RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-208	ENST00000596365	SRCAP	Q6ZRS2	3230 aa		13.74	□□□□□ -0.21
LINC00649-208	ENST00000596365	TSPY4	P0CV99	314 aa		13.74	□□□□□ -0.21
LINC00649-208	ENST00000596365	TSPY10	P0CW01	314 aa		13.74	□□□□□ -0.21
LINC00649-208	ENST00000596365	ZNF772	Q68DY9	489 aa	Predicted RBP	13.74	□□□□□ -0.21
LINC00649-208	ENST00000596365	PROSER2	Q86WR7	435 aa	Predicted RBP	13.74	□□□□□ -0.21
LINC00649-208	ENST00000596365	KCNA6	P17658	529 aa		13.73	□□□□□ -0.21
LINC00649-208	ENST00000596365	MROH1	Q8NDA8	1641 aa		13.72	□□□□□ -0.21
LINC00649-208	ENST00000596365	TRIM52	Q96A61	297 aa		13.72	□□□□□ -0.21
LINC00649-208	ENST00000596365	PIK3C2B	O00750	1634 aa		13.72	□□□□□ -0.21
LINC00649-208	ENST00000596365	COL16A1	Q07092	1604 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC00649-208	ENST00000596365	PRDM15	P57071	1507 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC00649-208	ENST00000596365	MEX3C	Q5U5Q3	659 aa	Known RBP	13.71	□□□□□ -0.21
LINC00649-208	ENST00000596365	NKTR	P30414	1462 aa	Known RBP	13.71	□□□□□ -0.21
LINC00649-208	ENST00000596365	KDM5A	P29375	1690 aa	Known RBP	13.71	□□□□□ -0.21
LINC00649-208	ENST00000596365	MSH6	P52701	1360 aa		13.71	□□□□□ -0.22
LINC00649-208	ENST00000596365	TMEM2	Q9UHN6	1383 aa		13.71	□□□□□ -0.22
LINC00649-208	ENST00000596365	SPATA31A6	Q5VVP1	1343 aa		13.7	□□□□□ -0.22
LINC00649-208	ENST00000596365	SLAIN2	Q9P270	581 aa		13.7	□□□□□ -0.22
LINC00649-208	ENST00000596365	MAST1	Q9Y2H9	1570 aa		13.7	□□□□□ -0.22
LINC00649-208	ENST00000596365	NWD1	Q149M9	1564 aa		13.69	□□□□□ -0.22
LINC00649-208	ENST00000596365	TET3	O43151	1660 aa		13.69	□□□□□ -0.22
LINC00649-208	ENST00000596365	LRP6	O75581	1613 aa		13.68	□□□□□ -0.22
LINC00649-208	ENST00000596365	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.68	□□□□□ -0.22
LINC00649-208	ENST00000596365	ARHGAP31	Q2M1Z3	1444 aa		13.68	□□□□□ -0.22
LINC00649-208	ENST00000596365	FGD6	Q6ZV73	1430 aa		13.68	□□□□□ -0.22
LINC00649-208	ENST00000596365	RBM33	Q96EV2	1170 aa	Known RBP	13.68	□□□□□ -0.22
LINC00649-208	ENST00000596365	SHPRH	Q149N8	1683 aa		13.68	□□□□□ -0.22
LINC00649-208	ENST00000596365	RXRB	P28702	533 aa		13.67	□□□□□ -0.22
LINC00649-208	ENST00000596365	STAG3	Q9UJ98	1225 aa		13.67	□□□□□ -0.22
LINC00649-208	ENST00000596365	EFCAB6	Q5THR3	1501 aa		13.66	□□□□□ -0.22
LINC00649-208	ENST00000596365	SLC26A8	Q96RN1	970 aa		13.65	□□□□□ -0.22
LINC00649-208	ENST00000596365	CHD2	O14647	1828 aa	Known RBP	13.64	□□□□□ -0.23
LINC00649-208	ENST00000596365	DUOX2	Q9NRD8	1548 aa		13.63	□□□□□ -0.23
LINC00649-208	ENST00000596365	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.62	□□□□□ -0.23
LINC00649-208	ENST00000596365	NCOA3	Q9Y6Q9	1424 aa		13.59	□□□□□ -0.23
LINC00649-208	ENST00000596365	AKT1S1	Q96B36	256 aa		13.59	□□□□□ -0.23
LINC00649-208	ENST00000596365	BCAN	Q96GW7	911 aa		13.59	□□□□□ -0.23
LINC00649-208	ENST00000596365	IDI1	Q13907	227 aa		13.58	□□□□□ -0.24
LINC00649-208	ENST00000596365	ADGRB3	O60242	1522 aa		13.58	□□□□□ -0.24
LINC00649-208	ENST00000596365	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.57	□□□□□ -0.24
LINC00649-208	ENST00000596365	SPDYE2B	A6NHP3	402 aa		13.57	□□□□□ -0.24
LINC00649-208	ENST00000596365	SPDYE6	P0CI01	402 aa		13.57	□□□□□ -0.24
LINC00649-208	ENST00000596365	SPDYE2	Q495Y8	402 aa		13.57	□□□□□ -0.24
LINC00649-208	ENST00000596365	AFF2	P51816	1311 aa		13.57	□□□□□ -0.24
LINC00649-208	ENST00000596365	KANK1	Q14678	1352 aa		13.57	□□□□□ -0.24
LINC00649-208	ENST00000596365	ERBIN	Q96RT1	1412 aa		13.56	□□□□□ -0.24
LINC00649-208	ENST00000596365	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.56	□□□□□ -0.24
LINC00649-208	ENST00000596365	NUTM2E	B1AL46	878 aa	Predicted RBP	13.56	□□□□□ -0.24
LINC00649-208	ENST00000596365	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.56	□□□□□ -0.24
LINC00649-208	ENST00000596365	DIP2A	Q14689	1571 aa		13.56	□□□□□ -0.24
LINC00649-208	ENST00000596365	C14orf37	Q86TY3	774 aa		13.55	□□□□□ -0.24
LINC00649-208	ENST00000596365	CADPS2	Q86UW7	1296 aa		13.55	□□□□□ -0.24
LINC00649-208	ENST00000596365	RGS12	O14924	1447 aa		13.55	□□□□□ -0.24
LINC00649-208	ENST00000596365	ATF3	P18847	181 aa		13.54	□□□□□ -0.24
LINC00649-208	ENST00000596365	RBM6	P78332	1123 aa	Known RBP	13.54	□□□□□ -0.24
LINC00649-208	ENST00000596365	MYO5B	Q9ULV0	1848 aa		13.54	□□□□□ -0.24
LINC00649-208	ENST00000596365	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.53	□□□□□ -0.24
LINC00649-208	ENST00000596365	KIF15	Q9NS87	1388 aa		13.53	□□□□□ -0.24
LINC00649-208	ENST00000596365	PLEKHG1	Q9ULL1	1385 aa		13.53	□□□□□ -0.24
LINC00649-208	ENST00000596365	LMTK2	Q8IWU2	1503 aa		13.53	□□□□□ -0.24
LINC00649-208	ENST00000596365	C19orf44	Q9H6X5	657 aa		13.52	□□□□□ -0.25
LINC00649-208	ENST00000596365	QTRT2	Q9H974	415 aa	Known RBP	13.52	□□□□□ -0.25
LINC00649-208	ENST00000596365	ZRANB1	Q9UGI0	708 aa		13.52	□□□□□ -0.25
LINC00649-208	ENST00000596365	MYOM3	Q5VTT5	1437 aa		13.52	□□□□□ -0.25
LINC00649-208	ENST00000596365	CROCC2	H7BZ55	1655 aa		13.52	□□□□□ -0.25
LINC00649-208	ENST00000596365	NOS1	P29475	1434 aa		13.51	□□□□□ -0.25
LINC00649-208	ENST00000596365	ATAD2	Q6PL18	1390 aa		13.51	□□□□□ -0.25
LINC00649-208	ENST00000596365	HDGF	P51858	240 aa	Known RBP	13.51	□□□□□ -0.25
LINC00649-208	ENST00000596365	SLC52A1	Q9NWF4	448 aa		13.51	□□□□□ -0.25
LINC00649-208	ENST00000596365	ZFYVE9	O95405	1425 aa		13.5	□□□□□ -0.25
LINC00649-208	ENST00000596365	PPP1R15A	O75807	674 aa	Predicted RBP	13.5	□□□□□ -0.25
LINC00649-208	ENST00000596365	TBX22	Q9Y458	520 aa		13.5	□□□□□ -0.25
LINC00649-208	ENST00000596365	BRINP3	Q76B58	766 aa		13.49	□□□□□ -0.25
LINC00649-208	ENST00000596365	ZNF692	Q9BU19	519 aa	Predicted RBP	13.49	□□□□□ -0.25
LINC00649-208	ENST00000596365	RRP7BP	Q9NSQ0	103 aa		13.49	□□□□□ -0.25
LINC00649-208	ENST00000596365	GCC2	Q8IWJ2	1684 aa		13.49	□□□□□ -0.25
LINC00649-208	ENST00000596365	NHSL1	Q5SYE7	1610 aa		13.49	□□□□□ -0.25
LINC00649-208	ENST00000596365	SETD5	Q9C0A6	1442 aa		13.48	□□□□□ -0.25
LINC00649-208	ENST00000596365	NGLY1	Q96IV0	654 aa		13.48	□□□□□ -0.25
LINC00649-208	ENST00000596365	EP400	Q96L91	3159 aa		13.48	□□□□□ -0.25
LINC00649-208	ENST00000596365	RIMS2	Q9UQ26	1411 aa		13.47	□□□□□ -0.25
LINC00649-208	ENST00000596365	SETBP1	Q9Y6X0	1596 aa		13.47	□□□□□ -0.25
LINC00649-208	ENST00000596365	REM2	Q8IYK8	340 aa	Predicted RBP	13.47	□□□□□ -0.25
LINC00649-208	ENST00000596365	C8orf37	Q96NL8	207 aa		13.47	□□□□□ -0.25
LINC00649-208	ENST00000596365	ASXL1	Q8IXJ9	1541 aa		13.47	□□□□□ -0.25
LINC00649-208	ENST00000596365	PIK3R4	Q99570	1358 aa		13.46	□□□□□ -0.25
LINC00649-208	ENST00000596365	LRRC59	Q96AG4	307 aa	Known RBP	13.46	□□□□□ -0.25
LINC00649-208	ENST00000596365	TMEM131L	A2VDJ0	1609 aa		13.45	□□□□□ -0.26
LINC00649-208	ENST00000596365	DCC	P43146	1447 aa		13.45	□□□□□ -0.26
LINC00649-208	ENST00000596365	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
LINC00649-208	ENST00000596365	RPRD2	Q5VT52	1461 aa	Known RBP	13.43	□□□□□ -0.26
LINC00649-208	ENST00000596365	ABCC5	O15440	1437 aa		13.43	□□□□□ -0.26
LINC00649-208	ENST00000596365	SSUH2	Q9Y2M2	353 aa		13.43	□□□□□ -0.26
LINC00649-208	ENST00000596365	ADAMTS13	Q76LX8	1427 aa		13.42	□□□□□ -0.26
LINC00649-208	ENST00000596365	CCDC125	Q86Z20	511 aa		13.42	□□□□□ -0.26
LINC00649-208	ENST00000596365	TRPM2	O94759	1503 aa		13.42	□□□□□ -0.26
LINC00649-208	ENST00000596365	PNPLA6	Q8IY17	1366 aa		13.42	□□□□□ -0.26
LINC00649-208	ENST00000596365	MST1R	Q04912	1400 aa		13.39	□□□□□ -0.27
LINC00649-208	ENST00000596365	PTPN23	Q9H3S7	1636 aa		13.39	□□□□□ -0.27
LINC00649-208	ENST00000596365	TRPC5	Q9UL62	973 aa	Predicted RBP	13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms