RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 DMRT2Q9Y5R5 561 aa15.96■□□□□ 0.15
USHBP1-207ENST00000597928 ITPRIPQ8IWB1 547 aa15.96■□□□□ 0.14
USHBP1-207ENST00000597928 TARBP1Q13395 1621 aaKnown RBP15.95■□□□□ 0.14
USHBP1-207ENST00000597928 TPRNQ4KMQ1 711 aa15.95■□□□□ 0.14
USHBP1-207ENST00000597928 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
USHBP1-207ENST00000597928 MAPK8IP3Q9UPT6 1336 aa15.95■□□□□ 0.14
USHBP1-207ENST00000597928 MFAP1P55081 439 aaKnown RBP15.94■□□□□ 0.14
USHBP1-207ENST00000597928 TCP11L2Q8N4U5 519 aa15.94■□□□□ 0.14
USHBP1-207ENST00000597928 RAPGEF3O95398 923 aa15.93■□□□□ 0.14
USHBP1-207ENST00000597928 CENPQQ7L2Z9 268 aaPredicted RBP15.93■□□□□ 0.14
USHBP1-207ENST00000597928 SMC4Q9NTJ3 1288 aa15.93■□□□□ 0.14
USHBP1-207ENST00000597928 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
USHBP1-207ENST00000597928 DUSP27Q5VZP5 1158 aa15.93■□□□□ 0.14
USHBP1-207ENST00000597928 BRPF3Q9ULD4 1205 aa15.92■□□□□ 0.14
USHBP1-207ENST00000597928 FRAT2O75474 233 aaPredicted RBP15.91■□□□□ 0.14
USHBP1-207ENST00000597928 NFKBIBQ15653 356 aa15.91■□□□□ 0.14
USHBP1-207ENST00000597928 ANO8Q9HCE9 1232 aaPredicted RBP15.91■□□□□ 0.14
USHBP1-207ENST00000597928 DNMT1P26358 1616 aaKnown RBP15.91■□□□□ 0.14
USHBP1-207ENST00000597928 CCDC141Q6ZP82 1450 aa15.91■□□□□ 0.14
USHBP1-207ENST00000597928 ZBTB7CA1YPR0 619 aa15.91■□□□□ 0.14
USHBP1-207ENST00000597928 PLEKHH1Q9ULM0 1364 aa15.9■□□□□ 0.14
USHBP1-207ENST00000597928 PBRM1Q86U86 1689 aa15.9■□□□□ 0.14
USHBP1-207ENST00000597928 E9PSI1 815 aa15.88■□□□□ 0.13
USHBP1-207ENST00000597928 IGHDP01880 384 aa15.88■□□□□ 0.13
USHBP1-207ENST00000597928 ESF1Q9H501 851 aaKnown RBP15.88■□□□□ 0.13
USHBP1-207ENST00000597928 HMOX1P09601 288 aa15.88■□□□□ 0.13
USHBP1-207ENST00000597928 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
USHBP1-207ENST00000597928 PRAG1Q86YV5 1406 aa15.88■□□□□ 0.13
USHBP1-207ENST00000597928 SYCP2Q9BX26 1530 aa15.87■□□□□ 0.13
USHBP1-207ENST00000597928 SLFN5Q08AF3 891 aa15.87■□□□□ 0.13
USHBP1-207ENST00000597928 EIF4G3O43432 1585 aaKnown RBP15.87■□□□□ 0.13
USHBP1-207ENST00000597928 RALGAPBQ86X10 1494 aa15.87■□□□□ 0.13
USHBP1-207ENST00000597928 BCORL1Q5H9F3 1711 aa15.87■□□□□ 0.13
USHBP1-207ENST00000597928 CARD14Q9BXL6 1004 aa15.86■□□□□ 0.13
USHBP1-207ENST00000597928 MS4A1P11836 297 aa15.86■□□□□ 0.13
USHBP1-207ENST00000597928 GCC2Q8IWJ2 1684 aa15.85■□□□□ 0.13
USHBP1-207ENST00000597928 BECN1Q14457 450 aa15.85■□□□□ 0.13
USHBP1-207ENST00000597928 PARD3Q8TEW0 1356 aa15.84■□□□□ 0.13
USHBP1-207ENST00000597928 TRAPPC8Q9Y2L5 1435 aa15.84■□□□□ 0.13
USHBP1-207ENST00000597928 FAM135AQ9P2D6 1515 aa15.84■□□□□ 0.13
USHBP1-207ENST00000597928 EIF3AQ14152 1382 aaKnown RBP15.84■□□□□ 0.13
USHBP1-207ENST00000597928 CYB5RLQ6IPT4 315 aa15.84■□□□□ 0.13
USHBP1-207ENST00000597928 WWC1Q8IX03 1113 aa15.84■□□□□ 0.13
USHBP1-207ENST00000597928 C14orf37Q86TY3 774 aa15.83■□□□□ 0.12
USHBP1-207ENST00000597928 THUMPD2Q9BTF0 503 aaKnown RBP15.83■□□□□ 0.12
USHBP1-207ENST00000597928 CEP170Q5SW79 1584 aa15.83■□□□□ 0.12
USHBP1-207ENST00000597928 C1orf115Q9H7X2 142 aa15.82■□□□□ 0.12
USHBP1-207ENST00000597928 LRPPRCP42704 1394 aaKnown RBP15.81■□□□□ 0.12
USHBP1-207ENST00000597928 SEC24BO95487 1268 aa15.81■□□□□ 0.12
USHBP1-207ENST00000597928 EXOSC9Q06265 439 aaKnown RBP15.81■□□□□ 0.12
USHBP1-207ENST00000597928 A2MP01023 1474 aa15.81■□□□□ 0.12
USHBP1-207ENST00000597928 GSE1Q14687 1217 aa15.8■□□□□ 0.12
USHBP1-207ENST00000597928 RIPK4P57078 832 aa15.8■□□□□ 0.12
USHBP1-207ENST00000597928 RNF123Q5XPI4 1314 aa15.8■□□□□ 0.12
USHBP1-207ENST00000597928 RUNDC1Q96C34 613 aa15.8■□□□□ 0.12
USHBP1-207ENST00000597928 LNPKQ9C0E8 428 aa15.8■□□□□ 0.12
USHBP1-207ENST00000597928 PDZRN3Q9UPQ7 1066 aa15.79■□□□□ 0.12
USHBP1-207ENST00000597928 CGNL1Q0VF96 1302 aa15.79■□□□□ 0.12
USHBP1-207ENST00000597928 RWDD1Q9H446 243 aaPredicted RBP15.78■□□□□ 0.12
USHBP1-207ENST00000597928 NCLP19338 710 aaKnown RBP15.77■□□□□ 0.12
USHBP1-207ENST00000597928 MYH16Q9H6N6 1097 aa15.77■□□□□ 0.12
USHBP1-207ENST00000597928 RLBP1P12271 317 aa15.77■□□□□ 0.12
USHBP1-207ENST00000597928 NSD3Q9BZ95 1437 aa15.76■□□□□ 0.11
USHBP1-207ENST00000597928 PRAM1Q96QH2 718 aa15.76■□□□□ 0.11
USHBP1-207ENST00000597928 ZKSCAN2Q63HK3 967 aa15.74■□□□□ 0.11
USHBP1-207ENST00000597928 DZIP1LQ8IYY4 767 aaKnown RBP15.74■□□□□ 0.11
USHBP1-207ENST00000597928 PCDHB15Q9Y5E8 787 aa15.74■□□□□ 0.11
USHBP1-207ENST00000597928 ANKRD45Q5TZF3 282 aa15.74■□□□□ 0.11
USHBP1-207ENST00000597928 EVC2Q86UK5 1308 aa15.74■□□□□ 0.11
USHBP1-207ENST00000597928 CFAP65Q6ZU64 1925 aaKnown RBP15.74■□□□□ 0.11
USHBP1-207ENST00000597928 FBXO31Q5XUX0 539 aaPredicted RBP15.74■□□□□ 0.11
USHBP1-207ENST00000597928 MBD5Q9P267 1494 aa15.73■□□□□ 0.11
USHBP1-207ENST00000597928 NECTIN2Q92692 538 aa15.73■□□□□ 0.11
USHBP1-207ENST00000597928 HDGFL2Q7Z4V5 671 aaPredicted RBP15.73■□□□□ 0.11
USHBP1-207ENST00000597928 CABP1Q9NZU7 370 aa15.73■□□□□ 0.11
USHBP1-207ENST00000597928 KDM5CP41229 1560 aa15.73■□□□□ 0.11
USHBP1-207ENST00000597928 WAPLQ7Z5K2 1190 aa15.72■□□□□ 0.11
USHBP1-207ENST00000597928 PMFBP1Q8TBY8 1022 aa15.72■□□□□ 0.11
USHBP1-207ENST00000597928 PLA2R1Q13018 1463 aa15.72■□□□□ 0.11
USHBP1-207ENST00000597928 UHRF1BP1Q6BDS2 1440 aa15.72■□□□□ 0.11
USHBP1-207ENST00000597928 HSP90AB1P08238 724 aaKnown RBP15.72■□□□□ 0.11
USHBP1-207ENST00000597928 C8orf34Q49A92 452 aa15.72■□□□□ 0.11
USHBP1-207ENST00000597928 ZNF428Q96B54 188 aa15.72■□□□□ 0.11
USHBP1-207ENST00000597928 FOXD4L5Q5VV16 416 aaPredicted RBP15.72■□□□□ 0.11
USHBP1-207ENST00000597928 FOXD4L4Q8WXT5 416 aaPredicted RBP15.72■□□□□ 0.11
USHBP1-207ENST00000597928 RARSP54136 660 aaKnown RBP15.71■□□□□ 0.11
USHBP1-207ENST00000597928 NOB1Q9ULX3 412 aaKnown RBP15.71■□□□□ 0.11
USHBP1-207ENST00000597928 VGFO15240 615 aaPredicted RBP15.71■□□□□ 0.11
USHBP1-207ENST00000597928 MAGI2Q86UL8 1455 aa15.7■□□□□ 0.1
USHBP1-207ENST00000597928 ADGRL2O95490 1459 aa15.7■□□□□ 0.1
USHBP1-207ENST00000597928 DCTN1Q14203 1278 aa15.7■□□□□ 0.1
USHBP1-207ENST00000597928 NOL8Q76FK4 1167 aaKnown RBP15.7■□□□□ 0.1
USHBP1-207ENST00000597928 NOS1P29475 1434 aa15.7■□□□□ 0.1
USHBP1-207ENST00000597928 SLC4A10Q6U841 1118 aa15.7■□□□□ 0.1
USHBP1-207ENST00000597928 ABCC10Q5T3U5 1492 aa15.69■□□□□ 0.1
USHBP1-207ENST00000597928 ITSN2Q9NZM3 1697 aa15.69■□□□□ 0.1
USHBP1-207ENST00000597928 TERF2IPQ9NYB0 399 aa15.69■□□□□ 0.1
USHBP1-207ENST00000597928 NUP160Q12769 1436 aa15.69■□□□□ 0.1
USHBP1-207ENST00000597928 PRKAR2BP31323 418 aa15.69■□□□□ 0.1
USHBP1-207ENST00000597928 LTV1Q96GA3 475 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms