RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 PLIN1O60240 522 aa15.64■□□□□ 0.09
SMARCA4-217ENST00000591595 ITSN2Q9NZM3 1697 aa15.64■□□□□ 0.09
SMARCA4-217ENST00000591595 UHRF1BP1Q6BDS2 1440 aa15.64■□□□□ 0.09
SMARCA4-217ENST00000591595 FAM13BQ9NYF5 915 aa15.64■□□□□ 0.09
SMARCA4-217ENST00000591595 LRPPRCP42704 1394 aaKnown RBP15.63■□□□□ 0.09
SMARCA4-217ENST00000591595 CHRM1P11229 460 aaPredicted RBP15.63■□□□□ 0.09
SMARCA4-217ENST00000591595 TNNT2P45379 298 aaPredicted RBP15.63■□□□□ 0.09
SMARCA4-217ENST00000591595 ERBB4Q15303 1308 aa15.63■□□□□ 0.09
SMARCA4-217ENST00000591595 PDE3BQ13370 1112 aa15.62■□□□□ 0.09
SMARCA4-217ENST00000591595 CCDC144AA2RUR9 1427 aa15.62■□□□□ 0.09
SMARCA4-217ENST00000591595 RIPK4P57078 832 aa15.61■□□□□ 0.09
SMARCA4-217ENST00000591595 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-217ENST00000591595 ADGBQ8N7X0 1667 aa15.61■□□□□ 0.09
SMARCA4-217ENST00000591595 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
SMARCA4-217ENST00000591595 PANK3Q9H999 370 aa15.6■□□□□ 0.09
SMARCA4-217ENST00000591595 ARID3AQ99856 593 aa15.59■□□□□ 0.09
SMARCA4-217ENST00000591595 MAGI1Q96QZ7 1491 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-217ENST00000591595 FSD2A1L4K1 749 aa15.58■□□□□ 0.09
SMARCA4-217ENST00000591595 ARHGEF12Q9NZN5 1544 aa15.58■□□□□ 0.08
SMARCA4-217ENST00000591595 TMF1P82094 1093 aa15.57■□□□□ 0.08
SMARCA4-217ENST00000591595 EIF4G3O43432 1585 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-217ENST00000591595 HAP1P54257 671 aaPredicted RBP15.56■□□□□ 0.08
SMARCA4-217ENST00000591595 SYNJ2O15056 1496 aa15.56■□□□□ 0.08
SMARCA4-217ENST00000591595 ATP10BO94823 1461 aa15.56■□□□□ 0.08
SMARCA4-217ENST00000591595 KIF20AO95235 890 aa15.56■□□□□ 0.08
SMARCA4-217ENST00000591595 ZSCAN20P17040 1043 aaPredicted RBP15.56■□□□□ 0.08
SMARCA4-217ENST00000591595 SKAP1Q86WV1 359 aa15.56■□□□□ 0.08
SMARCA4-217ENST00000591595 CRBNQ96SW2 442 aa15.56■□□□□ 0.08
SMARCA4-217ENST00000591595 MYH16Q9H6N6 1097 aa15.56■□□□□ 0.08
SMARCA4-217ENST00000591595 CDK11BP21127 795 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-217ENST00000591595 MTERF4Q7Z6M4 381 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-217ENST00000591595 TRIM44Q96DX7 344 aaPredicted RBP15.55■□□□□ 0.08
SMARCA4-217ENST00000591595 PARD3Q8TEW0 1356 aa15.55■□□□□ 0.08
SMARCA4-217ENST00000591595 PER1O15534 1290 aaPredicted RBP15.55■□□□□ 0.08
SMARCA4-217ENST00000591595 WDR43Q15061 677 aaKnown RBP eCLIP15.54■□□□□ 0.08
SMARCA4-217ENST00000591595 CEP170Q5SW79 1584 aa15.53■□□□□ 0.08
SMARCA4-217ENST00000591595 SHANK2Q9UPX8 1470 aa15.53■□□□□ 0.08
SMARCA4-217ENST00000591595 TERF1P54274 439 aa15.52■□□□□ 0.07
SMARCA4-217ENST00000591595 KNSTRNQ9Y448 316 aa15.52■□□□□ 0.07
SMARCA4-217ENST00000591595 PRAG1Q86YV5 1406 aa15.52■□□□□ 0.07
SMARCA4-217ENST00000591595 AMER1Q5JTC6 1135 aaPredicted RBP15.52■□□□□ 0.07
SMARCA4-217ENST00000591595 DISP3Q9P2K9 1392 aa15.51■□□□□ 0.07
SMARCA4-217ENST00000591595 CROCC2H7BZ55 1655 aa15.51■□□□□ 0.07
SMARCA4-217ENST00000591595 PTPRGP23470 1445 aa15.51■□□□□ 0.07
SMARCA4-217ENST00000591595 MRE11P49959 708 aa15.51■□□□□ 0.07
SMARCA4-217ENST00000591595 ABCC10Q5T3U5 1492 aa15.5■□□□□ 0.07
SMARCA4-217ENST00000591595 ADAMTS8Q9UP79 889 aa15.5■□□□□ 0.07
SMARCA4-217ENST00000591595 RGS22Q8NE09 1264 aa15.5■□□□□ 0.07
SMARCA4-217ENST00000591595 FAM135AQ9P2D6 1515 aa15.5■□□□□ 0.07
SMARCA4-217ENST00000591595 CCDC141Q6ZP82 1450 aa15.5■□□□□ 0.07
SMARCA4-217ENST00000591595 IRX3P78415 501 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-217ENST00000591595 DNTTIP2Q5QJE6 756 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-217ENST00000591595 TESK2Q96S53 571 aa15.49■□□□□ 0.07
SMARCA4-217ENST00000591595 ADCY10Q96PN6 1610 aa15.49■□□□□ 0.07
SMARCA4-217ENST00000591595 RNF216Q9NWF9 866 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-217ENST00000591595 GTPBP4Q9BZE4 634 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-217ENST00000591595 BCCIPQ9P287 314 aaKnown RBP eCLIP15.48■□□□□ 0.07
SMARCA4-217ENST00000591595 OFD1O75665 1012 aa15.48■□□□□ 0.07
SMARCA4-217ENST00000591595 LETM1O95202 739 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-217ENST00000591595 C20orf194Q5TEA3 1177 aa15.48■□□□□ 0.07
SMARCA4-217ENST00000591595 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-217ENST00000591595 HOMEZQ8IX15 550 aa15.47■□□□□ 0.07
SMARCA4-217ENST00000591595 CDC42BPAQ5VT25 1732 aa15.47■□□□□ 0.07
SMARCA4-217ENST00000591595 ERBINQ96RT1 1412 aa15.47■□□□□ 0.07
SMARCA4-217ENST00000591595 VGFO15240 615 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-217ENST00000591595 GZF1Q9H116 711 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-217ENST00000591595 NUP160Q12769 1436 aa15.45■□□□□ 0.06
SMARCA4-217ENST00000591595 TAF3Q5VWG9 929 aa15.45■□□□□ 0.06
SMARCA4-217ENST00000591595 KDM5DQ9BY66 1539 aa15.45■□□□□ 0.06
SMARCA4-217ENST00000591595 CCDC94Q9BW85 323 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-217ENST00000591595 ZBTB22O15209 634 aa15.44■□□□□ 0.06
SMARCA4-217ENST00000591595 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-217ENST00000591595 A2MP01023 1474 aa15.43■□□□□ 0.06
SMARCA4-217ENST00000591595 E9PSI1 815 aa15.43■□□□□ 0.06
SMARCA4-217ENST00000591595 GRPEL1Q9HAV7 217 aa15.43■□□□□ 0.06
SMARCA4-217ENST00000591595 COL17A1Q9UMD9 1497 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-217ENST00000591595 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
SMARCA4-217ENST00000591595 CCDC146Q8IYE0 955 aa15.42■□□□□ 0.06
SMARCA4-217ENST00000591595 ARHGAP5Q13017 1502 aa15.42■□□□□ 0.06
SMARCA4-217ENST00000591595 PPP2R1AP30153 589 aa15.42■□□□□ 0.06
SMARCA4-217ENST00000591595 R3HCC1Q9Y3T6 440 aaKnown RBP15.42■□□□□ 0.06
SMARCA4-217ENST00000591595 ABCA8O94911 1581 aa15.42■□□□□ 0.06
SMARCA4-217ENST00000591595 PLEKHH2Q8IVE3 1493 aa15.41■□□□□ 0.06
SMARCA4-217ENST00000591595 GPRASP1Q5JY77 1395 aa15.41■□□□□ 0.06
SMARCA4-217ENST00000591595 UQCRHLA0A096LP55 91 aa15.41■□□□□ 0.06
SMARCA4-217ENST00000591595 UQCRHP07919 91 aa15.41■□□□□ 0.06
SMARCA4-217ENST00000591595 MAPK8IP2Q13387 824 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-217ENST00000591595 TULP1O00294 542 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-217ENST00000591595 CDCA8Q53HL2 280 aa15.4■□□□□ 0.06
SMARCA4-217ENST00000591595 CNPY4Q8N129 248 aa15.4■□□□□ 0.06
SMARCA4-217ENST00000591595 SLKQ9H2G2 1235 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-217ENST00000591595 PLA2R1Q13018 1463 aa15.4■□□□□ 0.06
SMARCA4-217ENST00000591595 SYCP2Q9BX26 1530 aa15.39■□□□□ 0.05
SMARCA4-217ENST00000591595 CENPQQ7L2Z9 268 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-217ENST00000591595 CGNQ9P2M7 1197 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-217ENST00000591595 ARHGEF5Q12774 1597 aa15.38■□□□□ 0.05
SMARCA4-217ENST00000591595 BLMP54132 1417 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-217ENST00000591595 DYNC1I1O14576 645 aa15.38■□□□□ 0.05
SMARCA4-217ENST00000591595 FAM161AQ3B820 660 aa15.38■□□□□ 0.05
SMARCA4-217ENST00000591595 TRPM1Q7Z4N2 1603 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms