RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 PLEKHH1Q9ULM0 1364 aa17.73■□□□□ 0.43
HPS1-215ENST00000613394 ADGRL2O95490 1459 aa17.73■□□□□ 0.43
HPS1-215ENST00000613394 MBD5Q9P267 1494 aa17.73■□□□□ 0.43
HPS1-215ENST00000613394 SPINK5Q9NQ38 1064 aaPredicted RBP17.72■□□□□ 0.43
HPS1-215ENST00000613394 SLFN5Q08AF3 891 aa17.72■□□□□ 0.43
HPS1-215ENST00000613394 ITSN2Q9NZM3 1697 aa17.72■□□□□ 0.43
HPS1-215ENST00000613394 FAM135AQ9P2D6 1515 aa17.72■□□□□ 0.43
HPS1-215ENST00000613394 SLC12A5Q9H2X9 1139 aa17.7■□□□□ 0.42
HPS1-215ENST00000613394 GZF1Q9H116 711 aaPredicted RBP17.7■□□□□ 0.42
HPS1-215ENST00000613394 AMER1Q5JTC6 1135 aaPredicted RBP17.7■□□□□ 0.42
HPS1-215ENST00000613394 EIF3AQ14152 1382 aaKnown RBP17.69■□□□□ 0.42
HPS1-215ENST00000613394 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
HPS1-215ENST00000613394 HSP90AA1P07900 732 aaKnown RBP17.67■□□□□ 0.42
HPS1-215ENST00000613394 SRPK2P78362 688 aaKnown RBP17.67■□□□□ 0.42
HPS1-215ENST00000613394 A2MP01023 1474 aa17.67■□□□□ 0.42
HPS1-215ENST00000613394 ARHGEF12Q9NZN5 1544 aa17.66■□□□□ 0.42
HPS1-215ENST00000613394 TCP11L2Q8N4U5 519 aa17.66■□□□□ 0.42
HPS1-215ENST00000613394 STAG3Q9UJ98 1225 aa17.66■□□□□ 0.42
HPS1-215ENST00000613394 SYCP2Q9BX26 1530 aa17.66■□□□□ 0.42
HPS1-215ENST00000613394 IGHDP01880 384 aa17.66■□□□□ 0.42
HPS1-215ENST00000613394 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
HPS1-215ENST00000613394 MFAP1P55081 439 aaKnown RBP17.65■□□□□ 0.42
HPS1-215ENST00000613394 CEP170Q5SW79 1584 aa17.65■□□□□ 0.42
HPS1-215ENST00000613394 MTHFSP49914 203 aa17.64■□□□□ 0.42
HPS1-215ENST00000613394 CGNL1Q0VF96 1302 aa17.64■□□□□ 0.42
HPS1-215ENST00000613394 ITPRIPQ8IWB1 547 aa17.64■□□□□ 0.41
HPS1-215ENST00000613394 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
HPS1-215ENST00000613394 ADGRF5Q8IZF2 1346 aa17.63■□□□□ 0.41
HPS1-215ENST00000613394 SMC4Q9NTJ3 1288 aa17.63■□□□□ 0.41
HPS1-215ENST00000613394 C8orf34Q49A92 452 aa17.61■□□□□ 0.41
HPS1-215ENST00000613394 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
HPS1-215ENST00000613394 TNNQ9UQP3 1299 aa17.61■□□□□ 0.41
HPS1-215ENST00000613394 COL17A1Q9UMD9 1497 aaPredicted RBP17.61■□□□□ 0.41
HPS1-215ENST00000613394 RWDD1Q9H446 243 aaPredicted RBP17.6■□□□□ 0.41
HPS1-215ENST00000613394 ADGBQ8N7X0 1667 aa17.6■□□□□ 0.41
HPS1-215ENST00000613394 POGKQ9P215 609 aa17.6■□□□□ 0.41
HPS1-215ENST00000613394 ABCC10Q5T3U5 1492 aa17.6■□□□□ 0.41
HPS1-215ENST00000613394 PMFBP1Q8TBY8 1022 aa17.59■□□□□ 0.41
HPS1-215ENST00000613394 TSR2Q969E8 191 aaKnown RBP17.59■□□□□ 0.41
HPS1-215ENST00000613394 SHANK2Q9UPX8 1470 aa17.59■□□□□ 0.41
HPS1-215ENST00000613394 SLC24A1O60721 1099 aa17.58■□□□□ 0.41
HPS1-215ENST00000613394 RUNDC1Q96C34 613 aa17.58■□□□□ 0.41
HPS1-215ENST00000613394 SCAPERQ9BY12 1400 aa17.58■□□□□ 0.41
HPS1-215ENST00000613394 CABP2Q9NPB3 220 aa17.58■□□□□ 0.4
HPS1-215ENST00000613394 CARD14Q9BXL6 1004 aa17.57■□□□□ 0.4
HPS1-215ENST00000613394 MYH16Q9H6N6 1097 aa17.57■□□□□ 0.4
HPS1-215ENST00000613394 SEC24BO95487 1268 aa17.57■□□□□ 0.4
HPS1-215ENST00000613394 GGNBP2Q9H3C7 697 aa17.57■□□□□ 0.4
HPS1-215ENST00000613394 PDZRN3Q9UPQ7 1066 aa17.57■□□□□ 0.4
HPS1-215ENST00000613394 PLA2R1Q13018 1463 aa17.57■□□□□ 0.4
HPS1-215ENST00000613394 ELL2O00472 640 aaPredicted RBP17.56■□□□□ 0.4
HPS1-215ENST00000613394 KDM2BQ8NHM5 1336 aa17.56■□□□□ 0.4
HPS1-215ENST00000613394 NUP160Q12769 1436 aa17.55■□□□□ 0.4
HPS1-215ENST00000613394 FOXD4L1Q9NU39 408 aa17.55■□□□□ 0.4
HPS1-215ENST00000613394 TRAPPC8Q9Y2L5 1435 aa17.54■□□□□ 0.4
HPS1-215ENST00000613394 MAGI2Q86UL8 1455 aa17.54■□□□□ 0.4
HPS1-215ENST00000613394 PDE3AQ14432 1141 aa17.54■□□□□ 0.4
HPS1-215ENST00000613394 GPRASP1Q5JY77 1395 aa17.53■□□□□ 0.4
HPS1-215ENST00000613394 BLMP54132 1417 aaPredicted RBP17.52■□□□□ 0.4
HPS1-215ENST00000613394 MINK1Q8N4C8 1332 aaPredicted RBP17.52■□□□□ 0.4
HPS1-215ENST00000613394 ZKSCAN2Q63HK3 967 aa17.52■□□□□ 0.4
HPS1-215ENST00000613394 NKTRP30414 1462 aaKnown RBP17.52■□□□□ 0.39
HPS1-215ENST00000613394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.51■□□□□ 0.39
HPS1-215ENST00000613394 RARSP54136 660 aaKnown RBP17.5■□□□□ 0.39
HPS1-215ENST00000613394 DZIP1LQ8IYY4 767 aaKnown RBP17.5■□□□□ 0.39
HPS1-215ENST00000613394 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
HPS1-215ENST00000613394 RLBP1P12271 317 aa17.5■□□□□ 0.39
HPS1-215ENST00000613394 PCDHB15Q9Y5E8 787 aa17.5■□□□□ 0.39
HPS1-215ENST00000613394 NSD3Q9BZ95 1437 aa17.5■□□□□ 0.39
HPS1-215ENST00000613394 EXOSC9Q06265 439 aaKnown RBP17.5■□□□□ 0.39
HPS1-215ENST00000613394 CDC42BPAQ5VT25 1732 aa17.49■□□□□ 0.39
HPS1-215ENST00000613394 KDM5DQ9BY66 1539 aa17.49■□□□□ 0.39
HPS1-215ENST00000613394 APBB1O00213 710 aa17.48■□□□□ 0.39
HPS1-215ENST00000613394 HSCBQ8IWL3 235 aa17.48■□□□□ 0.39
HPS1-215ENST00000613394 ZMYM4Q5VZL5 1548 aa17.48■□□□□ 0.39
HPS1-215ENST00000613394 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
HPS1-215ENST00000613394 HSP90AB1P08238 724 aaKnown RBP17.47■□□□□ 0.39
HPS1-215ENST00000613394 LNPKQ9C0E8 428 aa17.47■□□□□ 0.39
HPS1-215ENST00000613394 SAMD9LQ8IVG5 1584 aa17.47■□□□□ 0.39
HPS1-215ENST00000613394 STAC3Q96MF2 364 aa17.46■□□□□ 0.39
HPS1-215ENST00000613394 SOX12O15370 315 aa17.46■□□□□ 0.39
HPS1-215ENST00000613394 RIPK4P57078 832 aa17.46■□□□□ 0.39
HPS1-215ENST00000613394 ASXL1Q8IXJ9 1541 aa17.45■□□□□ 0.38
HPS1-215ENST00000613394 POLR1AO95602 1720 aaPredicted RBP17.45■□□□□ 0.38
HPS1-215ENST00000613394 EVC2Q86UK5 1308 aa17.45■□□□□ 0.38
HPS1-215ENST00000613394 ABCA8O94911 1581 aa17.45■□□□□ 0.38
HPS1-215ENST00000613394 MLECQ14165 292 aa17.43■□□□□ 0.38
HPS1-215ENST00000613394 NGEFQ8N5V2 710 aa17.43■□□□□ 0.38
HPS1-215ENST00000613394 C22orf23Q9BZE7 217 aa17.43■□□□□ 0.38
HPS1-215ENST00000613394 ZNF521Q96K83 1311 aa17.42■□□□□ 0.38
HPS1-215ENST00000613394 WDR7Q9Y4E6 1490 aa17.42■□□□□ 0.38
HPS1-215ENST00000613394 HMOX1P09601 288 aa17.42■□□□□ 0.38
HPS1-215ENST00000613394 NCLP19338 710 aaKnown RBP17.42■□□□□ 0.38
HPS1-215ENST00000613394 NAP1L5Q96NT1 182 aaPredicted RBP17.42■□□□□ 0.38
HPS1-215ENST00000613394 DUOX2Q9NRD8 1548 aa17.41■□□□□ 0.38
HPS1-215ENST00000613394 FBLN1P23142 703 aa17.41■□□□□ 0.38
HPS1-215ENST00000613394 ANKRD45Q5TZF3 282 aa17.41■□□□□ 0.38
HPS1-215ENST00000613394 C1orf115Q9H7X2 142 aa17.41■□□□□ 0.38
HPS1-215ENST00000613394 NOB1Q9ULX3 412 aaKnown RBP17.41■□□□□ 0.38
HPS1-215ENST00000613394 PLCH2O75038 1416 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms