RNA–Protein interactions for RNA: ENST00000602395.1

COMMD3-BMI1-206, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-206ENST00000602395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.5□□□□□ -0.25
COMMD3-BMI1-206ENST00000602395 GPR37O15354 613 aa13.5□□□□□ -0.25
COMMD3-BMI1-206ENST00000602395 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
COMMD3-BMI1-206ENST00000602395 IRX2Q9BZI1 471 aaPredicted RBP13.5□□□□□ -0.25
COMMD3-BMI1-206ENST00000602395 FECHP22830 423 aa13.49□□□□□ -0.25
COMMD3-BMI1-206ENST00000602395 PRR14Q9BWN1 585 aa13.49□□□□□ -0.25
COMMD3-BMI1-206ENST00000602395 GNPATO15228 680 aa13.48□□□□□ -0.25
COMMD3-BMI1-206ENST00000602395 COPS2P61201 443 aa13.48□□□□□ -0.25
COMMD3-BMI1-206ENST00000602395 PPP1R18Q6NYC8 613 aa13.47□□□□□ -0.25
COMMD3-BMI1-206ENST00000602395 NKX2-3Q8TAU0 364 aa13.47□□□□□ -0.25
COMMD3-BMI1-206ENST00000602395 METTL3Q86U44 580 aaKnown RBP13.46□□□□□ -0.25
COMMD3-BMI1-206ENST00000602395 PCDHB3Q9Y5E6 796 aa13.45□□□□□ -0.26
COMMD3-BMI1-206ENST00000602395 SLC10A3P09131 477 aa13.44□□□□□ -0.26
COMMD3-BMI1-206ENST00000602395 ZPR1O75312 459 aa13.43□□□□□ -0.26
COMMD3-BMI1-206ENST00000602395 ACTN4O43707 911 aaKnown RBP13.42□□□□□ -0.26
COMMD3-BMI1-206ENST00000602395 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.42□□□□□ -0.26
COMMD3-BMI1-206ENST00000602395 BLOC1S3Q6QNY0 202 aa13.41□□□□□ -0.26
COMMD3-BMI1-206ENST00000602395 CFHP08603 1231 aa13.4□□□□□ -0.26
COMMD3-BMI1-206ENST00000602395 KMT5BQ4FZB7 885 aa13.4□□□□□ -0.26
COMMD3-BMI1-206ENST00000602395 GPIHBP1Q8IV16 184 aa13.38□□□□□ -0.27
COMMD3-BMI1-206ENST00000602395 PRKD2Q9BZL6 878 aa13.37□□□□□ -0.27
COMMD3-BMI1-206ENST00000602395 DAXXQ9UER7 740 aaPredicted RBP13.35□□□□□ -0.27
COMMD3-BMI1-206ENST00000602395 GGCXP38435 758 aa13.34□□□□□ -0.27
COMMD3-BMI1-206ENST00000602395 PHOX2BQ99453 314 aa13.34□□□□□ -0.27
COMMD3-BMI1-206ENST00000602395 TMUB1Q9BVT8 246 aa13.34□□□□□ -0.27
COMMD3-BMI1-206ENST00000602395 RSPH4AQ5TD94 716 aa13.33□□□□□ -0.28
COMMD3-BMI1-206ENST00000602395 V9GY48 417 aaPredicted RBP13.33□□□□□ -0.28
COMMD3-BMI1-206ENST00000602395 NLRP7Q8WX94 980 aa13.31□□□□□ -0.28
COMMD3-BMI1-206ENST00000602395 TLL1O43897 1013 aa13.29□□□□□ -0.28
COMMD3-BMI1-206ENST00000602395 NR1I2O75469 434 aa13.28□□□□□ -0.28
COMMD3-BMI1-206ENST00000602395 RNF223E7ERA6 249 aa13.26□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 TULP1O00294 542 aaPredicted RBP13.26□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 LAPTM4AQ15012 233 aa13.26□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 SCUBE3Q8IX30 993 aa13.26□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 DDX11L8A8MPP1 907 aa13.25□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 GFRA3O60609 400 aa13.25□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 RDH13Q8NBN7 331 aa13.25□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 PUS10Q3MIT2 529 aaKnown RBP13.24□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 ADH1BP00325 375 aa13.22□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 MAP2K5Q13163 448 aa13.22□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 Q6ZNB5 142 aa13.22□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 SULF1Q8IWU6 871 aa13.22□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 IRF6O14896 467 aa13.21□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 S1PR4O95977 384 aa13.21□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 GCGRP47871 477 aa13.21□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 EMID1Q96A84 441 aaPredicted RBP13.21□□□□□ -0.29
COMMD3-BMI1-206ENST00000602395 ANKLE1Q8NAG6 615 aa13.2□□□□□ -0.3
COMMD3-BMI1-206ENST00000602395 PPEF1O14829 653 aaPredicted RBP13.19□□□□□ -0.3
COMMD3-BMI1-206ENST00000602395 FUT2Q10981 343 aa13.19□□□□□ -0.3
COMMD3-BMI1-206ENST00000602395 MORN1Q5T089 497 aa13.19□□□□□ -0.3
COMMD3-BMI1-206ENST00000602395 MINK1Q8N4C8 1332 aaPredicted RBP13.17□□□□□ -0.3
COMMD3-BMI1-206ENST00000602395 ATP6V1AP38606 617 aa13.17□□□□□ -0.3
COMMD3-BMI1-206ENST00000602395 SLC19A1P41440 591 aa13.17□□□□□ -0.3
COMMD3-BMI1-206ENST00000602395 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.17□□□□□ -0.3
COMMD3-BMI1-206ENST00000602395 SLC6A16Q9GZN6 736 aa13.17□□□□□ -0.3
COMMD3-BMI1-206ENST00000602395 NRG2O14511 850 aaPredicted RBP13.16□□□□□ -0.3
COMMD3-BMI1-206ENST00000602395 SPSB2Q99619 263 aa13.16□□□□□ -0.3
COMMD3-BMI1-206ENST00000602395 THAP11Q96EK4 314 aa13.14□□□□□ -0.31
COMMD3-BMI1-206ENST00000602395 PDZRN3Q9UPQ7 1066 aa13.13□□□□□ -0.31
COMMD3-BMI1-206ENST00000602395 SLC27A5Q9Y2P5 690 aa13.13□□□□□ -0.31
COMMD3-BMI1-206ENST00000602395 LCE2BO14633 110 aa13.12□□□□□ -0.31
COMMD3-BMI1-206ENST00000602395 LIAT1Q6ZQX7 453 aa13.12□□□□□ -0.31
COMMD3-BMI1-206ENST00000602395 CD46P15529 392 aa13.11□□□□□ -0.31
COMMD3-BMI1-206ENST00000602395 SPRYD7Q5W111 196 aa13.11□□□□□ -0.31
COMMD3-BMI1-206ENST00000602395 SALL2Q9Y467 1007 aaPredicted RBP13.1□□□□□ -0.31
COMMD3-BMI1-206ENST00000602395 MDM2Q00987 491 aaPredicted RBP13.09□□□□□ -0.31
COMMD3-BMI1-206ENST00000602395 TRAF7Q6Q0C0 670 aa13.09□□□□□ -0.31
COMMD3-BMI1-206ENST00000602395 TRIM67Q6ZTA4 783 aa13.09□□□□□ -0.31
COMMD3-BMI1-206ENST00000602395 ZNF598Q86UK7 904 aaKnown RBP13.09□□□□□ -0.31
COMMD3-BMI1-206ENST00000602395 CCDC102AQ96A19 550 aa13.09□□□□□ -0.31
COMMD3-BMI1-206ENST00000602395 PLA2G2CQ5R387 149 aa13.08□□□□□ -0.32
COMMD3-BMI1-206ENST00000602395 BRICD5Q6PL45 260 aa13.08□□□□□ -0.32
COMMD3-BMI1-206ENST00000602395 FAM160A2Q8N612 972 aaPredicted RBP13.08□□□□□ -0.32
COMMD3-BMI1-206ENST00000602395 FMNL1O95466 1100 aaPredicted RBP13.07□□□□□ -0.32
COMMD3-BMI1-206ENST00000602395 GRIPAP1Q4V328 841 aa13.06□□□□□ -0.32
COMMD3-BMI1-206ENST00000602395 LMOD2Q6P5Q4 547 aa13.05□□□□□ -0.32
COMMD3-BMI1-206ENST00000602395 KDM4AO75164 1064 aa13.02□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 ZNF697Q5TEC3 545 aa13.02□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 RNF19BQ6ZMZ0 732 aa13.02□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 GPCPD1Q9NPB8 672 aa13.01□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 CLCN1P35523 988 aa13□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 PRR20EP86478 221 aa13□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 PRR20CP86479 221 aa13□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 PRR20DP86480 221 aa13□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 PRR20BP86481 221 aa13□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 PRR20AP86496 221 aa13□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 MSS51Q4VC12 460 aa12.99□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 BARGINQ6ZT62 677 aa12.99□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 FAM217BQ9NTX9 383 aaPredicted RBP12.99□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 GDF9O60383 454 aa12.98□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 USP46P62068 366 aa12.98□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 Q3C1V9 767 aa12.98□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 PRDM9Q9NQV7 894 aa12.98□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 FCF1Q9Y324 198 aaKnown RBP12.98□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 ZMYND10O75800 440 aa12.97□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 RPIAP49247 311 aa12.97□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 KRI1Q8N9T8 703 aaKnown RBP12.96□□□□□ -0.33
COMMD3-BMI1-206ENST00000602395 ZC3H15Q8WU90 426 aaKnown RBP12.95□□□□□ -0.34
COMMD3-BMI1-206ENST00000602395 REPIN1Q9BWE0 567 aaKnown RBP12.95□□□□□ -0.34
COMMD3-BMI1-206ENST00000602395 HLA-CQ95604 372 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms