RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 LRPPRCP42704 1394 aaKnown RBP6.91□□□□□ -1.3
SCARNA15-201ENST00000607520 C19orf44Q9H6X5 657 aa6.91□□□□□ -1.3
SCARNA15-201ENST00000607520 TBX22Q9Y458 520 aa6.91□□□□□ -1.3
SCARNA15-201ENST00000607520 KCNA6P17658 529 aa6.91□□□□□ -1.3
SCARNA15-201ENST00000607520 RBM33Q96EV2 1170 aaKnown RBP6.91□□□□□ -1.3
SCARNA15-201ENST00000607520 TNNT2P45379 298 aaPredicted RBP6.91□□□□□ -1.3
SCARNA15-201ENST00000607520 MORC1Q86VD1 984 aa6.91□□□□□ -1.3
SCARNA15-201ENST00000607520 DCAF8L1A6NGE4 600 aa6.9□□□□□ -1.3
SCARNA15-201ENST00000607520 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCARNA15-201ENST00000607520 ARXQ96QS3 562 aa6.9□□□□□ -1.3
SCARNA15-201ENST00000607520 COG3Q96JB2 828 aa6.9□□□□□ -1.31
SCARNA15-201ENST00000607520 RIMS2Q9UQ26 1411 aa6.9□□□□□ -1.31
SCARNA15-201ENST00000607520 NPHP1O15259 732 aa6.9□□□□□ -1.31
SCARNA15-201ENST00000607520 PMFBP1Q8TBY8 1022 aa6.9□□□□□ -1.31
SCARNA15-201ENST00000607520 NLRP6P59044 892 aa6.89□□□□□ -1.31
SCARNA15-201ENST00000607520 NLRP13Q86W25 1043 aa6.89□□□□□ -1.31
SCARNA15-201ENST00000607520 ABTB2Q8N961 1025 aa6.89□□□□□ -1.31
SCARNA15-201ENST00000607520 CERKQ8TCT0 537 aa6.89□□□□□ -1.31
SCARNA15-201ENST00000607520 SHANK2Q9UPX8 1470 aa6.89□□□□□ -1.31
SCARNA15-201ENST00000607520 KDM4FA0A1W2PPD8 638 aa6.89□□□□□ -1.31
SCARNA15-201ENST00000607520 ADAMTS2O95450 1211 aa6.89□□□□□ -1.31
SCARNA15-201ENST00000607520 PRDM11Q9NQV5 511 aa6.89□□□□□ -1.31
SCARNA15-201ENST00000607520 LTV1Q96GA3 475 aaPredicted RBP6.88□□□□□ -1.31
SCARNA15-201ENST00000607520 PNNQ9H307 717 aaKnown RBP6.88□□□□□ -1.31
SCARNA15-201ENST00000607520 TTC37Q6PGP7 1564 aa6.88□□□□□ -1.31
SCARNA15-201ENST00000607520 HECW2Q9P2P5 1572 aa6.88□□□□□ -1.31
SCARNA15-201ENST00000607520 NAIPQ13075 1403 aa6.88□□□□□ -1.31
SCARNA15-201ENST00000607520 ABCA9Q8IUA7 1624 aa6.88□□□□□ -1.31
SCARNA15-201ENST00000607520 PHF8Q9UPP1 1060 aa6.88□□□□□ -1.31
SCARNA15-201ENST00000607520 U2SURPO15042 1029 aaKnown RBP6.87□□□□□ -1.31
SCARNA15-201ENST00000607520 FOXO3O43524 673 aa6.87□□□□□ -1.31
SCARNA15-201ENST00000607520 DDX10Q13206 875 aaKnown RBP6.87□□□□□ -1.31
SCARNA15-201ENST00000607520 LRRC59Q96AG4 307 aaKnown RBP6.87□□□□□ -1.31
SCARNA15-201ENST00000607520 MIER1Q8N108 512 aa6.87□□□□□ -1.31
SCARNA15-201ENST00000607520 ZNF692Q9BU19 519 aaPredicted RBP6.87□□□□□ -1.31
SCARNA15-201ENST00000607520 NPHP3Q7Z494 1330 aa6.87□□□□□ -1.31
SCARNA15-201ENST00000607520 ABCC1P33527 1531 aa6.87□□□□□ -1.31
SCARNA15-201ENST00000607520 MAPK8IP3Q9UPT6 1336 aa6.86□□□□□ -1.31
SCARNA15-201ENST00000607520 STRN4Q9NRL3 753 aa6.86□□□□□ -1.31
SCARNA15-201ENST00000607520 XPCQ01831 940 aaPredicted RBP6.86□□□□□ -1.31
SCARNA15-201ENST00000607520 NUTM2GQ5VZR2 741 aa6.86□□□□□ -1.31
SCARNA15-201ENST00000607520 RNF216Q9NWF9 866 aaPredicted RBP6.86□□□□□ -1.31
SCARNA15-201ENST00000607520 CCDC61Q9Y6R9 512 aa6.86□□□□□ -1.31
SCARNA15-201ENST00000607520 TMEM2Q9UHN6 1383 aa6.86□□□□□ -1.31
SCARNA15-201ENST00000607520 PTPRMP28827 1452 aa6.85□□□□□ -1.31
SCARNA15-201ENST00000607520 WAPLQ7Z5K2 1190 aa6.85□□□□□ -1.31
SCARNA15-201ENST00000607520 CDK19Q9BWU1 502 aa6.85□□□□□ -1.31
SCARNA15-201ENST00000607520 NPHP4O75161 1426 aaPredicted RBP6.85□□□□□ -1.31
SCARNA15-201ENST00000607520 NLRP1Q9C000 1473 aa6.85□□□□□ -1.31
SCARNA15-201ENST00000607520 SAMD9LQ8IVG5 1584 aa6.85□□□□□ -1.31
SCARNA15-201ENST00000607520 PDE3BQ13370 1112 aa6.85□□□□□ -1.31
SCARNA15-201ENST00000607520 CABP2Q9NPB3 220 aa6.85□□□□□ -1.31
SCARNA15-201ENST00000607520 USP35Q9P2H5 1018 aa6.85□□□□□ -1.31
SCARNA15-201ENST00000607520 ST20-MTHFSA0A0A6YYL1 179 aa6.85□□□□□ -1.31
SCARNA15-201ENST00000607520 KRT28Q7Z3Y7 464 aa6.85□□□□□ -1.31
SCARNA15-201ENST00000607520 NLRP2Q9NX02 1062 aa6.85□□□□□ -1.31
SCARNA15-201ENST00000607520 SLAIN2Q9P270 581 aa6.85□□□□□ -1.31
SCARNA15-201ENST00000607520 TCOF1Q13428 1488 aaKnown RBP6.84□□□□□ -1.31
SCARNA15-201ENST00000607520 ZNF335Q9H4Z2 1342 aaPredicted RBP6.84□□□□□ -1.31
SCARNA15-201ENST00000607520 RTF1Q92541 710 aaKnown RBP6.84□□□□□ -1.31
SCARNA15-201ENST00000607520 MBD5Q9P267 1494 aa6.84□□□□□ -1.31
SCARNA15-201ENST00000607520 NOS1P29475 1434 aa6.84□□□□□ -1.31
SCARNA15-201ENST00000607520 HSPA5P11021 654 aaKnown RBP6.84□□□□□ -1.32
SCARNA15-201ENST00000607520 HMGB2P26583 209 aaKnown RBP6.84□□□□□ -1.32
SCARNA15-201ENST00000607520 RAPGEF4Q8WZA2 1011 aa6.84□□□□□ -1.32
SCARNA15-201ENST00000607520 CC2D1BQ5T0F9 858 aaKnown RBP6.83□□□□□ -1.32
SCARNA15-201ENST00000607520 NUDT16Q96DE0 195 aaKnown RBP6.83□□□□□ -1.32
SCARNA15-201ENST00000607520 PREX2Q70Z35 1606 aa6.83□□□□□ -1.32
SCARNA15-201ENST00000607520 NPATQ14207 1427 aa6.83□□□□□ -1.32
SCARNA15-201ENST00000607520 ZBTB47Q9UFB7 747 aaPredicted RBP6.83□□□□□ -1.32
SCARNA15-201ENST00000607520 CGNL1Q0VF96 1302 aa6.83□□□□□ -1.32
SCARNA15-201ENST00000607520 ADGRF5Q8IZF2 1346 aa6.83□□□□□ -1.32
SCARNA15-201ENST00000607520 ARHGEF5Q12774 1597 aa6.83□□□□□ -1.32
SCARNA15-201ENST00000607520 CANXP27824 592 aaKnown RBP6.83□□□□□ -1.32
SCARNA15-201ENST00000607520 LTKP29376 864 aa6.83□□□□□ -1.32
SCARNA15-201ENST00000607520 TOM1L2Q6ZVM7 507 aa6.83□□□□□ -1.32
SCARNA15-201ENST00000607520 KDM5DQ9BY66 1539 aa6.83□□□□□ -1.32
SCARNA15-201ENST00000607520 C8orf37Q96NL8 207 aa6.82□□□□□ -1.32
SCARNA15-201ENST00000607520 C14orf93Q9H972 538 aaKnown RBP6.82□□□□□ -1.32
SCARNA15-201ENST00000607520 COL17A1Q9UMD9 1497 aaPredicted RBP6.82□□□□□ -1.32
SCARNA15-201ENST00000607520 SYTL4Q96C24 671 aaPredicted RBP6.82□□□□□ -1.32
SCARNA15-201ENST00000607520 UGGT1Q9NYU2 1555 aa6.82□□□□□ -1.32
SCARNA15-201ENST00000607520 KCNH5Q8NCM2 988 aa6.82□□□□□ -1.32
SCARNA15-201ENST00000607520 WASLO00401 505 aaPredicted RBP6.81□□□□□ -1.32
SCARNA15-201ENST00000607520 ZC3H6P61129 1189 aaKnown RBP6.81□□□□□ -1.32
SCARNA15-201ENST00000607520 CABP1Q9NZU7 370 aa6.81□□□□□ -1.32
SCARNA15-201ENST00000607520 ERICH6Q7L0X2 663 aa6.81□□□□□ -1.32
SCARNA15-201ENST00000607520 ATAD2Q6PL18 1390 aa6.81□□□□□ -1.32
SCARNA15-201ENST00000607520 SCAF11Q99590 1463 aaKnown RBP6.81□□□□□ -1.32
SCARNA15-201ENST00000607520 C1orf141Q5JVX7 400 aa6.8□□□□□ -1.32
SCARNA15-201ENST00000607520 TMEM94Q12767 1356 aa6.8□□□□□ -1.32
SCARNA15-201ENST00000607520 A2ML1A8K2U0 1454 aa6.8□□□□□ -1.32
SCARNA15-201ENST00000607520 NBPF1Q3BBV0 1214 aa6.8□□□□□ -1.32
SCARNA15-201ENST00000607520 RPRD2Q5VT52 1461 aaKnown RBP6.8□□□□□ -1.32
SCARNA15-201ENST00000607520 ARHGEF40Q8TER5 1519 aa6.8□□□□□ -1.32
SCARNA15-201ENST00000607520 ARHGEF12Q9NZN5 1544 aa6.8□□□□□ -1.32
SCARNA15-201ENST00000607520 HOXD11P31277 338 aaPredicted RBP6.8□□□□□ -1.32
SCARNA15-201ENST00000607520 FBXO41Q8TF61 875 aa6.8□□□□□ -1.32
SCARNA15-201ENST00000607520 ADGRL2O95490 1459 aa6.79□□□□□ -1.32
SCARNA15-201ENST00000607520 PZPP20742 1482 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms