RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 RSPH6AQ9H0K4 717 aa14.79□□□□□ -0.04
FARP1-235ENST00000601656 ATP1B4Q9UN42 357 aaPredicted RBP14.79□□□□□ -0.04
FARP1-235ENST00000601656 MLH3Q9UHC1 1453 aa14.78□□□□□ -0.04
FARP1-235ENST00000601656 ZMYM3Q14202 1370 aa14.78□□□□□ -0.04
FARP1-235ENST00000601656 ARHGAP5Q13017 1502 aa14.77□□□□□ -0.04
FARP1-235ENST00000601656 CDK11AQ9UQ88 783 aaPredicted RBP14.76□□□□□ -0.05
FARP1-235ENST00000601656 PLA2R1Q13018 1463 aa14.76□□□□□ -0.05
FARP1-235ENST00000601656 HRCP23327 699 aa14.75□□□□□ -0.05
FARP1-235ENST00000601656 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
FARP1-235ENST00000601656 TCOF1Q13428 1488 aaKnown RBP14.75□□□□□ -0.05
FARP1-235ENST00000601656 MROH2AA6NES4 1674 aa14.74□□□□□ -0.05
FARP1-235ENST00000601656 TESPA1A2RU30 521 aaPredicted RBP14.74□□□□□ -0.05
FARP1-235ENST00000601656 ZMYND10O75800 440 aa14.74□□□□□ -0.05
FARP1-235ENST00000601656 KIF14Q15058 1648 aa14.73□□□□□ -0.05
FARP1-235ENST00000601656 ZNF142P52746 1687 aaPredicted RBP14.72□□□□□ -0.05
FARP1-235ENST00000601656 CEP170BQ9Y4F5 1589 aaPredicted RBP14.71□□□□□ -0.05
FARP1-235ENST00000601656 KIDINS220Q9ULH0 1771 aa14.7□□□□□ -0.06
FARP1-235ENST00000601656 MYO3AQ8NEV4 1616 aa14.7□□□□□ -0.06
FARP1-235ENST00000601656 CDC42BPBQ9Y5S2 1711 aa14.7□□□□□ -0.06
FARP1-235ENST00000601656 MS4A3Q96HJ5 214 aa14.7□□□□□ -0.06
FARP1-235ENST00000601656 RGS17Q9UGC6 210 aaPredicted RBP14.7□□□□□ -0.06
FARP1-235ENST00000601656 CPS1P31327 1500 aa14.7□□□□□ -0.06
FARP1-235ENST00000601656 PTPRKQ15262 1439 aa14.69□□□□□ -0.06
FARP1-235ENST00000601656 SHANK2Q9UPX8 1470 aa14.69□□□□□ -0.06
FARP1-235ENST00000601656 CLTCQ00610 1675 aaKnown RBP14.68□□□□□ -0.06
FARP1-235ENST00000601656 RASEFQ8IZ41 740 aa14.68□□□□□ -0.06
FARP1-235ENST00000601656 SEMA3EO15041 775 aa14.66□□□□□ -0.06
FARP1-235ENST00000601656 KIF12Q96FN5 646 aa14.66□□□□□ -0.06
FARP1-235ENST00000601656 TROQ12816 1431 aaPredicted RBP14.66□□□□□ -0.06
FARP1-235ENST00000601656 ITSN2Q9NZM3 1697 aa14.65□□□□□ -0.06
FARP1-235ENST00000601656 CLIP1P30622 1438 aa14.65□□□□□ -0.06
FARP1-235ENST00000601656 GGT6Q6P531 493 aa14.64□□□□□ -0.07
FARP1-235ENST00000601656 ABCC1P33527 1531 aa14.64□□□□□ -0.07
FARP1-235ENST00000601656 ALKQ9UM73 1620 aa14.63□□□□□ -0.07
FARP1-235ENST00000601656 E2F4Q16254 413 aa14.63□□□□□ -0.07
FARP1-235ENST00000601656 POLR1AO95602 1720 aaPredicted RBP14.63□□□□□ -0.07
FARP1-235ENST00000601656 DNMT1P26358 1616 aaKnown RBP14.63□□□□□ -0.07
FARP1-235ENST00000601656 ASTLQ6HA08 431 aaPredicted RBP14.62□□□□□ -0.07
FARP1-235ENST00000601656 A2ML1A8K2U0 1454 aa14.62□□□□□ -0.07
FARP1-235ENST00000601656 SMYD5Q6GMV2 418 aa14.61□□□□□ -0.07
FARP1-235ENST00000601656 FMN1Q68DA7 1419 aa14.6□□□□□ -0.07
FARP1-235ENST00000601656 PREX2Q70Z35 1606 aa14.6□□□□□ -0.07
FARP1-235ENST00000601656 BARGINQ6ZT62 677 aa14.6□□□□□ -0.07
FARP1-235ENST00000601656 ANKLE2Q86XL3 938 aa14.6□□□□□ -0.07
FARP1-235ENST00000601656 SPAG9O60271 1321 aaKnown RBP14.6□□□□□ -0.07
FARP1-235ENST00000601656 POTEAQ6S8J7 498 aa14.59□□□□□ -0.07
FARP1-235ENST00000601656 ZNF777Q9ULD5 760 aaPredicted RBP14.59□□□□□ -0.07
FARP1-235ENST00000601656 SAMD9LQ8IVG5 1584 aa14.59□□□□□ -0.07
FARP1-235ENST00000601656 NEURL4Q96JN8 1562 aa14.59□□□□□ -0.07
FARP1-235ENST00000601656 VWDEQ8N2E2 1590 aa14.58□□□□□ -0.08
FARP1-235ENST00000601656 ATMINO43313 823 aaPredicted RBP14.57□□□□□ -0.08
FARP1-235ENST00000601656 HNRNPMP52272 730 aaKnown RBP eCLIP14.57□□□□□ -0.08
FARP1-235ENST00000601656 MAP3K13O43283 966 aa14.56□□□□□ -0.08
FARP1-235ENST00000601656 AK7Q96M32 723 aa14.56□□□□□ -0.08
FARP1-235ENST00000601656 SLC39A7Q92504 469 aa14.55□□□□□ -0.08
FARP1-235ENST00000601656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.55□□□□□ -0.08
FARP1-235ENST00000601656 LRRIQ1Q96JM4 1722 aa14.55□□□□□ -0.08
FARP1-235ENST00000601656 C7P10643 843 aa14.54□□□□□ -0.08
FARP1-235ENST00000601656 PYGBP11216 843 aa14.54□□□□□ -0.08
FARP1-235ENST00000601656 FBXO31Q5XUX0 539 aaPredicted RBP14.54□□□□□ -0.08
FARP1-235ENST00000601656 THEMISQ8N1K5 641 aaPredicted RBP14.54□□□□□ -0.08
FARP1-235ENST00000601656 A2MP01023 1474 aa14.54□□□□□ -0.08
FARP1-235ENST00000601656 CDC42BPAQ5VT25 1732 aa14.54□□□□□ -0.08
FARP1-235ENST00000601656 PELP1Q8IZL8 1130 aaKnown RBP14.53□□□□□ -0.08
FARP1-235ENST00000601656 ARID3AQ99856 593 aa14.53□□□□□ -0.08
FARP1-235ENST00000601656 IL27Q8NEV9 243 aa14.52□□□□□ -0.09
FARP1-235ENST00000601656 STRCP1A6NGW2 1772 aa14.52□□□□□ -0.09
FARP1-235ENST00000601656 PLXNC1O60486 1568 aa14.51□□□□□ -0.09
FARP1-235ENST00000601656 ATP7AQ04656 1500 aa14.51□□□□□ -0.09
FARP1-235ENST00000601656 LRRC7Q96NW7 1537 aa14.51□□□□□ -0.09
FARP1-235ENST00000601656 NPHP4O75161 1426 aaPredicted RBP14.51□□□□□ -0.09
FARP1-235ENST00000601656 EEA1Q15075 1411 aa14.51□□□□□ -0.09
FARP1-235ENST00000601656 TNRQ92752 1358 aa14.51□□□□□ -0.09
FARP1-235ENST00000601656 GPBP1L1Q9HC44 474 aaPredicted RBP14.51□□□□□ -0.09
FARP1-235ENST00000601656 TIE1P35590 1138 aa14.5□□□□□ -0.09
FARP1-235ENST00000601656 C1orf115Q9H7X2 142 aa14.5□□□□□ -0.09
FARP1-235ENST00000601656 SYCP2Q9BX26 1530 aa14.5□□□□□ -0.09
FARP1-235ENST00000601656 RNF17Q9BXT8 1623 aaKnown RBP14.49□□□□□ -0.09
FARP1-235ENST00000601656 METRNQ9UJH8 293 aa14.49□□□□□ -0.09
FARP1-235ENST00000601656 MED14O60244 1454 aa14.49□□□□□ -0.09
FARP1-235ENST00000601656 ARHGAP35Q9NRY4 1499 aa14.49□□□□□ -0.09
FARP1-235ENST00000601656 SETD1AO15047 1707 aaKnown RBP14.48□□□□□ -0.09
FARP1-235ENST00000601656 PCDHB13Q9Y5F0 798 aa14.47□□□□□ -0.09
FARP1-235ENST00000601656 DEPDC5O75140 1603 aa14.47□□□□□ -0.09
FARP1-235ENST00000601656 IQGAP1P46940 1657 aa14.46□□□□□ -0.09
FARP1-235ENST00000601656 KDM4CQ9H3R0 1056 aa14.46□□□□□ -0.09
FARP1-235ENST00000601656 INO80Q9ULG1 1556 aaPredicted RBP14.46□□□□□ -0.09
FARP1-235ENST00000601656 ADGBQ8N7X0 1667 aa14.46□□□□□ -0.1
FARP1-235ENST00000601656 ATN1P54259 1190 aaPredicted RBP14.45□□□□□ -0.1
FARP1-235ENST00000601656 BMP2KQ9NSY1 1161 aaPredicted RBP14.45□□□□□ -0.1
FARP1-235ENST00000601656 FAM135AQ9P2D6 1515 aa14.45□□□□□ -0.1
FARP1-235ENST00000601656 UGGT1Q9NYU2 1555 aa14.44□□□□□ -0.1
FARP1-235ENST00000601656 ZBTB7CA1YPR0 619 aa14.44□□□□□ -0.1
FARP1-235ENST00000601656 CCDC9Q9Y3X0 531 aaKnown RBP14.44□□□□□ -0.1
FARP1-235ENST00000601656 SYNMO15061 1565 aa14.43□□□□□ -0.1
FARP1-235ENST00000601656 MIA2Q96PC5 1412 aa14.43□□□□□ -0.1
FARP1-235ENST00000601656 GPATCH8Q9UKJ3 1502 aaKnown RBP14.43□□□□□ -0.1
FARP1-235ENST00000601656 UPF1Q92900 1129 aaKnown RBP eCLIP14.43□□□□□ -0.1
FARP1-235ENST00000601656 MFRPQ9BY79 579 aa14.43□□□□□ -0.1
FARP1-235ENST00000601656 KIAA1107Q9UPP5 1409 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms