RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 SSTR3P32745 418 aaPredicted RBP13.04□□□□□ -0.32
ATG4D-210ENST00000588972 SLAIN1Q8ND83 568 aa13.04□□□□□ -0.32
ATG4D-210ENST00000588972 SLC39A7Q92504 469 aa13.04□□□□□ -0.32
ATG4D-210ENST00000588972 CLUAP1Q96AJ1 413 aa13.04□□□□□ -0.32
ATG4D-210ENST00000588972 PODXL2Q9NZ53 605 aa13.03□□□□□ -0.32
ATG4D-210ENST00000588972 MCM6Q14566 821 aa13.02□□□□□ -0.33
ATG4D-210ENST00000588972 SKIV2LQ15477 1246 aaKnown RBP13.02□□□□□ -0.33
ATG4D-210ENST00000588972 TYW1BQ6NUM6 668 aa13.02□□□□□ -0.33
ATG4D-210ENST00000588972 DCBLD2Q96PD2 775 aa13.02□□□□□ -0.33
ATG4D-210ENST00000588972 PRG4Q92954 1404 aaPredicted RBP13□□□□□ -0.33
ATG4D-210ENST00000588972 TRAK2O60296 914 aa13□□□□□ -0.33
ATG4D-210ENST00000588972 RUSC2Q8N2Y8 1516 aa12.99□□□□□ -0.33
ATG4D-210ENST00000588972 C7P10643 843 aa12.99□□□□□ -0.33
ATG4D-210ENST00000588972 BEGAINQ9BUH8 593 aa12.99□□□□□ -0.33
ATG4D-210ENST00000588972 FAM217BQ9NTX9 383 aaPredicted RBP12.99□□□□□ -0.33
ATG4D-210ENST00000588972 PCDHGA4Q9Y5G9 962 aa12.99□□□□□ -0.33
ATG4D-210ENST00000588972 FAM161AQ3B820 660 aa12.98□□□□□ -0.33
ATG4D-210ENST00000588972 METTL3Q86U44 580 aaKnown RBP12.98□□□□□ -0.33
ATG4D-210ENST00000588972 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
ATG4D-210ENST00000588972 FBXW7Q969H0 707 aa12.97□□□□□ -0.33
ATG4D-210ENST00000588972 JPH4Q96JJ6 628 aa12.97□□□□□ -0.33
ATG4D-210ENST00000588972 ABCC10Q5T3U5 1492 aa12.97□□□□□ -0.33
ATG4D-210ENST00000588972 DIP2BQ9P265 1576 aa12.96□□□□□ -0.33
ATG4D-210ENST00000588972 KDM4FA0A1W2PPD8 638 aa12.95□□□□□ -0.34
ATG4D-210ENST00000588972 OATP04181 439 aa12.95□□□□□ -0.34
ATG4D-210ENST00000588972 TRIM26Q12899 539 aaPredicted RBP12.95□□□□□ -0.34
ATG4D-210ENST00000588972 PROCA1Q8NCQ7 364 aaPredicted RBP12.95□□□□□ -0.34
ATG4D-210ENST00000588972 NLRP7Q8WX94 980 aa12.95□□□□□ -0.34
ATG4D-210ENST00000588972 METRNQ9UJH8 293 aa12.95□□□□□ -0.34
ATG4D-210ENST00000588972 ADCY10Q96PN6 1610 aa12.93□□□□□ -0.34
ATG4D-210ENST00000588972 PADI6Q6TGC4 694 aa12.93□□□□□ -0.34
ATG4D-210ENST00000588972 PXYLP1Q8TE99 480 aa12.93□□□□□ -0.34
ATG4D-210ENST00000588972 ADGRG1Q9Y653 693 aa12.93□□□□□ -0.34
ATG4D-210ENST00000588972 CCDC82Q8N4S0 544 aa12.92□□□□□ -0.34
ATG4D-210ENST00000588972 CERKQ8TCT0 537 aa12.92□□□□□ -0.34
ATG4D-210ENST00000588972 POLR3EQ9NVU0 708 aa12.92□□□□□ -0.34
ATG4D-210ENST00000588972 FOSBP53539 338 aa12.91□□□□□ -0.34
ATG4D-210ENST00000588972 FAM69CQ0P6D2 419 aa12.91□□□□□ -0.34
ATG4D-210ENST00000588972 KDM6BO15054 1643 aa12.91□□□□□ -0.34
ATG4D-210ENST00000588972 C6orf132Q5T0Z8 1188 aa12.9□□□□□ -0.34
ATG4D-210ENST00000588972 MYSM1Q5VVJ2 828 aa12.9□□□□□ -0.34
ATG4D-210ENST00000588972 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.9□□□□□ -0.34
ATG4D-210ENST00000588972 PROSER2Q86WR7 435 aaPredicted RBP12.89□□□□□ -0.35
ATG4D-210ENST00000588972 TTC13Q8NBP0 860 aa12.89□□□□□ -0.35
ATG4D-210ENST00000588972 ATP1B4Q9UN42 357 aaPredicted RBP12.89□□□□□ -0.35
ATG4D-210ENST00000588972 HRCP23327 699 aa12.88□□□□□ -0.35
ATG4D-210ENST00000588972 POM121Q96HA1 1249 aa12.88□□□□□ -0.35
ATG4D-210ENST00000588972 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
ATG4D-210ENST00000588972 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.87□□□□□ -0.35
ATG4D-210ENST00000588972 FNBP4Q8N3X1 1017 aaPredicted RBP12.86□□□□□ -0.35
ATG4D-210ENST00000588972 CLK2P49760 499 aaKnown RBP12.85□□□□□ -0.35
ATG4D-210ENST00000588972 ZDHHC16Q969W1 377 aa12.85□□□□□ -0.35
ATG4D-210ENST00000588972 KIAA0586Q9BVV6 1533 aa12.84□□□□□ -0.35
ATG4D-210ENST00000588972 TSPOAP1O95153 1857 aa12.84□□□□□ -0.35
ATG4D-210ENST00000588972 CUL7Q14999 1698 aa12.83□□□□□ -0.35
ATG4D-210ENST00000588972 SPDYE5A6NIY4 337 aa12.83□□□□□ -0.36
ATG4D-210ENST00000588972 RAD21O60216 631 aa12.83□□□□□ -0.36
ATG4D-210ENST00000588972 ZNF454Q8N9F8 522 aa12.83□□□□□ -0.36
ATG4D-210ENST00000588972 TBC1D2Q9BYX2 928 aa12.83□□□□□ -0.36
ATG4D-210ENST00000588972 ZNF777Q9ULD5 760 aaPredicted RBP12.83□□□□□ -0.36
ATG4D-210ENST00000588972 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
ATG4D-210ENST00000588972 ADAM33Q9BZ11 813 aa12.81□□□□□ -0.36
ATG4D-210ENST00000588972 RFC5P40937 340 aa12.8□□□□□ -0.36
ATG4D-210ENST00000588972 PRSS12P56730 875 aa12.8□□□□□ -0.36
ATG4D-210ENST00000588972 DIXDC1Q155Q3 683 aa12.79□□□□□ -0.36
ATG4D-210ENST00000588972 BANK1Q8NDB2 785 aa12.79□□□□□ -0.36
ATG4D-210ENST00000588972 RBM46Q8TBY0 533 aaKnown RBP12.79□□□□□ -0.36
ATG4D-210ENST00000588972 FBXO31Q5XUX0 539 aaPredicted RBP12.78□□□□□ -0.36
ATG4D-210ENST00000588972 CDCA7LQ96GN5 454 aa12.78□□□□□ -0.36
ATG4D-210ENST00000588972 COG6Q9Y2V7 657 aa12.78□□□□□ -0.36
ATG4D-210ENST00000588972 PDIA4P13667 645 aaKnown RBP12.77□□□□□ -0.37
ATG4D-210ENST00000588972 SNRKQ9NRH2 765 aa12.77□□□□□ -0.37
ATG4D-210ENST00000588972 LIMD1Q9UGP4 676 aa12.77□□□□□ -0.37
ATG4D-210ENST00000588972 KIF27Q86VH2 1401 aa12.77□□□□□ -0.37
ATG4D-210ENST00000588972 ABCC2Q92887 1545 aa12.77□□□□□ -0.37
ATG4D-210ENST00000588972 IGF1RP08069 1367 aa12.76□□□□□ -0.37
ATG4D-210ENST00000588972 NUDT7P0C024 238 aa12.75□□□□□ -0.37
ATG4D-210ENST00000588972 GLI2P10070 1586 aa12.75□□□□□ -0.37
ATG4D-210ENST00000588972 PTPRGP23470 1445 aa12.75□□□□□ -0.37
ATG4D-210ENST00000588972 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
ATG4D-210ENST00000588972 PPRC1Q5VV67 1664 aaKnown RBP12.74□□□□□ -0.37
ATG4D-210ENST00000588972 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.74□□□□□ -0.37
ATG4D-210ENST00000588972 PPP2R2DQ66LE6 453 aa12.74□□□□□ -0.37
ATG4D-210ENST00000588972 SPIRE2Q8WWL2 714 aa12.74□□□□□ -0.37
ATG4D-210ENST00000588972 FAM198AQ9UFP1 575 aa12.74□□□□□ -0.37
ATG4D-210ENST00000588972 SERPINA10Q9UK55 444 aa12.74□□□□□ -0.37
ATG4D-210ENST00000588972 PLB1Q6P1J6 1458 aa12.73□□□□□ -0.37
ATG4D-210ENST00000588972 CARMIL2Q6F5E8 1435 aa12.73□□□□□ -0.37
ATG4D-210ENST00000588972 RIC3Q7Z5B4 369 aa12.73□□□□□ -0.37
ATG4D-210ENST00000588972 ASXL2Q76L83 1435 aa12.72□□□□□ -0.37
ATG4D-210ENST00000588972 TNIKQ9UKE5 1360 aa12.72□□□□□ -0.37
ATG4D-210ENST00000588972 RCCD1A6NED2 376 aa12.72□□□□□ -0.37
ATG4D-210ENST00000588972 TMEM259Q4ZIN3 620 aa12.72□□□□□ -0.37
ATG4D-210ENST00000588972 ARSIQ5FYB1 569 aa12.72□□□□□ -0.37
ATG4D-210ENST00000588972 CCDC97Q96F63 343 aaPredicted RBP12.72□□□□□ -0.37
ATG4D-210ENST00000588972 IQGAP2Q13576 1575 aa12.72□□□□□ -0.37
ATG4D-210ENST00000588972 ADGRL1O94910 1474 aa12.72□□□□□ -0.37
ATG4D-210ENST00000588972 CD46P15529 392 aa12.71□□□□□ -0.37
ATG4D-210ENST00000588972 EYA1Q99502 592 aa12.71□□□□□ -0.37
ATG4D-210ENST00000588972 UHRF1BP1LA0JNW5 1464 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms