RNA–Protein interactions for RNA: ENST00000599687.1

SNRNP70-208, Transcript of small nuclear ribonucleoprotein U1 subunit 70, human

TSL 2

Gene SNRNP70, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP70-208	ENST00000599687	ZMYM4	Q5VZL5	1548 aa		13.9	□□□□□ -0.19
SNRNP70-208	ENST00000599687	ZNF710	Q8N1W2	664 aa		13.89	□□□□□ -0.19
SNRNP70-208	ENST00000599687	POGZ	Q7Z3K3	1410 aa		13.89	□□□□□ -0.19
SNRNP70-208	ENST00000599687	MAGI2	Q86UL8	1455 aa		13.87	□□□□□ -0.19
SNRNP70-208	ENST00000599687	PREX2	Q70Z35	1606 aa		13.87	□□□□□ -0.19
SNRNP70-208	ENST00000599687	ARHGEF40	Q8TER5	1519 aa		13.87	□□□□□ -0.19
SNRNP70-208	ENST00000599687	C14orf37	Q86TY3	774 aa		13.87	□□□□□ -0.19
SNRNP70-208	ENST00000599687	YEATS2	Q9ULM3	1422 aa		13.87	□□□□□ -0.19
SNRNP70-208	ENST00000599687	CDC42BPA	Q5VT25	1732 aa		13.87	□□□□□ -0.19
SNRNP70-208	ENST00000599687	CHRM1	P11229	460 aa	Predicted RBP	13.86	□□□□□ -0.19
SNRNP70-208	ENST00000599687	ADAMTSL3	P82987	1691 aa		13.85	□□□□□ -0.19
SNRNP70-208	ENST00000599687	ZFYVE16	Q7Z3T8	1539 aa		13.85	□□□□□ -0.19
SNRNP70-208	ENST00000599687	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.85	□□□□□ -0.19
SNRNP70-208	ENST00000599687	BCORL1	Q5H9F3	1711 aa		13.84	□□□□□ -0.19
SNRNP70-208	ENST00000599687	AFAP1	Q8N556	730 aa		13.84	□□□□□ -0.19
SNRNP70-208	ENST00000599687	MTUS2	Q5JR59	1369 aa		13.83	□□□□□ -0.19
SNRNP70-208	ENST00000599687	ZNF518A	Q6AHZ1	1483 aa		13.83	□□□□□ -0.2
SNRNP70-208	ENST00000599687	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.83	□□□□□ -0.2
SNRNP70-208	ENST00000599687	STK24	Q9Y6E0	443 aa		13.83	□□□□□ -0.2
SNRNP70-208	ENST00000599687	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.83	□□□□□ -0.2
SNRNP70-208	ENST00000599687	SIGLEC1	Q9BZZ2	1709 aa		13.82	□□□□□ -0.2
SNRNP70-208	ENST00000599687	ARHGEF12	Q9NZN5	1544 aa		13.82	□□□□□ -0.2
SNRNP70-208	ENST00000599687	DOK7	Q18PE1	504 aa		13.82	□□□□□ -0.2
SNRNP70-208	ENST00000599687	BOLA1	Q9Y3E2	137 aa		13.82	□□□□□ -0.2
SNRNP70-208	ENST00000599687	KDM5C	P41229	1560 aa		13.82	□□□□□ -0.2
SNRNP70-208	ENST00000599687	ERBB3	P21860	1342 aa		13.82	□□□□□ -0.2
SNRNP70-208	ENST00000599687	ABCC1	P33527	1531 aa		13.81	□□□□□ -0.2
SNRNP70-208	ENST00000599687	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.81	□□□□□ -0.2
SNRNP70-208	ENST00000599687	PDAP1	Q13442	181 aa	Known RBP	13.81	□□□□□ -0.2
SNRNP70-208	ENST00000599687	ZFP91	Q96JP5	570 aa	Predicted RBP	13.81	□□□□□ -0.2
SNRNP70-208	ENST00000599687	ATP10A	O60312	1499 aa		13.8	□□□□□ -0.2
SNRNP70-208	ENST00000599687	ITSN2	Q9NZM3	1697 aa		13.8	□□□□□ -0.2
SNRNP70-208	ENST00000599687	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.8	□□□□□ -0.2
SNRNP70-208	ENST00000599687	TRAPPC8	Q9Y2L5	1435 aa		13.8	□□□□□ -0.2
SNRNP70-208	ENST00000599687	RIMBP2	O15034	1052 aa		13.79	□□□□□ -0.2
SNRNP70-208	ENST00000599687	HOXB1	P14653	301 aa	Predicted RBP	13.79	□□□□□ -0.2
SNRNP70-208	ENST00000599687	RNF166	Q96A37	237 aa	Predicted RBP	13.79	□□□□□ -0.2
SNRNP70-208	ENST00000599687	CCNB3	Q8WWL7	1395 aa		13.79	□□□□□ -0.2
SNRNP70-208	ENST00000599687	VPS8	Q8N3P4	1428 aa		13.79	□□□□□ -0.2
SNRNP70-208	ENST00000599687	PTPRM	P28827	1452 aa		13.79	□□□□□ -0.2
SNRNP70-208	ENST00000599687	EHBP1L1	Q8N3D4	1523 aa		13.79	□□□□□ -0.2
SNRNP70-208	ENST00000599687	SAMD9L	Q8IVG5	1584 aa		13.79	□□□□□ -0.2
SNRNP70-208	ENST00000599687	MADD	Q8WXG6	1647 aa		13.79	□□□□□ -0.2
SNRNP70-208	ENST00000599687	ILDR1	Q86SU0	546 aa	Predicted RBP	13.78	□□□□□ -0.2
SNRNP70-208	ENST00000599687	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.78	□□□□□ -0.2
SNRNP70-208	ENST00000599687	MLH3	Q9UHC1	1453 aa		13.78	□□□□□ -0.2
SNRNP70-208	ENST00000599687	HECW2	Q9P2P5	1572 aa		13.78	□□□□□ -0.2
SNRNP70-208	ENST00000599687	C9orf84	Q5VXU9	1444 aa		13.77	□□□□□ -0.21
SNRNP70-208	ENST00000599687	LMOD2	Q6P5Q4	547 aa		13.77	□□□□□ -0.21
SNRNP70-208	ENST00000599687	RYDEN	Q9NUL5	291 aa	Known RBP	13.77	□□□□□ -0.21
SNRNP70-208	ENST00000599687	MYT1L	Q9UL68	1186 aa		13.77	□□□□□ -0.21
SNRNP70-208	ENST00000599687	HOXB3	P14651	431 aa	Predicted RBP	13.76	□□□□□ -0.21
SNRNP70-208	ENST00000599687	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
SNRNP70-208	ENST00000599687	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
SNRNP70-208	ENST00000599687	HOMEZ	Q8IX15	550 aa		13.76	□□□□□ -0.21
SNRNP70-208	ENST00000599687	TIAM1	Q13009	1591 aa		13.75	□□□□□ -0.21
SNRNP70-208	ENST00000599687	DIP2C	Q9Y2E4	1556 aa		13.75	□□□□□ -0.21
SNRNP70-208	ENST00000599687	MLEC	Q14165	292 aa		13.75	□□□□□ -0.21
SNRNP70-208	ENST00000599687	KCNV2	Q8TDN2	545 aa		13.75	□□□□□ -0.21
SNRNP70-208	ENST00000599687	KIAA1107	Q9UPP5	1409 aa		13.74	□□□□□ -0.21
SNRNP70-208	ENST00000599687	DPY19L2	Q6NUT2	758 aa		13.74	□□□□□ -0.21
SNRNP70-208	ENST00000599687	RIMS1	Q86UR5	1692 aa	Known RBP	13.74	□□□□□ -0.21
SNRNP70-208	ENST00000599687	ABCA6	Q8N139	1617 aa		13.74	□□□□□ -0.21
SNRNP70-208	ENST00000599687	SYCP2	Q9BX26	1530 aa		13.74	□□□□□ -0.21
SNRNP70-208	ENST00000599687	KIDINS220	Q9ULH0	1771 aa		13.73	□□□□□ -0.21
SNRNP70-208	ENST00000599687	CABP2	Q9NPB3	220 aa		13.73	□□□□□ -0.21
SNRNP70-208	ENST00000599687	PLEKHH2	Q8IVE3	1493 aa		13.73	□□□□□ -0.21
SNRNP70-208	ENST00000599687	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.73	□□□□□ -0.21
SNRNP70-208	ENST00000599687	ZNF644	Q9H582	1327 aa	Predicted RBP	13.72	□□□□□ -0.21
SNRNP70-208	ENST00000599687	RERE	Q9P2R6	1566 aa		13.72	□□□□□ -0.21
SNRNP70-208	ENST00000599687	CADPS2	Q86UW7	1296 aa		13.72	□□□□□ -0.21
SNRNP70-208	ENST00000599687	NCOA2	Q15596	1464 aa		13.72	□□□□□ -0.21
SNRNP70-208	ENST00000599687	MAP3K1	Q13233	1512 aa		13.71	□□□□□ -0.21
SNRNP70-208	ENST00000599687	LRRC9	Q6ZRR7	1453 aa		13.71	□□□□□ -0.21
SNRNP70-208	ENST00000599687	SPAG9	O60271	1321 aa	Known RBP	13.7	□□□□□ -0.22
SNRNP70-208	ENST00000599687	KANK4	Q5T7N3	995 aa	Predicted RBP	13.7	□□□□□ -0.22
SNRNP70-208	ENST00000599687	FER1L4	A9Z1Z3	1794 aa		13.7	□□□□□ -0.22
SNRNP70-208	ENST00000599687	BRPF1	P55201	1214 aa	Predicted RBP	13.69	□□□□□ -0.22
SNRNP70-208	ENST00000599687	AGL	P35573	1532 aa		13.69	□□□□□ -0.22
SNRNP70-208	ENST00000599687	MBD5	Q9P267	1494 aa		13.68	□□□□□ -0.22
SNRNP70-208	ENST00000599687	ATP7A	Q04656	1500 aa		13.67	□□□□□ -0.22
SNRNP70-208	ENST00000599687	INO80	Q9ULG1	1556 aa	Predicted RBP	13.66	□□□□□ -0.22
SNRNP70-208	ENST00000599687	VARS2	Q5ST30	1063 aa	Known RBP	13.66	□□□□□ -0.22
SNRNP70-208	ENST00000599687	WDR70	Q9NW82	654 aa		13.66	□□□□□ -0.22
SNRNP70-208	ENST00000599687	CAMSAP2	Q08AD1	1489 aa		13.64	□□□□□ -0.23
SNRNP70-208	ENST00000599687	PTGER2	P43116	358 aa		13.64	□□□□□ -0.23
SNRNP70-208	ENST00000599687	CEBPA	P49715	358 aa	Predicted RBP	13.63	□□□□□ -0.23
SNRNP70-208	ENST00000599687	RSPH4A	Q5TD94	716 aa		13.63	□□□□□ -0.23
SNRNP70-208	ENST00000599687	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.63	□□□□□ -0.23
SNRNP70-208	ENST00000599687	LMTK3	Q96Q04	1460 aa		13.62	□□□□□ -0.23
SNRNP70-208	ENST00000599687	A2M	P01023	1474 aa		13.61	□□□□□ -0.23
SNRNP70-208	ENST00000599687	ZSWIM6	Q9HCJ5	1215 aa		13.61	□□□□□ -0.23
SNRNP70-208	ENST00000599687	PLXNC1	O60486	1568 aa		13.61	□□□□□ -0.23
SNRNP70-208	ENST00000599687	CCDC141	Q6ZP82	1450 aa		13.61	□□□□□ -0.23
SNRNP70-208	ENST00000599687	ADGB	Q8N7X0	1667 aa		13.6	□□□□□ -0.23
SNRNP70-208	ENST00000599687	ARHGEF5	Q12774	1597 aa		13.59	□□□□□ -0.23
SNRNP70-208	ENST00000599687	MYOM3	Q5VTT5	1437 aa		13.59	□□□□□ -0.23
SNRNP70-208	ENST00000599687	MIA2	Q96PC5	1412 aa		13.59	□□□□□ -0.23
SNRNP70-208	ENST00000599687	ESF1	Q9H501	851 aa	Known RBP	13.59	□□□□□ -0.23
SNRNP70-208	ENST00000599687	C3	P01024	1663 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms