RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 C9orf84Q5VXU9 1444 aa18.35■□□□□ 0.53
SNPH-203ENST00000614659 G3V3G9 751 aa18.35■□□□□ 0.53
SNPH-203ENST00000614659 DCAF8Q5TAQ9 597 aa18.35■□□□□ 0.53
SNPH-203ENST00000614659 AFAP1Q8N556 730 aa18.35■□□□□ 0.53
SNPH-203ENST00000614659 TXNDC2Q86VQ3 553 aa18.35■□□□□ 0.53
SNPH-203ENST00000614659 SYAP1Q96A49 352 aaPredicted RBP18.35■□□□□ 0.53
SNPH-203ENST00000614659 GPRASP1Q5JY77 1395 aa18.34■□□□□ 0.53
SNPH-203ENST00000614659 TAF7LQ5H9L4 462 aa18.34■□□□□ 0.53
SNPH-203ENST00000614659 LTV1Q96GA3 475 aaPredicted RBP18.34■□□□□ 0.53
SNPH-203ENST00000614659 CRBNQ96SW2 442 aa18.34■□□□□ 0.53
SNPH-203ENST00000614659 GRIN2AQ12879 1464 aa18.33■□□□□ 0.53
SNPH-203ENST00000614659 GTF2E1P29083 439 aaPredicted RBP18.33■□□□□ 0.53
SNPH-203ENST00000614659 ANKLE2Q86XL3 938 aa18.33■□□□□ 0.53
SNPH-203ENST00000614659 MFAP1P55081 439 aaKnown RBP18.32■□□□□ 0.52
SNPH-203ENST00000614659 GPATCH3Q96I76 525 aa18.32■□□□□ 0.52
SNPH-203ENST00000614659 PROSER2Q86WR7 435 aaPredicted RBP18.31■□□□□ 0.52
SNPH-203ENST00000614659 HTATSF1O43719 755 aaKnown RBP18.31■□□□□ 0.52
SNPH-203ENST00000614659 HMGB2P26583 209 aaKnown RBP18.31■□□□□ 0.52
SNPH-203ENST00000614659 EPRSP07814 1512 aaKnown RBP18.31■□□□□ 0.52
SNPH-203ENST00000614659 RUNDC1Q96C34 613 aa18.3■□□□□ 0.52
SNPH-203ENST00000614659 GOLGA6L3A6NEY3 463 aa18.3■□□□□ 0.52
SNPH-203ENST00000614659 DDX11L8A8MPP1 907 aa18.3■□□□□ 0.52
SNPH-203ENST00000614659 CD109Q6YHK3 1445 aa18.3■□□□□ 0.52
SNPH-203ENST00000614659 TTC5Q8N0Z6 440 aa18.29■□□□□ 0.52
SNPH-203ENST00000614659 NAIPQ13075 1403 aa18.29■□□□□ 0.52
SNPH-203ENST00000614659 DDX19BQ9UMR2 479 aa18.29■□□□□ 0.52
SNPH-203ENST00000614659 SPRYD3Q8NCJ5 442 aa18.28■□□□□ 0.52
SNPH-203ENST00000614659 SLKQ9H2G2 1235 aaPredicted RBP18.28■□□□□ 0.52
SNPH-203ENST00000614659 TEFQ10587 303 aa18.28■□□□□ 0.52
SNPH-203ENST00000614659 CSPP1Q1MSJ5 1256 aa18.28■□□□□ 0.52
SNPH-203ENST00000614659 GORABQ5T7V8 394 aa18.28■□□□□ 0.52
SNPH-203ENST00000614659 RPGRIP1LQ68CZ1 1315 aa18.27■□□□□ 0.52
SNPH-203ENST00000614659 WDR97A6NE52 1622 aa18.27■□□□□ 0.52
SNPH-203ENST00000614659 CLUAP1Q96AJ1 413 aa18.27■□□□□ 0.51
SNPH-203ENST00000614659 APAF1O14727 1248 aa18.26■□□□□ 0.51
SNPH-203ENST00000614659 PTPN23Q9H3S7 1636 aa18.26■□□□□ 0.51
SNPH-203ENST00000614659 DCAF8L1A6NGE4 600 aa18.26■□□□□ 0.51
SNPH-203ENST00000614659 ST18O60284 1047 aa18.25■□□□□ 0.51
SNPH-203ENST00000614659 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
SNPH-203ENST00000614659 DIAPH1O60610 1272 aaKnown RBP18.23■□□□□ 0.51
SNPH-203ENST00000614659 SMG6Q86US8 1419 aaKnown RBP18.23■□□□□ 0.51
SNPH-203ENST00000614659 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.23■□□□□ 0.51
SNPH-203ENST00000614659 RAPGEF4Q8WZA2 1011 aa18.23■□□□□ 0.51
SNPH-203ENST00000614659 THOC2Q8NI27 1593 aaKnown RBP18.23■□□□□ 0.51
SNPH-203ENST00000614659 PLIN1O60240 522 aa18.22■□□□□ 0.51
SNPH-203ENST00000614659 SKOR2Q2VWA4 1001 aaPredicted RBP18.22■□□□□ 0.51
SNPH-203ENST00000614659 PLB1Q6P1J6 1458 aa18.22■□□□□ 0.51
SNPH-203ENST00000614659 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
SNPH-203ENST00000614659 RRP7AQ9Y3A4 280 aaKnown RBP18.22■□□□□ 0.51
SNPH-203ENST00000614659 KIF16BQ96L93 1317 aa18.22■□□□□ 0.51
SNPH-203ENST00000614659 NINLQ9Y2I6 1382 aa18.22■□□□□ 0.51
SNPH-203ENST00000614659 API5Q9BZZ5 524 aaKnown RBP18.22■□□□□ 0.51
SNPH-203ENST00000614659 CHMP3Q9Y3E7 222 aa18.21■□□□□ 0.51
SNPH-203ENST00000614659 APBB1O00213 710 aa18.21■□□□□ 0.51
SNPH-203ENST00000614659 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
SNPH-203ENST00000614659 URB2Q14146 1524 aaKnown RBP18.2■□□□□ 0.5
SNPH-203ENST00000614659 AKNAQ7Z591 1439 aa18.2■□□□□ 0.5
SNPH-203ENST00000614659 MSH5O43196 834 aa18.19■□□□□ 0.5
SNPH-203ENST00000614659 PHF14O94880 888 aa18.19■□□□□ 0.5
SNPH-203ENST00000614659 TEX14Q8IWB6 1497 aa18.19■□□□□ 0.5
SNPH-203ENST00000614659 ISY1Q9ULR0 285 aaKnown RBP18.19■□□□□ 0.5
SNPH-203ENST00000614659 NAP1L2Q9ULW6 460 aaPredicted RBP18.19■□□□□ 0.5
SNPH-203ENST00000614659 COG6Q9Y2V7 657 aa18.18■□□□□ 0.5
SNPH-203ENST00000614659 KIAA2012Q0VF49 1180 aa18.18■□□□□ 0.5
SNPH-203ENST00000614659 NEXNQ0ZGT2 675 aa18.18■□□□□ 0.5
SNPH-203ENST00000614659 KIF14Q15058 1648 aa18.17■□□□□ 0.5
SNPH-203ENST00000614659 RAPGEF3O95398 923 aa18.17■□□□□ 0.5
SNPH-203ENST00000614659 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
SNPH-203ENST00000614659 NBPF8Q3BBV2 869 aa18.16■□□□□ 0.5
SNPH-203ENST00000614659 TRIM6-TRIM34B2RNG4 842 aa18.16■□□□□ 0.5
SNPH-203ENST00000614659 ERBINQ96RT1 1412 aa18.16■□□□□ 0.5
SNPH-203ENST00000614659 DRC7Q8IY82 874 aa18.16■□□□□ 0.5
SNPH-203ENST00000614659 CDK13Q14004 1512 aaKnown RBP18.15■□□□□ 0.5
SNPH-203ENST00000614659 CHMP4CQ96CF2 233 aa18.15■□□□□ 0.5
SNPH-203ENST00000614659 CCDC141Q6ZP82 1450 aa18.15■□□□□ 0.5
SNPH-203ENST00000614659 GNAI1P63096 354 aa18.15■□□□□ 0.5
SNPH-203ENST00000614659 DDX58O95786 925 aaKnown RBP18.15■□□□□ 0.5
SNPH-203ENST00000614659 PPP2R1AP30153 589 aa18.15■□□□□ 0.5
SNPH-203ENST00000614659 SF3B2Q13435 895 aaKnown RBP18.15■□□□□ 0.5
SNPH-203ENST00000614659 GSE1Q14687 1217 aa18.15■□□□□ 0.5
SNPH-203ENST00000614659 ESCO1Q5FWF5 840 aa18.14■□□□□ 0.49
SNPH-203ENST00000614659 ADGRL1O94910 1474 aa18.14■□□□□ 0.49
SNPH-203ENST00000614659 CAMSAP2Q08AD1 1489 aa18.14■□□□□ 0.49
SNPH-203ENST00000614659 ANKRD30BQ9BXX2 1392 aa18.14■□□□□ 0.49
SNPH-203ENST00000614659 SLC4A10Q6U841 1118 aa18.14■□□□□ 0.49
SNPH-203ENST00000614659 ZNF692Q9BU19 519 aaPredicted RBP18.14■□□□□ 0.49
SNPH-203ENST00000614659 DENND4BO75064 1496 aaPredicted RBP18.13■□□□□ 0.49
SNPH-203ENST00000614659 RIPK4P57078 832 aa18.13■□□□□ 0.49
SNPH-203ENST00000614659 ANKRD45Q5TZF3 282 aa18.13■□□□□ 0.49
SNPH-203ENST00000614659 FRAT2O75474 233 aaPredicted RBP18.13■□□□□ 0.49
SNPH-203ENST00000614659 GZF1Q9H116 711 aaPredicted RBP18.12■□□□□ 0.49
SNPH-203ENST00000614659 LRRFIP1Q32MZ4 808 aaKnown RBP18.11■□□□□ 0.49
SNPH-203ENST00000614659 KIF3AQ9Y496 699 aa18.11■□□□□ 0.49
SNPH-203ENST00000614659 REC8O95072 547 aa18.11■□□□□ 0.49
SNPH-203ENST00000614659 NLRP6P59044 892 aa18.11■□□□□ 0.49
SNPH-203ENST00000614659 PNISRQ8TF01 805 aaKnown RBP18.11■□□□□ 0.49
SNPH-203ENST00000614659 HSP90B1P14625 803 aaKnown RBP18.11■□□□□ 0.49
SNPH-203ENST00000614659 ADAMTS8Q9UP79 889 aa18.11■□□□□ 0.49
SNPH-203ENST00000614659 NLRP2Q9NX02 1062 aa18.1■□□□□ 0.49
SNPH-203ENST00000614659 CT47B1P0C2W7 299 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms