RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 SGIP1Q9BQI5 828 aa8.4□□□□□ -1.06
HDDC2-205ENST00000608456 PBRM1Q86U86 1689 aa8.4□□□□□ -1.07
HDDC2-205ENST00000608456 CEP170Q5SW79 1584 aa8.39□□□□□ -1.07
HDDC2-205ENST00000608456 DISP1Q96F81 1524 aa8.39□□□□□ -1.07
HDDC2-205ENST00000608456 PRKAR2AP13861 404 aaKnown RBP8.39□□□□□ -1.07
HDDC2-205ENST00000608456 CHADLQ6NUI6 762 aa8.39□□□□□ -1.07
HDDC2-205ENST00000608456 DAXXQ9UER7 740 aaPredicted RBP8.39□□□□□ -1.07
HDDC2-205ENST00000608456 ARHGEF5Q12774 1597 aa8.39□□□□□ -1.07
HDDC2-205ENST00000608456 IFT140Q96RY7 1462 aa8.38□□□□□ -1.07
HDDC2-205ENST00000608456 CCDC144AA2RUR9 1427 aa8.38□□□□□ -1.07
HDDC2-205ENST00000608456 NPC1L1Q9UHC9 1359 aa8.38□□□□□ -1.07
HDDC2-205ENST00000608456 TSPY4P0CV99 314 aa8.38□□□□□ -1.07
HDDC2-205ENST00000608456 TSPY10P0CW01 314 aa8.38□□□□□ -1.07
HDDC2-205ENST00000608456 FAM161AQ3B820 660 aa8.38□□□□□ -1.07
HDDC2-205ENST00000608456 ATP10AO60312 1499 aa8.38□□□□□ -1.07
HDDC2-205ENST00000608456 KDM2BQ8NHM5 1336 aa8.37□□□□□ -1.07
HDDC2-205ENST00000608456 ST20-MTHFSA0A0A6YYL1 179 aa8.37□□□□□ -1.07
HDDC2-205ENST00000608456 VGFO15240 615 aaPredicted RBP8.37□□□□□ -1.07
HDDC2-205ENST00000608456 CDCA8Q53HL2 280 aa8.37□□□□□ -1.07
HDDC2-205ENST00000608456 NUP155O75694 1391 aa8.36□□□□□ -1.07
HDDC2-205ENST00000608456 NINLQ9Y2I6 1382 aa8.36□□□□□ -1.07
HDDC2-205ENST00000608456 CLASP1Q7Z460 1538 aa8.36□□□□□ -1.07
HDDC2-205ENST00000608456 CHGAP10645 457 aaKnown RBP8.36□□□□□ -1.07
HDDC2-205ENST00000608456 PRKCSHP14314 528 aaPredicted RBP8.36□□□□□ -1.07
HDDC2-205ENST00000608456 RSPH6AQ9H0K4 717 aa8.36□□□□□ -1.07
HDDC2-205ENST00000608456 CARMIL2Q6F5E8 1435 aa8.36□□□□□ -1.07
HDDC2-205ENST00000608456 PRAG1Q86YV5 1406 aa8.36□□□□□ -1.07
HDDC2-205ENST00000608456 FAM43AQ8N2R8 423 aa8.35□□□□□ -1.07
HDDC2-205ENST00000608456 EIF2AK4Q9P2K8 1649 aaKnown RBP8.35□□□□□ -1.07
HDDC2-205ENST00000608456 EIF4G3O43432 1585 aaKnown RBP8.35□□□□□ -1.07
HDDC2-205ENST00000608456 COL17A1Q9UMD9 1497 aaPredicted RBP8.34□□□□□ -1.07
HDDC2-205ENST00000608456 PLEKHD1A6NEE1 506 aa8.34□□□□□ -1.07
HDDC2-205ENST00000608456 NFKBIBQ15653 356 aa8.34□□□□□ -1.07
HDDC2-205ENST00000608456 PIP4P2Q8N4L2 257 aa8.34□□□□□ -1.07
HDDC2-205ENST00000608456 C9orf84Q5VXU9 1444 aa8.34□□□□□ -1.07
HDDC2-205ENST00000608456 ZNF644Q9H582 1327 aaPredicted RBP8.33□□□□□ -1.08
HDDC2-205ENST00000608456 ABCC10Q5T3U5 1492 aa8.33□□□□□ -1.08
HDDC2-205ENST00000608456 MRC2Q9UBG0 1479 aa8.33□□□□□ -1.08
HDDC2-205ENST00000608456 TMF1P82094 1093 aa8.33□□□□□ -1.08
HDDC2-205ENST00000608456 TRMT2AQ8IZ69 625 aaKnown RBP8.33□□□□□ -1.08
HDDC2-205ENST00000608456 TRPM1Q7Z4N2 1603 aa8.32□□□□□ -1.08
HDDC2-205ENST00000608456 SYNJ2O15056 1496 aa8.32□□□□□ -1.08
HDDC2-205ENST00000608456 ZNF521Q96K83 1311 aa8.32□□□□□ -1.08
HDDC2-205ENST00000608456 L1TD1Q5T7N2 865 aaKnown RBP8.32□□□□□ -1.08
HDDC2-205ENST00000608456 SPRYD3Q8NCJ5 442 aa8.32□□□□□ -1.08
HDDC2-205ENST00000608456 PRDM15P57071 1507 aaPredicted RBP8.32□□□□□ -1.08
HDDC2-205ENST00000608456 GRIN2AQ12879 1464 aa8.32□□□□□ -1.08
HDDC2-205ENST00000608456 CCDC141Q6ZP82 1450 aa8.32□□□□□ -1.08
HDDC2-205ENST00000608456 MAGI1Q96QZ7 1491 aaPredicted RBP8.32□□□□□ -1.08
HDDC2-205ENST00000608456 MAPK8IP3Q9UPT6 1336 aa8.31□□□□□ -1.08
HDDC2-205ENST00000608456 MAST1Q9Y2H9 1570 aa8.31□□□□□ -1.08
HDDC2-205ENST00000608456 PIK3C2GO75747 1445 aa8.31□□□□□ -1.08
HDDC2-205ENST00000608456 PRG4Q92954 1404 aaPredicted RBP8.31□□□□□ -1.08
HDDC2-205ENST00000608456 ZNF608Q9ULD9 1512 aaPredicted RBP8.31□□□□□ -1.08
HDDC2-205ENST00000608456 GOLGA2Q08379 1002 aa8.31□□□□□ -1.08
HDDC2-205ENST00000608456 PDE3AQ14432 1141 aa8.31□□□□□ -1.08
HDDC2-205ENST00000608456 BECN1Q14457 450 aa8.31□□□□□ -1.08
HDDC2-205ENST00000608456 ZNF467Q7Z7K2 595 aaPredicted RBP8.31□□□□□ -1.08
HDDC2-205ENST00000608456 DCAF11Q8TEB1 546 aa8.31□□□□□ -1.08
HDDC2-205ENST00000608456 UBE2Q2Q8WVN8 375 aa8.31□□□□□ -1.08
HDDC2-205ENST00000608456 TESK2Q96S53 571 aa8.31□□□□□ -1.08
HDDC2-205ENST00000608456 CCDC61Q9Y6R9 512 aa8.31□□□□□ -1.08
HDDC2-205ENST00000608456 PYGBP11216 843 aa8.3□□□□□ -1.08
HDDC2-205ENST00000608456 PAXIP1Q6ZW49 1069 aaPredicted RBP8.3□□□□□ -1.08
HDDC2-205ENST00000608456 NPM2Q86SE8 214 aaKnown RBP8.3□□□□□ -1.08
HDDC2-205ENST00000608456 CRBNQ96SW2 442 aa8.3□□□□□ -1.08
HDDC2-205ENST00000608456 ISY1Q9ULR0 285 aaKnown RBP8.3□□□□□ -1.08
HDDC2-205ENST00000608456 CGNL1Q0VF96 1302 aa8.29□□□□□ -1.08
HDDC2-205ENST00000608456 ERBINQ96RT1 1412 aa8.29□□□□□ -1.08
HDDC2-205ENST00000608456 DUSP27Q5VZP5 1158 aa8.29□□□□□ -1.08
HDDC2-205ENST00000608456 TSPYL2Q9H2G4 693 aaPredicted RBP8.29□□□□□ -1.08
HDDC2-205ENST00000608456 FAM135AQ9P2D6 1515 aa8.29□□□□□ -1.08
HDDC2-205ENST00000608456 ABCA8O94911 1581 aa8.28□□□□□ -1.08
HDDC2-205ENST00000608456 SLFN5Q08AF3 891 aa8.28□□□□□ -1.08
HDDC2-205ENST00000608456 C8orf34Q49A92 452 aa8.28□□□□□ -1.08
HDDC2-205ENST00000608456 IL27Q8NEV9 243 aa8.28□□□□□ -1.08
HDDC2-205ENST00000608456 POLR3GLQ9BT43 218 aa8.28□□□□□ -1.08
HDDC2-205ENST00000608456 ANO8Q9HCE9 1232 aaPredicted RBP8.28□□□□□ -1.08
HDDC2-205ENST00000608456 LAS1LQ9Y4W2 734 aaKnown RBP8.28□□□□□ -1.08
HDDC2-205ENST00000608456 SCAPERQ9BY12 1400 aa8.28□□□□□ -1.08
HDDC2-205ENST00000608456 UNC13BO14795 1591 aa8.27□□□□□ -1.09
HDDC2-205ENST00000608456 NEURL4Q96JN8 1562 aa8.27□□□□□ -1.09
HDDC2-205ENST00000608456 CDC42BPAQ5VT25 1732 aa8.27□□□□□ -1.09
HDDC2-205ENST00000608456 E9PSI1 815 aa8.27□□□□□ -1.09
HDDC2-205ENST00000608456 ZNF326Q5BKZ1 582 aaKnown RBP8.27□□□□□ -1.09
HDDC2-205ENST00000608456 PANK3Q9H999 370 aa8.27□□□□□ -1.09
HDDC2-205ENST00000608456 SALL2Q9Y467 1007 aaPredicted RBP8.27□□□□□ -1.09
HDDC2-205ENST00000608456 ABCC2Q92887 1545 aa8.27□□□□□ -1.09
HDDC2-205ENST00000608456 STK25O00506 426 aa8.26□□□□□ -1.09
HDDC2-205ENST00000608456 WDR43Q15061 677 aaKnown RBP eCLIP8.26□□□□□ -1.09
HDDC2-205ENST00000608456 ZNF579Q8NAF0 562 aaKnown RBP8.26□□□□□ -1.09
HDDC2-205ENST00000608456 FRAT1Q92837 279 aaPredicted RBP8.26□□□□□ -1.09
HDDC2-205ENST00000608456 CDCA7LQ96GN5 454 aa8.26□□□□□ -1.09
HDDC2-205ENST00000608456 KNSTRNQ9Y448 316 aa8.26□□□□□ -1.09
HDDC2-205ENST00000608456 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.25□□□□□ -1.09
HDDC2-205ENST00000608456 PMFBP1Q8TBY8 1022 aa8.25□□□□□ -1.09
HDDC2-205ENST00000608456 ZFP91Q96JP5 570 aaPredicted RBP8.25□□□□□ -1.09
HDDC2-205ENST00000608456 CFAP44Q96MT7 982 aa8.25□□□□□ -1.09
HDDC2-205ENST00000608456 RYDENQ9NUL5 291 aaKnown RBP8.25□□□□□ -1.09
HDDC2-205ENST00000608456 ATP10BO94823 1461 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms