RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 CASKIN1Q8WXD9 1431 aa4.79□□□□□ -1.64
LTN1-207ENST00000614971 UACAQ9BZF9 1416 aa4.79□□□□□ -1.64
LTN1-207ENST00000614971 BCAR3O75815 825 aa4.79□□□□□ -1.64
LTN1-207ENST00000614971 RRP1P56182 461 aaKnown RBP4.79□□□□□ -1.64
LTN1-207ENST00000614971 TEFQ10587 303 aa4.79□□□□□ -1.64
LTN1-207ENST00000614971 GORABQ5T7V8 394 aa4.79□□□□□ -1.64
LTN1-207ENST00000614971 MIS18AQ9NYP9 233 aa4.79□□□□□ -1.64
LTN1-207ENST00000614971 GTF2E1P29083 439 aaPredicted RBP4.79□□□□□ -1.64
LTN1-207ENST00000614971 TAF7LQ5H9L4 462 aa4.79□□□□□ -1.64
LTN1-207ENST00000614971 HSCBQ8IWL3 235 aa4.79□□□□□ -1.64
LTN1-207ENST00000614971 STRN4Q9NRL3 753 aa4.79□□□□□ -1.64
LTN1-207ENST00000614971 ABTB2Q8N961 1025 aa4.78□□□□□ -1.64
LTN1-207ENST00000614971 GOLGA6L22H0YM25 854 aa4.78□□□□□ -1.64
LTN1-207ENST00000614971 WDR97A6NE52 1622 aa4.78□□□□□ -1.64
LTN1-207ENST00000614971 DEKP35659 375 aaKnown RBP4.78□□□□□ -1.64
LTN1-207ENST00000614971 TCP11L2Q8N4U5 519 aa4.78□□□□□ -1.64
LTN1-207ENST00000614971 DNTTIP2Q5QJE6 756 aaKnown RBP4.78□□□□□ -1.64
LTN1-207ENST00000614971 RWDD1Q9H446 243 aaPredicted RBP4.78□□□□□ -1.64
LTN1-207ENST00000614971 FKBP5Q13451 457 aaPredicted RBP4.78□□□□□ -1.64
LTN1-207ENST00000614971 ERICH6BQ5W0A0 696 aa4.78□□□□□ -1.64
LTN1-207ENST00000614971 AKNAQ7Z591 1439 aa4.78□□□□□ -1.64
LTN1-207ENST00000614971 TOMM22Q9NS69 142 aa4.78□□□□□ -1.64
LTN1-207ENST00000614971 DCTN1Q14203 1278 aa4.77□□□□□ -1.65
LTN1-207ENST00000614971 NUTM2BA6NNL0 878 aaPredicted RBP4.77□□□□□ -1.65
LTN1-207ENST00000614971 NUTM2EB1AL46 878 aaPredicted RBP4.77□□□□□ -1.65
LTN1-207ENST00000614971 KDM4AO75164 1064 aa4.77□□□□□ -1.65
LTN1-207ENST00000614971 PRKAR2BP31323 418 aa4.77□□□□□ -1.65
LTN1-207ENST00000614971 NUTM2AQ8IVF1 878 aaPredicted RBP4.77□□□□□ -1.65
LTN1-207ENST00000614971 C9orf84Q5VXU9 1444 aa4.77□□□□□ -1.65
LTN1-207ENST00000614971 ZC3H6P61129 1189 aaKnown RBP4.77□□□□□ -1.65
LTN1-207ENST00000614971 FRAT2O75474 233 aaPredicted RBP4.77□□□□□ -1.65
LTN1-207ENST00000614971 TOP2BQ02880 1626 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 MRC2Q9UBG0 1479 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 PDE4AP27815 886 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 PIP4K2BP78356 416 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 ZBED9Q6R2W3 1325 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 MS4A1P11836 297 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 C1orf141Q5JVX7 400 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 KIAA1211Q6ZU35 1233 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 KLHL34Q8N239 644 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 PPP2R1AP30153 589 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 ZRSR1Q15695 479 aaKnown RBP4.76□□□□□ -1.65
LTN1-207ENST00000614971 USHBP1Q8N6Y0 703 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 CDK19Q9BWU1 502 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 FOSBP53539 338 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 SULT6B1Q6IMI4 303 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 CHMP4CQ96CF2 233 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 TSPYL4Q9UJ04 414 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 SYNJ2O15056 1496 aa4.76□□□□□ -1.65
LTN1-207ENST00000614971 EXOSC9Q06265 439 aaKnown RBP4.75□□□□□ -1.65
LTN1-207ENST00000614971 PROSER2Q86WR7 435 aaPredicted RBP4.75□□□□□ -1.65
LTN1-207ENST00000614971 GOLGA6L4A6NEF3 574 aa4.75□□□□□ -1.65
LTN1-207ENST00000614971 ZKSCAN2Q63HK3 967 aa4.75□□□□□ -1.65
LTN1-207ENST00000614971 DDX54Q8TDD1 881 aaKnown RBP4.75□□□□□ -1.65
LTN1-207ENST00000614971 CCDC85AQ96PX6 553 aaPredicted RBP4.75□□□□□ -1.65
LTN1-207ENST00000614971 C9orf78Q9NZ63 289 aaPredicted RBP4.75□□□□□ -1.65
LTN1-207ENST00000614971 ATF3P18847 181 aa4.75□□□□□ -1.65
LTN1-207ENST00000614971 FYCO1Q9BQS8 1478 aa4.75□□□□□ -1.65
LTN1-207ENST00000614971 ADGRF5Q8IZF2 1346 aa4.75□□□□□ -1.65
LTN1-207ENST00000614971 E9PSI1 815 aa4.74□□□□□ -1.65
LTN1-207ENST00000614971 RAD21O60216 631 aa4.74□□□□□ -1.65
LTN1-207ENST00000614971 RRBP1Q9P2E9 1410 aaKnown RBP4.74□□□□□ -1.65
LTN1-207ENST00000614971 CFAP65Q6ZU64 1925 aaKnown RBP4.74□□□□□ -1.65
LTN1-207ENST00000614971 FAM161AQ3B820 660 aa4.74□□□□□ -1.65
LTN1-207ENST00000614971 URB2Q14146 1524 aaKnown RBP4.74□□□□□ -1.65
LTN1-207ENST00000614971 NAIPQ13075 1403 aa4.74□□□□□ -1.65
LTN1-207ENST00000614971 FOXO3O43524 673 aa4.74□□□□□ -1.65
LTN1-207ENST00000614971 SAMD1Q6SPF0 538 aaPredicted RBP4.74□□□□□ -1.65
LTN1-207ENST00000614971 NAP1L5Q96NT1 182 aaPredicted RBP4.74□□□□□ -1.65
LTN1-207ENST00000614971 PCF11O94913 1555 aaKnown RBP4.74□□□□□ -1.65
LTN1-207ENST00000614971 EPRSP07814 1512 aaKnown RBP4.74□□□□□ -1.65
LTN1-207ENST00000614971 TROQ12816 1431 aaPredicted RBP4.74□□□□□ -1.65
LTN1-207ENST00000614971 IDI1Q13907 227 aa4.74□□□□□ -1.65
LTN1-207ENST00000614971 C20orf194Q5TEA3 1177 aa4.74□□□□□ -1.65
LTN1-207ENST00000614971 HSP90B1P14625 803 aaKnown RBP4.74□□□□□ -1.65
LTN1-207ENST00000614971 CALD1Q05682 793 aaKnown RBP4.74□□□□□ -1.65
LTN1-207ENST00000614971 DZIP1LQ8IYY4 767 aaKnown RBP4.74□□□□□ -1.65
LTN1-207ENST00000614971 STK11IPQ8N1F8 1099 aa4.74□□□□□ -1.65
LTN1-207ENST00000614971 CLSTN1O94985 981 aa4.74□□□□□ -1.65
LTN1-207ENST00000614971 CREBRFQ8IUR6 639 aa4.74□□□□□ -1.65
LTN1-207ENST00000614971 TTC5Q8N0Z6 440 aa4.74□□□□□ -1.65
LTN1-207ENST00000614971 BCL11BQ9C0K0 894 aaPredicted RBP4.74□□□□□ -1.65
LTN1-207ENST00000614971 MTMR7Q9Y216 660 aa4.74□□□□□ -1.65
LTN1-207ENST00000614971 RUNDC1Q96C34 613 aa4.73□□□□□ -1.65
LTN1-207ENST00000614971 GNL2Q13823 731 aaKnown RBP4.73□□□□□ -1.65
LTN1-207ENST00000614971 TIAM1Q13009 1591 aa4.73□□□□□ -1.65
LTN1-207ENST00000614971 UNC13AQ9UPW8 1703 aa4.73□□□□□ -1.65
LTN1-207ENST00000614971 DAPK1P53355 1430 aa4.73□□□□□ -1.65
LTN1-207ENST00000614971 CNTLNQ9NXG0 1405 aa4.73□□□□□ -1.65
LTN1-207ENST00000614971 IPO9Q96P70 1041 aaKnown RBP4.73□□□□□ -1.65
LTN1-207ENST00000614971 MAP4K4O95819 1239 aaPredicted RBP4.73□□□□□ -1.65
LTN1-207ENST00000614971 MYL6BP14649 208 aa4.73□□□□□ -1.65
LTN1-207ENST00000614971 RAPGEF4Q8WZA2 1011 aa4.73□□□□□ -1.65
LTN1-207ENST00000614971 AEBP2Q6ZN18 517 aaPredicted RBP4.73□□□□□ -1.65
LTN1-207ENST00000614971 NME9Q86XW9 330 aa4.73□□□□□ -1.65
LTN1-207ENST00000614971 PNISRQ8TF01 805 aaKnown RBP4.73□□□□□ -1.65
LTN1-207ENST00000614971 MCM10Q7L590 875 aa4.73□□□□□ -1.65
LTN1-207ENST00000614971 NCKAP5LQ9HCH0 1330 aa4.73□□□□□ -1.65
LTN1-207ENST00000614971 ERBINQ96RT1 1412 aa4.72□□□□□ -1.65
LTN1-207ENST00000614971 PDE4CQ08493 712 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms