP3-208ENST00000615468 RSPH4AQ5TD94 716 aa12.98□□□□□ -0.33
TNFAIP3-208ENST00000615468 MTERF4Q7Z6M4 381 aaKnown RBP12.98□□□□□ -0.33
TNFAIP3-208ENST00000615468 PMFBP1Q8TBY8 1022 aa12.98□□□□□ -0.33
TNFAIP3-208ENST00000615468 PTMAP06454 111 aaKnown RBP12.98□□□□□ -0.33
TNFAIP3-208ENST00000615468 NBPF1Q3BBV0 1214 aa12.98□□□□□ -0.33
TNFAIP3-208ENST00000615468 PLEKHH1Q9ULM0 1364 aa12.98□□□□□ -0.33
TNFAIP3-208ENST00000615468 NUTM2DQ5VT03 806 aaPredicted RBP12.97□□□□□ -0.33
TNFAIP3-208ENST00000615468 BCL2L13Q9BXK5 485 aa12.97□□□□□ -0.33
TNFAIP3-208ENST00000615468 KNSTRNQ9Y448 316 aa12.97□□□□□ -0.33
TNFAIP3-208ENST00000615468 SLFN5Q08AF3 891 aa12.97□□□□□ -0.33
TNFAIP3-208ENST00000615468 PARD3Q8TEW0 1356 aa12.97□□□□□ -0.33
TNFAIP3-208ENST00000615468 PLEKHH2Q8IVE3 1493 aa12.97□□□□□ -0.33
TNFAIP3-208ENST00000615468 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
TNFAIP3-208ENST00000615468 SCAPERQ9BY12 1400 aa12.96□□□□□ -0.33
TNFAIP3-208ENST00000615468 PZPP20742 1482 aa12.96□□□□□ -0.33
TNFAIP3-208ENST00000615468 RAPGEF3O95398 923 aa12.96□□□□□ -0.33
TNFAIP3-208ENST00000615468 CBX1P83916 185 aa12.96□□□□□ -0.34
TNFAIP3-208ENST00000615468 RWDD1Q9H446 243 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP3-208ENST00000615468 TRAPPC8Q9Y2L5 1435 aa12.95□□□□□ -0.34
TNFAIP3-208ENST00000615468 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
TNFAIP3-208ENST00000615468 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
TNFAIP3-208ENST00000615468 CCDC144AA2RUR9 1427 aa12.94□□□□□ -0.34
TNFAIP3-208ENST00000615468 ABCC2Q92887 1545 aa12.94□□□□□ -0.34
TNFAIP3-208ENST00000615468 CHMP4BQ9H444 224 aaKnown RBP12.94□□□□□ -0.34
TNFAIP3-208ENST00000615468 MLECQ14165 292 aa12.93□□□□□ -0.34
TNFAIP3-208ENST00000615468 PER1O15534 1290 aaPredicted RBP12.93□□□□□ -0.34
TNFAIP3-208ENST00000615468 ITSN2Q9NZM3 1697 aa12.93□□□□□ -0.34
TNFAIP3-208ENST00000615468 DYNC1I1O14576 645 aa12.93□□□□□ -0.34
TNFAIP3-208ENST00000615468 CDK11BP21127 795 aaKnown RBP12.92□□□□□ -0.34
TNFAIP3-208ENST00000615468 PDE3AQ14432 1141 aa12.92□□□□□ -0.34
TNFAIP3-208ENST00000615468 CSPP1Q1MSJ5 1256 aa12.92□□□□□ -0.34
TNFAIP3-208ENST00000615468 CAVIN1Q6NZI2 390 aaKnown RBP12.92□□□□□ -0.34
TNFAIP3-208ENST00000615468 TTC37Q6PGP7 1564 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms