RNA–Protein interactions for RNA: ENST00000606826.5

CSNK1A1-211, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-211ENST00000606826 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.49□□□□□ -0.57
CSNK1A1-211ENST00000606826 METTL3Q86U44 580 aaKnown RBP11.49□□□□□ -0.57
CSNK1A1-211ENST00000606826 APLP1P51693 650 aa11.44□□□□□ -0.58
CSNK1A1-211ENST00000606826 MAP2K5Q13163 448 aa11.44□□□□□ -0.58
CSNK1A1-211ENST00000606826 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
CSNK1A1-211ENST00000606826 KCNC4Q03721 635 aa11.43□□□□□ -0.58
CSNK1A1-211ENST00000606826 NLRP7Q8WX94 980 aa11.43□□□□□ -0.58
CSNK1A1-211ENST00000606826 PRR14Q9BWN1 585 aa11.41□□□□□ -0.58
CSNK1A1-211ENST00000606826 IFFO2Q5TF58 517 aa11.4□□□□□ -0.58
CSNK1A1-211ENST00000606826 KMT5BQ4FZB7 885 aa11.39□□□□□ -0.59
CSNK1A1-211ENST00000606826 MTRQ99707 1265 aa11.39□□□□□ -0.59
CSNK1A1-211ENST00000606826 IRF6O14896 467 aa11.38□□□□□ -0.59
CSNK1A1-211ENST00000606826 CFHP08603 1231 aa11.38□□□□□ -0.59
CSNK1A1-211ENST00000606826 MINK1Q8N4C8 1332 aaPredicted RBP11.37□□□□□ -0.59
CSNK1A1-211ENST00000606826 COPS2P61201 443 aa11.37□□□□□ -0.59
CSNK1A1-211ENST00000606826 RSPH4AQ5TD94 716 aa11.37□□□□□ -0.59
CSNK1A1-211ENST00000606826 PHOX2BQ99453 314 aa11.37□□□□□ -0.59
CSNK1A1-211ENST00000606826 IL21Q9HBE4 155 aa11.37□□□□□ -0.59
CSNK1A1-211ENST00000606826 DAXXQ9UER7 740 aaPredicted RBP11.37□□□□□ -0.59
CSNK1A1-211ENST00000606826 SLC10A3P09131 477 aa11.36□□□□□ -0.59
CSNK1A1-211ENST00000606826 TJAP1Q5JTD0 557 aa11.36□□□□□ -0.59
CSNK1A1-211ENST00000606826 KRI1Q8N9T8 703 aaKnown RBP11.36□□□□□ -0.59
CSNK1A1-211ENST00000606826 RDH13Q8NBN7 331 aa11.36□□□□□ -0.59
CSNK1A1-211ENST00000606826 CCDC102AQ96A19 550 aa11.36□□□□□ -0.59
CSNK1A1-211ENST00000606826 PCDHB3Q9Y5E6 796 aa11.36□□□□□ -0.59
CSNK1A1-211ENST00000606826 A0A0G2JS52 829 aa11.35□□□□□ -0.59
CSNK1A1-211ENST00000606826 DDX11L8A8MPP1 907 aa11.35□□□□□ -0.59
CSNK1A1-211ENST00000606826 ZC3H15Q8WU90 426 aaKnown RBP11.34□□□□□ -0.59
CSNK1A1-211ENST00000606826 SULF1Q8IWU6 871 aa11.32□□□□□ -0.6
CSNK1A1-211ENST00000606826 ACTN4O43707 911 aaKnown RBP11.31□□□□□ -0.6
CSNK1A1-211ENST00000606826 ZNF516Q92618 1163 aa11.31□□□□□ -0.6
CSNK1A1-211ENST00000606826 MDM2Q00987 491 aaPredicted RBP11.3□□□□□ -0.6
CSNK1A1-211ENST00000606826 BLOC1S3Q6QNY0 202 aa11.3□□□□□ -0.6
CSNK1A1-211ENST00000606826 ZMYND10O75800 440 aa11.29□□□□□ -0.6
CSNK1A1-211ENST00000606826 BARGINQ6ZT62 677 aa11.29□□□□□ -0.6
CSNK1A1-211ENST00000606826 BCANQ96GW7 911 aa11.29□□□□□ -0.6
CSNK1A1-211ENST00000606826 ZPR1O75312 459 aa11.26□□□□□ -0.61
CSNK1A1-211ENST00000606826 NKX2-3Q8TAU0 364 aa11.25□□□□□ -0.61
CSNK1A1-211ENST00000606826 CLCN1P35523 988 aa11.24□□□□□ -0.61
CSNK1A1-211ENST00000606826 PUS10Q3MIT2 529 aaKnown RBP11.24□□□□□ -0.61
CSNK1A1-211ENST00000606826 NR1I2O75469 434 aa11.23□□□□□ -0.61
CSNK1A1-211ENST00000606826 GPCPD1Q9NPB8 672 aa11.23□□□□□ -0.61
CSNK1A1-211ENST00000606826 TLL1O43897 1013 aa11.22□□□□□ -0.61
CSNK1A1-211ENST00000606826 GCGRP47871 477 aa11.22□□□□□ -0.61
CSNK1A1-211ENST00000606826 RGS20O76081 388 aa11.21□□□□□ -0.61
CSNK1A1-211ENST00000606826 FUT2Q10981 343 aa11.21□□□□□ -0.61
CSNK1A1-211ENST00000606826 CD46P15529 392 aa11.2□□□□□ -0.62
CSNK1A1-211ENST00000606826 GGCXP38435 758 aa11.2□□□□□ -0.62
CSNK1A1-211ENST00000606826 TTLL12Q14166 644 aaPredicted RBP11.2□□□□□ -0.62
CSNK1A1-211ENST00000606826 PPP1R18Q6NYC8 613 aa11.2□□□□□ -0.62
CSNK1A1-211ENST00000606826 ATP6V1AP38606 617 aa11.18□□□□□ -0.62
CSNK1A1-211ENST00000606826 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.18□□□□□ -0.62
CSNK1A1-211ENST00000606826 SCUBE3Q8IX30 993 aa11.17□□□□□ -0.62
CSNK1A1-211ENST00000606826 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
CSNK1A1-211ENST00000606826 GRIPAP1Q4V328 841 aa11.16□□□□□ -0.62
CSNK1A1-211ENST00000606826 ADH1BP00325 375 aa11.15□□□□□ -0.62
CSNK1A1-211ENST00000606826 MORN1Q5T089 497 aa11.15□□□□□ -0.62
CSNK1A1-211ENST00000606826 AK7Q96M32 723 aa11.15□□□□□ -0.62
CSNK1A1-211ENST00000606826 KDM4AO75164 1064 aa11.14□□□□□ -0.63
CSNK1A1-211ENST00000606826 AMHR2Q16671 573 aa11.14□□□□□ -0.63
CSNK1A1-211ENST00000606826 REPIN1Q9BWE0 567 aaKnown RBP11.14□□□□□ -0.63
CSNK1A1-211ENST00000606826 TMUB1Q9BVT8 246 aa11.13□□□□□ -0.63
CSNK1A1-211ENST00000606826 S1PR4O95977 384 aa11.12□□□□□ -0.63
CSNK1A1-211ENST00000606826 SPSB2Q99619 263 aa11.12□□□□□ -0.63
CSNK1A1-211ENST00000606826 SLC24A3Q9HC58 644 aa11.12□□□□□ -0.63
CSNK1A1-211ENST00000606826 SLC27A5Q9Y2P5 690 aa11.12□□□□□ -0.63
CSNK1A1-211ENST00000606826 TRIM66O15016 1216 aa11.11□□□□□ -0.63
CSNK1A1-211ENST00000606826 SSTR3P32745 418 aaPredicted RBP11.11□□□□□ -0.63
CSNK1A1-211ENST00000606826 GIGYF2Q6Y7W6 1299 aaKnown RBP11.11□□□□□ -0.63
CSNK1A1-211ENST00000606826 FMNL1O95466 1100 aaPredicted RBP11.1□□□□□ -0.63
CSNK1A1-211ENST00000606826 NUTM1Q86Y26 1132 aa11.1□□□□□ -0.63
CSNK1A1-211ENST00000606826 SLC6A16Q9GZN6 736 aa11.1□□□□□ -0.63
CSNK1A1-211ENST00000606826 USP46P62068 366 aa11.09□□□□□ -0.63
CSNK1A1-211ENST00000606826 PRKD2Q9BZL6 878 aa11.09□□□□□ -0.63
CSNK1A1-211ENST00000606826 RNF223E7ERA6 249 aa11.08□□□□□ -0.64
CSNK1A1-211ENST00000606826 PARP9Q8IXQ6 854 aa11.08□□□□□ -0.64
CSNK1A1-211ENST00000606826 PPEF1O14829 653 aaPredicted RBP11.06□□□□□ -0.64
CSNK1A1-211ENST00000606826 HOXA2O43364 376 aa11.06□□□□□ -0.64
CSNK1A1-211ENST00000606826 HLA-CQ95604 372 aa11.06□□□□□ -0.64
CSNK1A1-211ENST00000606826 Q3C1V9 767 aa11.05□□□□□ -0.64
CSNK1A1-211ENST00000606826 RNF19BQ6ZMZ0 732 aa11.05□□□□□ -0.64
CSNK1A1-211ENST00000606826 THAP11Q96EK4 314 aa11.05□□□□□ -0.64
CSNK1A1-211ENST00000606826 IRX2Q9BZI1 471 aaPredicted RBP11.05□□□□□ -0.64
CSNK1A1-211ENST00000606826 PDE4DQ08499 809 aa11.04□□□□□ -0.64
CSNK1A1-211ENST00000606826 GUCA2AQ02747 115 aa11.03□□□□□ -0.64
CSNK1A1-211ENST00000606826 BRICD5Q6PL45 260 aa11.03□□□□□ -0.64
CSNK1A1-211ENST00000606826 ANKLE1Q8NAG6 615 aa11.03□□□□□ -0.64
CSNK1A1-211ENST00000606826 BEGAINQ9BUH8 593 aa11.03□□□□□ -0.64
CSNK1A1-211ENST00000606826 SALL2Q9Y467 1007 aaPredicted RBP11.03□□□□□ -0.64
CSNK1A1-211ENST00000606826 V9GY48 417 aaPredicted RBP11.02□□□□□ -0.65
CSNK1A1-211ENST00000606826 SPIRE2Q8WWL2 714 aa11□□□□□ -0.65
CSNK1A1-211ENST00000606826 PRDM9Q9NQV7 894 aa11□□□□□ -0.65
CSNK1A1-211ENST00000606826 MS4A1P11836 297 aa10.99□□□□□ -0.65
CSNK1A1-211ENST00000606826 FAM160A2Q8N612 972 aaPredicted RBP10.99□□□□□ -0.65
CSNK1A1-211ENST00000606826 FDX1P10109 184 aa10.98□□□□□ -0.65
CSNK1A1-211ENST00000606826 SLC19A1P41440 591 aa10.98□□□□□ -0.65
CSNK1A1-211ENST00000606826 MSS51Q4VC12 460 aa10.98□□□□□ -0.65
CSNK1A1-211ENST00000606826 USB1Q9BQ65 265 aaKnown RBP10.98□□□□□ -0.65
CSNK1A1-211ENST00000606826 FCF1Q9Y324 198 aaKnown RBP10.97□□□□□ -0.65
CSNK1A1-211ENST00000606826 MOXD2PA6NHM9 499 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms