RNA–Protein interactions for RNA: ENST00000589669.1

CCDC130-211, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-211ENST00000589669 FAM212AQ96EL1 285 aa20.21■□□□□ 0.83
CCDC130-211ENST00000589669 A2ML1A8K2U0 1454 aa20.21■□□□□ 0.83
CCDC130-211ENST00000589669 CAMSAP1Q5T5Y3 1602 aa20.2■□□□□ 0.82
CCDC130-211ENST00000589669 DCAF8Q5TAQ9 597 aa20.2■□□□□ 0.82
CCDC130-211ENST00000589669 ABCC3O15438 1527 aa20.2■□□□□ 0.82
CCDC130-211ENST00000589669 PLA2R1Q13018 1463 aa20.19■□□□□ 0.82
CCDC130-211ENST00000589669 THEMISQ8N1K5 641 aaPredicted RBP20.19■□□□□ 0.82
CCDC130-211ENST00000589669 CEP170BQ9Y4F5 1589 aaPredicted RBP20.18■□□□□ 0.82
CCDC130-211ENST00000589669 ADGRL2O95490 1459 aa20.18■□□□□ 0.82
CCDC130-211ENST00000589669 CROCC2H7BZ55 1655 aa20.17■□□□□ 0.82
CCDC130-211ENST00000589669 PPARGC1BQ86YN6 1023 aaKnown RBP20.17■□□□□ 0.82
CCDC130-211ENST00000589669 MROH1Q8NDA8 1641 aa20.16■□□□□ 0.82
CCDC130-211ENST00000589669 MYO3AQ8NEV4 1616 aa20.16■□□□□ 0.82
CCDC130-211ENST00000589669 ARHGAP31Q2M1Z3 1444 aa20.16■□□□□ 0.82
CCDC130-211ENST00000589669 NLRP1Q9C000 1473 aa20.16■□□□□ 0.82
CCDC130-211ENST00000589669 KANK1Q14678 1352 aa20.15■□□□□ 0.82
CCDC130-211ENST00000589669 ZNF142P52746 1687 aaPredicted RBP20.14■□□□□ 0.81
CCDC130-211ENST00000589669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.14■□□□□ 0.81
CCDC130-211ENST00000589669 ANKLE2Q86XL3 938 aa20.13■□□□□ 0.81
CCDC130-211ENST00000589669 ZC3H13Q5T200 1668 aaKnown RBP20.12■□□□□ 0.81
CCDC130-211ENST00000589669 PRDM15P57071 1507 aaPredicted RBP20.12■□□□□ 0.81
CCDC130-211ENST00000589669 ERVK-7P63135 1459 aa20.11■□□□□ 0.81
CCDC130-211ENST00000589669 ANKRD50Q9ULJ7 1429 aa20.1■□□□□ 0.81
CCDC130-211ENST00000589669 ROCK1Q13464 1354 aa20.1■□□□□ 0.81
CCDC130-211ENST00000589669 SPATA31D1Q6ZQQ2 1576 aa20.1■□□□□ 0.81
CCDC130-211ENST00000589669 UGGT1Q9NYU2 1555 aa20.07■□□□□ 0.8
CCDC130-211ENST00000589669 LMTK2Q8IWU2 1503 aa20.07■□□□□ 0.8
CCDC130-211ENST00000589669 DEPDC5O75140 1603 aa20.06■□□□□ 0.8
CCDC130-211ENST00000589669 RGL2O15211 777 aa20.06■□□□□ 0.8
CCDC130-211ENST00000589669 VWDEQ8N2E2 1590 aa20.05■□□□□ 0.8
CCDC130-211ENST00000589669 LTBP4Q8N2S1 1624 aa20.05■□□□□ 0.8
CCDC130-211ENST00000589669 ZNF335Q9H4Z2 1342 aaPredicted RBP20.04■□□□□ 0.8
CCDC130-211ENST00000589669 ITGAEP38570 1179 aa20.04■□□□□ 0.8
CCDC130-211ENST00000589669 TSPYL2Q9H2G4 693 aaPredicted RBP20.04■□□□□ 0.8
CCDC130-211ENST00000589669 IDI1Q13907 227 aa20.02■□□□□ 0.8
CCDC130-211ENST00000589669 CEP152O94986 1710 aa20.02■□□□□ 0.79
CCDC130-211ENST00000589669 MED14O60244 1454 aa20■□□□□ 0.79
CCDC130-211ENST00000589669 SLC52A1Q9NWF4 448 aa20■□□□□ 0.79
CCDC130-211ENST00000589669 RRBP1Q9P2E9 1410 aaKnown RBP19.99■□□□□ 0.79
CCDC130-211ENST00000589669 NOS1P29475 1434 aa19.98■□□□□ 0.79
CCDC130-211ENST00000589669 IQSEC2Q5JU85 1478 aa19.98■□□□□ 0.79
CCDC130-211ENST00000589669 LTKP29376 864 aa19.97■□□□□ 0.79
CCDC130-211ENST00000589669 TXNDC2Q86VQ3 553 aa19.97■□□□□ 0.79
CCDC130-211ENST00000589669 CFAP65Q6ZU64 1925 aaKnown RBP19.96■□□□□ 0.79
CCDC130-211ENST00000589669 NPHP4O75161 1426 aaPredicted RBP19.96■□□□□ 0.79
CCDC130-211ENST00000589669 NEURL4Q96JN8 1562 aa19.95■□□□□ 0.78
CCDC130-211ENST00000589669 RPRD2Q5VT52 1461 aaKnown RBP19.95■□□□□ 0.78
CCDC130-211ENST00000589669 EID1Q9Y6B2 187 aa19.95■□□□□ 0.78
CCDC130-211ENST00000589669 ARHGAP23Q9P227 1491 aa19.93■□□□□ 0.78
CCDC130-211ENST00000589669 EFCAB6Q5THR3 1501 aa19.93■□□□□ 0.78
CCDC130-211ENST00000589669 PYGBP11216 843 aa19.93■□□□□ 0.78
CCDC130-211ENST00000589669 NUP155O75694 1391 aa19.93■□□□□ 0.78
CCDC130-211ENST00000589669 TMEM2Q9UHN6 1383 aa19.93■□□□□ 0.78
CCDC130-211ENST00000589669 RNF25Q96BH1 459 aaPredicted RBP19.92■□□□□ 0.78
CCDC130-211ENST00000589669 SLIT1O75093 1534 aa19.92■□□□□ 0.78
CCDC130-211ENST00000589669 CHRM1P11229 460 aaPredicted RBP19.91■□□□□ 0.78
CCDC130-211ENST00000589669 SCAF11Q99590 1463 aaKnown RBP19.9■□□□□ 0.78
CCDC130-211ENST00000589669 UBR1Q8IWV7 1749 aa19.9■□□□□ 0.78
CCDC130-211ENST00000589669 PAK3O75914 559 aaPredicted RBP19.89■□□□□ 0.77
CCDC130-211ENST00000589669 POLR1AO95602 1720 aaPredicted RBP19.89■□□□□ 0.77
CCDC130-211ENST00000589669 CCDC61Q9Y6R9 512 aa19.89■□□□□ 0.77
CCDC130-211ENST00000589669 UNC13BO14795 1591 aa19.87■□□□□ 0.77
CCDC130-211ENST00000589669 SYNMO15061 1565 aa19.87■□□□□ 0.77
CCDC130-211ENST00000589669 CPS1P31327 1500 aa19.86■□□□□ 0.77
CCDC130-211ENST00000589669 TET3O43151 1660 aa19.85■□□□□ 0.77
CCDC130-211ENST00000589669 PIK3C2BO00750 1634 aa19.85■□□□□ 0.77
CCDC130-211ENST00000589669 UBAP1LF5GYI3 381 aa19.85■□□□□ 0.77
CCDC130-211ENST00000589669 CD44P16070 742 aaKnown RBP19.85■□□□□ 0.77
CCDC130-211ENST00000589669 HDGFP51858 240 aaKnown RBP19.85■□□□□ 0.77
CCDC130-211ENST00000589669 KDM5AP29375 1690 aaKnown RBP19.84■□□□□ 0.77
CCDC130-211ENST00000589669 NAIPQ13075 1403 aa19.84■□□□□ 0.77
CCDC130-211ENST00000589669 IQGAP1P46940 1657 aa19.83■□□□□ 0.76
CCDC130-211ENST00000589669 IQGAP3Q86VI3 1631 aa19.8■□□□□ 0.76
CCDC130-211ENST00000589669 RIOK3O14730 519 aaKnown RBP19.8■□□□□ 0.76
CCDC130-211ENST00000589669 TOM1O60784 492 aa19.8■□□□□ 0.76
CCDC130-211ENST00000589669 HFM1A2PYH4 1435 aa19.78■□□□□ 0.76
CCDC130-211ENST00000589669 ADGRB3O60242 1522 aa19.78■□□□□ 0.76
CCDC130-211ENST00000589669 C19orf67A6NJJ6 358 aa19.78■□□□□ 0.76
CCDC130-211ENST00000589669 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.78■□□□□ 0.76
CCDC130-211ENST00000589669 ZRANB1Q9UGI0 708 aa19.78■□□□□ 0.76
CCDC130-211ENST00000589669 GCC2Q8IWJ2 1684 aa19.78■□□□□ 0.76
CCDC130-211ENST00000589669 CHGAP10645 457 aaKnown RBP19.77■□□□□ 0.76
CCDC130-211ENST00000589669 SLC26A8Q96RN1 970 aa19.77■□□□□ 0.76
CCDC130-211ENST00000589669 KCNA6P17658 529 aa19.76■□□□□ 0.75
CCDC130-211ENST00000589669 ZFYVE9O95405 1425 aa19.76■□□□□ 0.75
CCDC130-211ENST00000589669 E9PCH4 1651 aa19.75■□□□□ 0.75
CCDC130-211ENST00000589669 TRIM52Q96A61 297 aa19.74■□□□□ 0.75
CCDC130-211ENST00000589669 LRRC7Q96NW7 1537 aa19.74■□□□□ 0.75
CCDC130-211ENST00000589669 RIMS2Q9UQ26 1411 aa19.74■□□□□ 0.75
CCDC130-211ENST00000589669 PPP1R15AO75807 674 aaPredicted RBP19.73■□□□□ 0.75
CCDC130-211ENST00000589669 BCANQ96GW7 911 aa19.73■□□□□ 0.75
CCDC130-211ENST00000589669 TMEM131LA2VDJ0 1609 aa19.73■□□□□ 0.75
CCDC130-211ENST00000589669 PLEKHG1Q9ULL1 1385 aa19.72■□□□□ 0.75
CCDC130-211ENST00000589669 TBX22Q9Y458 520 aa19.72■□□□□ 0.75
CCDC130-211ENST00000589669 PIP4K2BP78356 416 aa19.7■□□□□ 0.74
CCDC130-211ENST00000589669 STRCP1A6NGW2 1772 aa19.67■□□□□ 0.74
CCDC130-211ENST00000589669 VGFO15240 615 aaPredicted RBP19.67■□□□□ 0.74
CCDC130-211ENST00000589669 NUTM2DQ5VT03 806 aaPredicted RBP19.67■□□□□ 0.74
CCDC130-211ENST00000589669 PROSER2Q86WR7 435 aaPredicted RBP19.67■□□□□ 0.74
CCDC130-211ENST00000589669 KIF12Q96FN5 646 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms