RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 SAMD9LQ8IVG5 1584 aa13.32□□□□□ -0.28
DNMT1-224ENST00000591764 ZNF777Q9ULD5 760 aaPredicted RBP13.32□□□□□ -0.28
DNMT1-224ENST00000591764 SYCP2Q9BX26 1530 aa13.32□□□□□ -0.28
DNMT1-224ENST00000591764 SPAG9O60271 1321 aaKnown RBP13.32□□□□□ -0.28
DNMT1-224ENST00000591764 DPY19L2Q6NUT2 758 aa13.31□□□□□ -0.28
DNMT1-224ENST00000591764 RNF25Q96BH1 459 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-224ENST00000591764 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.31□□□□□ -0.28
DNMT1-224ENST00000591764 SPATA31D1Q6ZQQ2 1576 aa13.31□□□□□ -0.28
DNMT1-224ENST00000591764 CAMSAP1Q5T5Y3 1602 aa13.3□□□□□ -0.28
DNMT1-224ENST00000591764 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
DNMT1-224ENST00000591764 SUPT6HQ7KZ85 1726 aaKnown RBP13.29□□□□□ -0.28
DNMT1-224ENST00000591764 KIAA1107Q9UPP5 1409 aa13.29□□□□□ -0.28
DNMT1-224ENST00000591764 CFDP1Q9UEE9 299 aaPredicted RBP13.28□□□□□ -0.28
DNMT1-224ENST00000591764 ZMYM3Q14202 1370 aa13.28□□□□□ -0.28
DNMT1-224ENST00000591764 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
DNMT1-224ENST00000591764 LTBP4Q8N2S1 1624 aa13.28□□□□□ -0.28
DNMT1-224ENST00000591764 SOCS7O14512 581 aa13.27□□□□□ -0.29
DNMT1-224ENST00000591764 PKD2Q13563 968 aa13.27□□□□□ -0.29
DNMT1-224ENST00000591764 A2MP01023 1474 aa13.27□□□□□ -0.29
DNMT1-224ENST00000591764 GPATCH8Q9UKJ3 1502 aaKnown RBP13.27□□□□□ -0.29
DNMT1-224ENST00000591764 ZNF142P52746 1687 aaPredicted RBP13.27□□□□□ -0.29
DNMT1-224ENST00000591764 ST18O60284 1047 aa13.26□□□□□ -0.29
DNMT1-224ENST00000591764 PLXNC1O60486 1568 aa13.26□□□□□ -0.29
DNMT1-224ENST00000591764 CLTCQ00610 1675 aaKnown RBP13.26□□□□□ -0.29
DNMT1-224ENST00000591764 PLA2R1Q13018 1463 aa13.26□□□□□ -0.29
DNMT1-224ENST00000591764 MYO3AQ8NEV4 1616 aa13.26□□□□□ -0.29
DNMT1-224ENST00000591764 L3MBTL3Q96JM7 780 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-224ENST00000591764 INO80Q9ULG1 1556 aaPredicted RBP13.26□□□□□ -0.29
DNMT1-224ENST00000591764 ADGBQ8N7X0 1667 aa13.25□□□□□ -0.29
DNMT1-224ENST00000591764 MTUS2Q5JR59 1369 aa13.25□□□□□ -0.29
DNMT1-224ENST00000591764 HNRNPMP52272 730 aaKnown RBP eCLIP13.24□□□□□ -0.29
DNMT1-224ENST00000591764 EFCAB3Q8N7B9 438 aa13.24□□□□□ -0.29
DNMT1-224ENST00000591764 CEP170BQ9Y4F5 1589 aaPredicted RBP13.24□□□□□ -0.29
DNMT1-224ENST00000591764 RIOK3O14730 519 aaKnown RBP13.23□□□□□ -0.29
DNMT1-224ENST00000591764 C3orf67Q6ZVT6 689 aa13.23□□□□□ -0.29
DNMT1-224ENST00000591764 GGT6Q6P531 493 aa13.22□□□□□ -0.29
DNMT1-224ENST00000591764 ILDR2Q71H61 639 aa13.21□□□□□ -0.29
DNMT1-224ENST00000591764 PTPRKQ15262 1439 aa13.21□□□□□ -0.3
DNMT1-224ENST00000591764 NCKAP5LQ9HCH0 1330 aa13.2□□□□□ -0.3
DNMT1-224ENST00000591764 UBAP1LF5GYI3 381 aa13.2□□□□□ -0.3
DNMT1-224ENST00000591764 TCOF1Q13428 1488 aaKnown RBP13.2□□□□□ -0.3
DNMT1-224ENST00000591764 EHBP1L1Q8N3D4 1523 aa13.19□□□□□ -0.3
DNMT1-224ENST00000591764 ZNF335Q9H4Z2 1342 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-224ENST00000591764 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-224ENST00000591764 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-224ENST00000591764 FAM135AQ9P2D6 1515 aa13.18□□□□□ -0.3
DNMT1-224ENST00000591764 PCDH10Q9P2E7 1040 aa13.18□□□□□ -0.3
DNMT1-224ENST00000591764 RTEL1-TNFRSF6BF6WH68 1400 aa13.18□□□□□ -0.3
DNMT1-224ENST00000591764 A2ML1A8K2U0 1454 aa13.17□□□□□ -0.3
DNMT1-224ENST00000591764 TIAM1Q13009 1591 aa13.17□□□□□ -0.3
DNMT1-224ENST00000591764 VGFO15240 615 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-224ENST00000591764 BOLA1Q9Y3E2 137 aa13.15□□□□□ -0.3
DNMT1-224ENST00000591764 POLR1AO95602 1720 aaPredicted RBP13.15□□□□□ -0.3
DNMT1-224ENST00000591764 CEP162Q5TB80 1403 aa13.14□□□□□ -0.31
DNMT1-224ENST00000591764 KDM5DQ9BY66 1539 aa13.14□□□□□ -0.31
DNMT1-224ENST00000591764 DNMT1P26358 1616 aaKnown RBP13.14□□□□□ -0.31
DNMT1-224ENST00000591764 DHX29Q7Z478 1369 aaKnown RBP13.14□□□□□ -0.31
DNMT1-224ENST00000591764 CCDC141Q6ZP82 1450 aa13.14□□□□□ -0.31
DNMT1-224ENST00000591764 CPS1P31327 1500 aa13.13□□□□□ -0.31
DNMT1-224ENST00000591764 MBD5Q9P267 1494 aa13.13□□□□□ -0.31
DNMT1-224ENST00000591764 TNRQ92752 1358 aa13.13□□□□□ -0.31
DNMT1-224ENST00000591764 RSPH4AQ5TD94 716 aa13.13□□□□□ -0.31
DNMT1-224ENST00000591764 PZPP20742 1482 aa13.12□□□□□ -0.31
DNMT1-224ENST00000591764 SNPHO15079 494 aa13.12□□□□□ -0.31
DNMT1-224ENST00000591764 TOM1O60784 492 aa13.12□□□□□ -0.31
DNMT1-224ENST00000591764 KIF3BO15066 747 aa13.11□□□□□ -0.31
DNMT1-224ENST00000591764 WASHC2CQ9Y4E1 1318 aa13.11□□□□□ -0.31
DNMT1-224ENST00000591764 CDAN1Q8IWY9 1227 aa13.1□□□□□ -0.31
DNMT1-224ENST00000591764 ZNF644Q9H582 1327 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-224ENST00000591764 NLRP1Q9C000 1473 aa13.1□□□□□ -0.31
DNMT1-224ENST00000591764 G3V3G9 751 aa13.09□□□□□ -0.31
DNMT1-224ENST00000591764 ANKLE2Q86XL3 938 aa13.09□□□□□ -0.31
DNMT1-224ENST00000591764 CAMSAP2Q08AD1 1489 aa13.09□□□□□ -0.31
DNMT1-224ENST00000591764 TSPY4P0CV99 314 aa13.08□□□□□ -0.32
DNMT1-224ENST00000591764 TSPY10P0CW01 314 aa13.08□□□□□ -0.32
DNMT1-224ENST00000591764 THEMISQ8N1K5 641 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-224ENST00000591764 MARVELD3Q96A59 401 aa13.08□□□□□ -0.32
DNMT1-224ENST00000591764 MS4A4AQ96JQ5 239 aa13.08□□□□□ -0.32
DNMT1-224ENST00000591764 TMEM121BQ9BXQ6 578 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-224ENST00000591764 SHANK2Q9UPX8 1470 aa13.08□□□□□ -0.32
DNMT1-224ENST00000591764 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
DNMT1-224ENST00000591764 NEURL4Q96JN8 1562 aa13.07□□□□□ -0.32
DNMT1-224ENST00000591764 UGGT1Q9NYU2 1555 aa13.07□□□□□ -0.32
DNMT1-224ENST00000591764 NCOA2Q15596 1464 aa13.06□□□□□ -0.32
DNMT1-224ENST00000591764 ECM2O94769 699 aaPredicted RBP13.06□□□□□ -0.32
DNMT1-224ENST00000591764 PIP4K2BP78356 416 aa13.06□□□□□ -0.32
DNMT1-224ENST00000591764 DEPDC5O75140 1603 aa13.06□□□□□ -0.32
DNMT1-224ENST00000591764 ZC3H13Q5T200 1668 aaKnown RBP13.05□□□□□ -0.32
DNMT1-224ENST00000591764 MIA2Q96PC5 1412 aa13.05□□□□□ -0.32
DNMT1-224ENST00000591764 SOX12O15370 315 aa13.05□□□□□ -0.32
DNMT1-224ENST00000591764 ARHGEF5Q12774 1597 aa13.05□□□□□ -0.32
DNMT1-224ENST00000591764 MED1Q15648 1581 aaPredicted RBP13.04□□□□□ -0.32
DNMT1-224ENST00000591764 FBXO31Q5XUX0 539 aaPredicted RBP13.04□□□□□ -0.32
DNMT1-224ENST00000591764 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.04□□□□□ -0.32
DNMT1-224ENST00000591764 NPHP4O75161 1426 aaPredicted RBP13.04□□□□□ -0.32
DNMT1-224ENST00000591764 IQGAP1P46940 1657 aa13.03□□□□□ -0.32
DNMT1-224ENST00000591764 HSPA1LP34931 641 aa13.03□□□□□ -0.32
DNMT1-224ENST00000591764 BCL11BQ9C0K0 894 aaPredicted RBP13.03□□□□□ -0.32
DNMT1-224ENST00000591764 MED14O60244 1454 aa13.03□□□□□ -0.32
DNMT1-224ENST00000591764 RNF17Q9BXT8 1623 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms