RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.23■■■□□ 2.11
SSBP4-207ENST00000600244 AFF2P51816 1311 aa28.22■■■□□ 2.11
SSBP4-207ENST00000600244 ERBINQ96RT1 1412 aa28.21■■■□□ 2.11
SSBP4-207ENST00000600244 KIF15Q9NS87 1388 aa28.21■■■□□ 2.11
SSBP4-207ENST00000600244 DIP2AQ14689 1571 aa28.2■■■□□ 2.11
SSBP4-207ENST00000600244 NOS1P29475 1434 aa28.2■■■□□ 2.11
SSBP4-207ENST00000600244 ADGRB3O60242 1522 aa28.2■■■□□ 2.1
SSBP4-207ENST00000600244 NUTM2BA6NNL0 878 aaPredicted RBP28.2■■■□□ 2.1
SSBP4-207ENST00000600244 NUTM2EB1AL46 878 aaPredicted RBP28.2■■■□□ 2.1
SSBP4-207ENST00000600244 CADPS2Q86UW7 1296 aa28.2■■■□□ 2.1
SSBP4-207ENST00000600244 NUTM2AQ8IVF1 878 aaPredicted RBP28.2■■■□□ 2.1
SSBP4-207ENST00000600244 RGS12O14924 1447 aa28.19■■■□□ 2.1
SSBP4-207ENST00000600244 C19orf44Q9H6X5 657 aa28.18■■■□□ 2.1
SSBP4-207ENST00000600244 PLEKHG1Q9ULL1 1385 aa28.18■■■□□ 2.1
SSBP4-207ENST00000600244 LMTK2Q8IWU2 1503 aa28.18■■■□□ 2.1
SSBP4-207ENST00000600244 KANK1Q14678 1352 aa28.16■■■□□ 2.1
SSBP4-207ENST00000600244 RBM6P78332 1123 aaKnown RBP28.16■■■□□ 2.1
SSBP4-207ENST00000600244 SLC52A1Q9NWF4 448 aa28.16■■■□□ 2.1
SSBP4-207ENST00000600244 TBX22Q9Y458 520 aa28.16■■■□□ 2.1
SSBP4-207ENST00000600244 ZFYVE9O95405 1425 aa28.16■■■□□ 2.1
SSBP4-207ENST00000600244 MYOM3Q5VTT5 1437 aa28.16■■■□□ 2.1
SSBP4-207ENST00000600244 RRP7BPQ9NSQ0 103 aa28.15■■■□□ 2.1
SSBP4-207ENST00000600244 ATF3P18847 181 aa28.14■■■□□ 2.1
SSBP4-207ENST00000600244 BRINP3Q76B58 766 aa28.14■■■□□ 2.1
SSBP4-207ENST00000600244 C14orf37Q86TY3 774 aa28.14■■■□□ 2.1
SSBP4-207ENST00000600244 QTRT2Q9H974 415 aaKnown RBP28.14■■■□□ 2.1
SSBP4-207ENST00000600244 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.14■■■□□ 2.1
SSBP4-207ENST00000600244 NUTM2DQ5VT03 806 aaPredicted RBP28.1■■■□□ 2.09
SSBP4-207ENST00000600244 SETD5Q9C0A6 1442 aa28.09■■■□□ 2.09
SSBP4-207ENST00000600244 HDGFP51858 240 aaKnown RBP28.07■■■□□ 2.08
SSBP4-207ENST00000600244 ZRANB1Q9UGI0 708 aa28.07■■■□□ 2.08
SSBP4-207ENST00000600244 ABCC5O15440 1437 aa28.07■■■□□ 2.08
SSBP4-207ENST00000600244 RIMS2Q9UQ26 1411 aa28.06■■■□□ 2.08
SSBP4-207ENST00000600244 PPP1R15AO75807 674 aaPredicted RBP28.04■■■□□ 2.08
SSBP4-207ENST00000600244 C8orf37Q96NL8 207 aa28.04■■■□□ 2.08
SSBP4-207ENST00000600244 ADAMTS13Q76LX8 1427 aa28.03■■■□□ 2.08
SSBP4-207ENST00000600244 ATAD2Q6PL18 1390 aa28.03■■■□□ 2.08
SSBP4-207ENST00000600244 PIK3R4Q99570 1358 aa28.01■■■□□ 2.07
SSBP4-207ENST00000600244 FOXD1Q16676 465 aa28.01■■■□□ 2.07
SSBP4-207ENST00000600244 LRRC59Q96AG4 307 aaKnown RBP28.01■■■□□ 2.07
SSBP4-207ENST00000600244 SETBP1Q9Y6X0 1596 aa28.01■■■□□ 2.07
SSBP4-207ENST00000600244 ASXL1Q8IXJ9 1541 aa27.99■■■□□ 2.07
SSBP4-207ENST00000600244 KANK4Q5T7N3 995 aaPredicted RBP27.99■■■□□ 2.07
SSBP4-207ENST00000600244 NGLY1Q96IV0 654 aa27.99■■■□□ 2.07
SSBP4-207ENST00000600244 MYO5BQ9ULV0 1848 aa27.98■■■□□ 2.07
SSBP4-207ENST00000600244 CROCC2H7BZ55 1655 aa27.97■■■□□ 2.07
SSBP4-207ENST00000600244 DCCP43146 1447 aa27.96■■■□□ 2.07
SSBP4-207ENST00000600244 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.96■■■□□ 2.07
SSBP4-207ENST00000600244 PNPLA6Q8IY17 1366 aa27.96■■■□□ 2.07
SSBP4-207ENST00000600244 TMEM131LA2VDJ0 1609 aa27.96■■■□□ 2.07
SSBP4-207ENST00000600244 NHSL1Q5SYE7 1610 aa27.95■■■□□ 2.06
SSBP4-207ENST00000600244 AMOTL2Q9Y2J4 779 aa27.94■■■□□ 2.06
SSBP4-207ENST00000600244 RPRD2Q5VT52 1461 aaKnown RBP27.94■■■□□ 2.06
SSBP4-207ENST00000600244 DAPK1P53355 1430 aa27.92■■■□□ 2.06
SSBP4-207ENST00000600244 MST1RQ04912 1400 aa27.92■■■□□ 2.06
SSBP4-207ENST00000600244 PTPRUQ92729 1446 aa27.92■■■□□ 2.06
SSBP4-207ENST00000600244 GCC2Q8IWJ2 1684 aa27.91■■■□□ 2.06
SSBP4-207ENST00000600244 ANKRD30AQ9BXX3 1397 aa27.88■■■□□ 2.05
SSBP4-207ENST00000600244 CCDC125Q86Z20 511 aa27.88■■■□□ 2.05
SSBP4-207ENST00000600244 DDX17Q92841 729 aaKnown RBP27.88■■■□□ 2.05
SSBP4-207ENST00000600244 ADAMTS2O95450 1211 aa27.87■■■□□ 2.05
SSBP4-207ENST00000600244 CHIC2Q9UKJ5 165 aa27.85■■■□□ 2.05
SSBP4-207ENST00000600244 TRPC5Q9UL62 973 aaPredicted RBP27.85■■■□□ 2.05
SSBP4-207ENST00000600244 TRPM2O94759 1503 aa27.84■■■□□ 2.05
SSBP4-207ENST00000600244 USP21Q9UK80 565 aa27.84■■■□□ 2.05
SSBP4-207ENST00000600244 PTPN23Q9H3S7 1636 aa27.82■■■□□ 2.04
SSBP4-207ENST00000600244 FNBP4Q8N3X1 1017 aaPredicted RBP27.82■■■□□ 2.04
SSBP4-207ENST00000600244 VPS8Q8N3P4 1428 aa27.82■■■□□ 2.04
SSBP4-207ENST00000600244 CHGAP10645 457 aaKnown RBP27.81■■■□□ 2.04
SSBP4-207ENST00000600244 EP400Q96L91 3159 aa27.79■■■□□ 2.04
SSBP4-207ENST00000600244 ATRNO75882 1429 aa27.79■■■□□ 2.04
SSBP4-207ENST00000600244 XRN1Q8IZH2 1706 aaKnown RBP27.76■■■□□ 2.03
SSBP4-207ENST00000600244 UNC13BO14795 1591 aa27.73■■■□□ 2.03
SSBP4-207ENST00000600244 PTCH1Q13635 1447 aa27.73■■■□□ 2.03
SSBP4-207ENST00000600244 SOS2Q07890 1332 aaPredicted RBP27.71■■■□□ 2.03
SSBP4-207ENST00000600244 ADGRL3Q9HAR2 1447 aa27.71■■■□□ 2.03
SSBP4-207ENST00000600244 LAMC1P11047 1609 aa27.7■■■□□ 2.02
SSBP4-207ENST00000600244 ADGRL2O95490 1459 aa27.7■■■□□ 2.02
SSBP4-207ENST00000600244 ANKRD50Q9ULJ7 1429 aa27.67■■■□□ 2.02
SSBP4-207ENST00000600244 NRXN3Q9Y4C0 1643 aa27.67■■■□□ 2.02
SSBP4-207ENST00000600244 C1orf167Q5SNV9 1468 aa27.66■■■□□ 2.02
SSBP4-207ENST00000600244 BCL9LQ86UU0 1499 aa27.65■■■□□ 2.02
SSBP4-207ENST00000600244 METP08581 1390 aa27.65■■■□□ 2.02
SSBP4-207ENST00000600244 LRP5O75197 1615 aa27.63■■■□□ 2.01
SSBP4-207ENST00000600244 BLMP54132 1417 aaPredicted RBP27.63■■■□□ 2.01
SSBP4-207ENST00000600244 GJD4Q96KN9 370 aaPredicted RBP27.62■■■□□ 2.01
SSBP4-207ENST00000600244 E9PCH4 1651 aa27.6■■■□□ 2.01
SSBP4-207ENST00000600244 ORAI2Q96SN7 254 aa27.6■■■□□ 2.01
SSBP4-207ENST00000600244 NALCNQ8IZF0 1738 aa27.6■■■□□ 2.01
SSBP4-207ENST00000600244 DEFB132Q7Z7B7 95 aa27.59■■■□□ 2.01
SSBP4-207ENST00000600244 COL22A1Q8NFW1 1626 aaPredicted RBP27.59■■■□□ 2.01
SSBP4-207ENST00000600244 MYOM2P54296 1465 aa27.57■■■□□ 2
SSBP4-207ENST00000600244 IQGAP3Q86VI3 1631 aa27.49■■□□□ 1.99
SSBP4-207ENST00000600244 GLI3P10071 1580 aa27.47■■□□□ 1.99
SSBP4-207ENST00000600244 RALGAPBQ86X10 1494 aa27.46■■□□□ 1.99
SSBP4-207ENST00000600244 HRCP23327 699 aa27.46■■□□□ 1.99
SSBP4-207ENST00000600244 MARF1Q9Y4F3 1742 aaKnown RBP27.46■■□□□ 1.99
SSBP4-207ENST00000600244 SF3B2Q13435 895 aaKnown RBP27.45■■□□□ 1.98
SSBP4-207ENST00000600244 UNC5CLQ8IV45 518 aa27.45■■□□□ 1.98
SSBP4-207ENST00000600244 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms