RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 TPM2P07951 284 aa20.37■□□□□ 0.85
SYDE1-204ENST00000600440 DDX11L8A8MPP1 907 aa20.36■□□□□ 0.85
SYDE1-204ENST00000600440 NLRP1Q9C000 1473 aa20.35■□□□□ 0.85
SYDE1-204ENST00000600440 DNMBPQ6XZF7 1577 aa20.35■□□□□ 0.85
SYDE1-204ENST00000600440 NKTRP30414 1462 aaKnown RBP20.35■□□□□ 0.85
SYDE1-204ENST00000600440 CAMSAP2Q08AD1 1489 aa20.35■□□□□ 0.85
SYDE1-204ENST00000600440 E9PSI1 815 aa20.35■□□□□ 0.85
SYDE1-204ENST00000600440 ZNF608Q9ULD9 1512 aaPredicted RBP20.34■□□□□ 0.85
SYDE1-204ENST00000600440 E9PCH4 1651 aa20.34■□□□□ 0.85
SYDE1-204ENST00000600440 RLBP1P12271 317 aa20.34■□□□□ 0.85
SYDE1-204ENST00000600440 R3HCC1Q9Y3T6 440 aaKnown RBP20.34■□□□□ 0.85
SYDE1-204ENST00000600440 PRG4Q92954 1404 aaPredicted RBP20.34■□□□□ 0.85
SYDE1-204ENST00000600440 MSNP26038 577 aaKnown RBP20.33■□□□□ 0.84
SYDE1-204ENST00000600440 TSPY4P0CV99 314 aa20.33■□□□□ 0.84
SYDE1-204ENST00000600440 TSPY10P0CW01 314 aa20.33■□□□□ 0.84
SYDE1-204ENST00000600440 PMFBP1Q8TBY8 1022 aa20.33■□□□□ 0.84
SYDE1-204ENST00000600440 TNNT2P45379 298 aaPredicted RBP20.32■□□□□ 0.84
SYDE1-204ENST00000600440 HSP90AB1P08238 724 aaKnown RBP20.32■□□□□ 0.84
SYDE1-204ENST00000600440 PDE3AQ14432 1141 aa20.32■□□□□ 0.84
SYDE1-204ENST00000600440 ANP32BQ92688 251 aaKnown RBP20.32■□□□□ 0.84
SYDE1-204ENST00000600440 ERBINQ96RT1 1412 aa20.32■□□□□ 0.84
SYDE1-204ENST00000600440 TNPO1Q92973 898 aaKnown RBP20.31■□□□□ 0.84
SYDE1-204ENST00000600440 PRDM10Q9NQV6 1147 aa20.3■□□□□ 0.84
SYDE1-204ENST00000600440 NCLP19338 710 aaKnown RBP20.3■□□□□ 0.84
SYDE1-204ENST00000600440 NASPP49321 788 aaPredicted RBP20.28■□□□□ 0.84
SYDE1-204ENST00000600440 HNRNPMP52272 730 aaKnown RBP eCLIP20.28■□□□□ 0.84
SYDE1-204ENST00000600440 RWDD1Q9H446 243 aaPredicted RBP20.28■□□□□ 0.84
SYDE1-204ENST00000600440 COL17A1Q9UMD9 1497 aaPredicted RBP20.27■□□□□ 0.84
SYDE1-204ENST00000600440 CCDC144AA2RUR9 1427 aa20.26■□□□□ 0.83
SYDE1-204ENST00000600440 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
SYDE1-204ENST00000600440 TRMT2AQ8IZ69 625 aaKnown RBP20.26■□□□□ 0.83
SYDE1-204ENST00000600440 PRAG1Q86YV5 1406 aa20.26■□□□□ 0.83
SYDE1-204ENST00000600440 AMER1Q5JTC6 1135 aaPredicted RBP20.25■□□□□ 0.83
SYDE1-204ENST00000600440 GBP4Q96PP9 640 aa20.25■□□□□ 0.83
SYDE1-204ENST00000600440 ZHX1Q9UKY1 873 aaPredicted RBP20.25■□□□□ 0.83
SYDE1-204ENST00000600440 ARHGEF12Q9NZN5 1544 aa20.25■□□□□ 0.83
SYDE1-204ENST00000600440 LAMC3Q9Y6N6 1575 aa20.24■□□□□ 0.83
SYDE1-204ENST00000600440 WDR62O43379 1518 aa20.24■□□□□ 0.83
SYDE1-204ENST00000600440 RIPK4P57078 832 aa20.23■□□□□ 0.83
SYDE1-204ENST00000600440 XPCQ01831 940 aaPredicted RBP20.23■□□□□ 0.83
SYDE1-204ENST00000600440 ZSCAN30Q86W11 494 aa20.23■□□□□ 0.83
SYDE1-204ENST00000600440 FTSJ3Q8IY81 847 aaKnown RBP20.23■□□□□ 0.83
SYDE1-204ENST00000600440 PDS5BQ9NTI5 1447 aa20.23■□□□□ 0.83
SYDE1-204ENST00000600440 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
SYDE1-204ENST00000600440 INSRP06213 1382 aa20.22■□□□□ 0.83
SYDE1-204ENST00000600440 CALD1Q05682 793 aaKnown RBP20.22■□□□□ 0.83
SYDE1-204ENST00000600440 VIRMAQ69YN4 1812 aaKnown RBP20.21■□□□□ 0.83
SYDE1-204ENST00000600440 WWC1Q8IX03 1113 aa20.21■□□□□ 0.83
SYDE1-204ENST00000600440 DDX49Q9Y6V7 483 aaKnown RBP20.21■□□□□ 0.83
SYDE1-204ENST00000600440 RARSP54136 660 aaKnown RBP20.21■□□□□ 0.83
SYDE1-204ENST00000600440 MAGI2Q86UL8 1455 aa20.2■□□□□ 0.82
SYDE1-204ENST00000600440 CCDC173Q0VFZ6 552 aa20.2■□□□□ 0.82
SYDE1-204ENST00000600440 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
SYDE1-204ENST00000600440 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.19■□□□□ 0.82
SYDE1-204ENST00000600440 PRDM4Q9UKN5 801 aa20.19■□□□□ 0.82
SYDE1-204ENST00000600440 ZNF692Q9BU19 519 aaPredicted RBP20.19■□□□□ 0.82
SYDE1-204ENST00000600440 UQCRHLA0A096LP55 91 aa20.18■□□□□ 0.82
SYDE1-204ENST00000600440 UQCRHP07919 91 aa20.18■□□□□ 0.82
SYDE1-204ENST00000600440 OFD1O75665 1012 aa20.18■□□□□ 0.82
SYDE1-204ENST00000600440 SSFA2P28290 1259 aa20.17■□□□□ 0.82
SYDE1-204ENST00000600440 ISY1Q9ULR0 285 aaKnown RBP20.17■□□□□ 0.82
SYDE1-204ENST00000600440 C9orf84Q5VXU9 1444 aa20.16■□□□□ 0.82
SYDE1-204ENST00000600440 IQGAP2Q13576 1575 aa20.16■□□□□ 0.82
SYDE1-204ENST00000600440 GPATCH8Q9UKJ3 1502 aaKnown RBP20.15■□□□□ 0.82
SYDE1-204ENST00000600440 ITPRIPQ8IWB1 547 aa20.15■□□□□ 0.82
SYDE1-204ENST00000600440 NUP153P49790 1475 aaKnown RBP20.15■□□□□ 0.82
SYDE1-204ENST00000600440 GOLGA6L22H0YM25 854 aa20.14■□□□□ 0.82
SYDE1-204ENST00000600440 RBM42Q9BTD8 480 aaKnown RBP20.14■□□□□ 0.82
SYDE1-204ENST00000600440 LNPKQ9C0E8 428 aa20.14■□□□□ 0.81
SYDE1-204ENST00000600440 SKOR2Q2VWA4 1001 aaPredicted RBP20.13■□□□□ 0.81
SYDE1-204ENST00000600440 CAVIN1Q6NZI2 390 aaKnown RBP20.13■□□□□ 0.81
SYDE1-204ENST00000600440 CD2BP2O95400 341 aaKnown RBP20.13■□□□□ 0.81
SYDE1-204ENST00000600440 KDM5DQ9BY66 1539 aa20.12■□□□□ 0.81
SYDE1-204ENST00000600440 MPNDQ8N594 471 aa20.11■□□□□ 0.81
SYDE1-204ENST00000600440 TROQ12816 1431 aaPredicted RBP20.11■□□□□ 0.81
SYDE1-204ENST00000600440 MCTP1Q6DN14 999 aa20.1■□□□□ 0.81
SYDE1-204ENST00000600440 TCP11L2Q8N4U5 519 aa20.1■□□□□ 0.81
SYDE1-204ENST00000600440 RAB3GAP1Q15042 981 aa20.1■□□□□ 0.81
SYDE1-204ENST00000600440 A2MP01023 1474 aa20.1■□□□□ 0.81
SYDE1-204ENST00000600440 TRPM1Q7Z4N2 1603 aa20.1■□□□□ 0.81
SYDE1-204ENST00000600440 MVPQ14764 893 aaKnown RBP20.09■□□□□ 0.81
SYDE1-204ENST00000600440 ADGBQ8N7X0 1667 aa20.09■□□□□ 0.81
SYDE1-204ENST00000600440 DZIP1LQ8IYY4 767 aaKnown RBP20.08■□□□□ 0.81
SYDE1-204ENST00000600440 ADGRL2O95490 1459 aa20.08■□□□□ 0.8
SYDE1-204ENST00000600440 RTEL1-TNFRSF6BF6WH68 1400 aa20.08■□□□□ 0.8
SYDE1-204ENST00000600440 TSR2Q969E8 191 aaKnown RBP20.08■□□□□ 0.8
SYDE1-204ENST00000600440 CEP170Q5SW79 1584 aa20.08■□□□□ 0.8
SYDE1-204ENST00000600440 WDR7Q9Y4E6 1490 aa20.07■□□□□ 0.8
SYDE1-204ENST00000600440 PLEKHD1A6NEE1 506 aa20.07■□□□□ 0.8
SYDE1-204ENST00000600440 SMC4Q9NTJ3 1288 aa20.07■□□□□ 0.8
SYDE1-204ENST00000600440 PPP1R9BQ96SB3 815 aa20.07■□□□□ 0.8
SYDE1-204ENST00000600440 NINLQ9Y2I6 1382 aa20.07■□□□□ 0.8
SYDE1-204ENST00000600440 DNTTIP2Q5QJE6 756 aaKnown RBP20.06■□□□□ 0.8
SYDE1-204ENST00000600440 JARID2Q92833 1246 aaPredicted RBP20.06■□□□□ 0.8
SYDE1-204ENST00000600440 ZKSCAN2Q63HK3 967 aa20.06■□□□□ 0.8
SYDE1-204ENST00000600440 GPRASP1Q5JY77 1395 aa20.06■□□□□ 0.8
SYDE1-204ENST00000600440 CDCA8Q53HL2 280 aa20.06■□□□□ 0.8
SYDE1-204ENST00000600440 FBLN2P98095 1184 aa20.05■□□□□ 0.8
SYDE1-204ENST00000600440 FOXD4L5Q5VV16 416 aaPredicted RBP20.05■□□□□ 0.8
SYDE1-204ENST00000600440 SMC5Q8IY18 1101 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms