RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 CFAP65Q6ZU64 1925 aaKnown RBP22.98■■□□□ 1.27
NFIX-210ENST00000588228 CLTCQ00610 1675 aaKnown RBP22.97■■□□□ 1.27
NFIX-210ENST00000588228 IDI1Q13907 227 aa22.97■■□□□ 1.27
NFIX-210ENST00000588228 MLECQ14165 292 aa22.97■■□□□ 1.27
NFIX-210ENST00000588228 SCAF11Q99590 1463 aaKnown RBP22.94■■□□□ 1.26
NFIX-210ENST00000588228 PPLO60437 1756 aa22.94■■□□□ 1.26
NFIX-210ENST00000588228 FBXO31Q5XUX0 539 aaPredicted RBP22.93■■□□□ 1.26
NFIX-210ENST00000588228 SPATA31D1Q6ZQQ2 1576 aa22.93■■□□□ 1.26
NFIX-210ENST00000588228 CCER2I3L3R5 266 aa22.93■■□□□ 1.26
NFIX-210ENST00000588228 IQGAP1P46940 1657 aa22.92■■□□□ 1.26
NFIX-210ENST00000588228 ESF1Q9H501 851 aaKnown RBP22.92■■□□□ 1.26
NFIX-210ENST00000588228 PIK3C2GO75747 1445 aa22.92■■□□□ 1.26
NFIX-210ENST00000588228 CFAP70Q5T0N1 1121 aa22.91■■□□□ 1.26
NFIX-210ENST00000588228 TESK2Q96S53 571 aa22.91■■□□□ 1.26
NFIX-210ENST00000588228 NEXMIFQ5QGS0 1516 aa22.9■■□□□ 1.26
NFIX-210ENST00000588228 CENPBP07199 599 aaPredicted RBP22.9■■□□□ 1.26
NFIX-210ENST00000588228 TMEM131LA2VDJ0 1609 aa22.89■■□□□ 1.26
NFIX-210ENST00000588228 VGFO15240 615 aaPredicted RBP22.89■■□□□ 1.25
NFIX-210ENST00000588228 YTHDC1Q96MU7 727 aaKnown RBP22.89■■□□□ 1.25
NFIX-210ENST00000588228 EIF3AQ14152 1382 aaKnown RBP22.88■■□□□ 1.25
NFIX-210ENST00000588228 ZMYM3Q14202 1370 aa22.88■■□□□ 1.25
NFIX-210ENST00000588228 POLR3GLQ9BT43 218 aa22.88■■□□□ 1.25
NFIX-210ENST00000588228 ZFYVE9O95405 1425 aa22.88■■□□□ 1.25
NFIX-210ENST00000588228 SETBP1Q9Y6X0 1596 aa22.87■■□□□ 1.25
NFIX-210ENST00000588228 C14orf93Q9H972 538 aaKnown RBP22.86■■□□□ 1.25
NFIX-210ENST00000588228 TMF1P82094 1093 aa22.84■■□□□ 1.25
NFIX-210ENST00000588228 DISP3Q9P2K9 1392 aa22.82■■□□□ 1.24
NFIX-210ENST00000588228 ADGRB1O14514 1584 aa22.8■■□□□ 1.24
NFIX-210ENST00000588228 STAG3Q9UJ98 1225 aa22.8■■□□□ 1.24
NFIX-210ENST00000588228 SLC24A1O60721 1099 aa22.79■■□□□ 1.24
NFIX-210ENST00000588228 PRKRIP1Q9H875 184 aaPredicted RBP22.79■■□□□ 1.24
NFIX-210ENST00000588228 A2ML1A8K2U0 1454 aa22.78■■□□□ 1.24
NFIX-210ENST00000588228 NUTM2DQ5VT03 806 aaPredicted RBP22.77■■□□□ 1.24
NFIX-210ENST00000588228 MYO5BQ9ULV0 1848 aa22.76■■□□□ 1.23
NFIX-210ENST00000588228 CDCA8Q53HL2 280 aa22.76■■□□□ 1.23
NFIX-210ENST00000588228 TNRQ92752 1358 aa22.76■■□□□ 1.23
NFIX-210ENST00000588228 MYO3AQ8NEV4 1616 aa22.74■■□□□ 1.23
NFIX-210ENST00000588228 SBNO2Q9Y2G9 1366 aa22.73■■□□□ 1.23
NFIX-210ENST00000588228 RIMS2Q9UQ26 1411 aa22.7■■□□□ 1.22
NFIX-210ENST00000588228 TMEM132EQ6IEE7 984 aa22.7■■□□□ 1.22
NFIX-210ENST00000588228 CENPJQ9HC77 1338 aaPredicted RBP22.69■■□□□ 1.22
NFIX-210ENST00000588228 TRAK1Q9UPV9 953 aa22.68■■□□□ 1.22
NFIX-210ENST00000588228 KDM5AP29375 1690 aaKnown RBP22.67■■□□□ 1.22
NFIX-210ENST00000588228 KTN1Q86UP2 1357 aaKnown RBP22.66■■□□□ 1.22
NFIX-210ENST00000588228 NLRP1Q9C000 1473 aa22.65■■□□□ 1.22
NFIX-210ENST00000588228 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.65■■□□□ 1.22
NFIX-210ENST00000588228 ASXL1Q8IXJ9 1541 aa22.65■■□□□ 1.22
NFIX-210ENST00000588228 FER1L4A9Z1Z3 1794 aa22.64■■□□□ 1.21
NFIX-210ENST00000588228 PER1O15534 1290 aaPredicted RBP22.63■■□□□ 1.21
NFIX-210ENST00000588228 PANK3Q9H999 370 aa22.63■■□□□ 1.21
NFIX-210ENST00000588228 ALKQ9UM73 1620 aa22.63■■□□□ 1.21
NFIX-210ENST00000588228 HDGFP51858 240 aaKnown RBP22.62■■□□□ 1.21
NFIX-210ENST00000588228 C3P01024 1663 aa22.61■■□□□ 1.21
NFIX-210ENST00000588228 CEBPAP49715 358 aaPredicted RBP22.61■■□□□ 1.21
NFIX-210ENST00000588228 RALBP1Q15311 655 aa22.6■■□□□ 1.21
NFIX-210ENST00000588228 QRICH2Q9H0J4 1663 aa22.6■■□□□ 1.21
NFIX-210ENST00000588228 UBR1Q8IWV7 1749 aa22.59■■□□□ 1.21
NFIX-210ENST00000588228 ARHGEF28Q8N1W1 1705 aaKnown RBP22.59■■□□□ 1.21
NFIX-210ENST00000588228 TMEM2Q9UHN6 1383 aa22.59■■□□□ 1.21
NFIX-210ENST00000588228 MRS2Q9HD23 443 aa22.58■■□□□ 1.21
NFIX-210ENST00000588228 YTHDC2Q9H6S0 1430 aaKnown RBP22.58■■□□□ 1.21
NFIX-210ENST00000588228 CCDC184Q52MB2 194 aa22.57■■□□□ 1.2
NFIX-210ENST00000588228 MYOM1P52179 1685 aa22.55■■□□□ 1.2
NFIX-210ENST00000588228 PARD3Q8TEW0 1356 aa22.54■■□□□ 1.2
NFIX-210ENST00000588228 PTPRMP28827 1452 aa22.54■■□□□ 1.2
NFIX-210ENST00000588228 CNGB1Q14028 1251 aaPredicted RBP22.54■■□□□ 1.2
NFIX-210ENST00000588228 PUS7Q96PZ0 661 aaKnown RBP22.54■■□□□ 1.2
NFIX-210ENST00000588228 SENP3Q9H4L4 574 aaPredicted RBP22.54■■□□□ 1.2
NFIX-210ENST00000588228 STK26Q9P289 416 aa22.54■■□□□ 1.2
NFIX-210ENST00000588228 MYBBP1AQ9BQG0 1328 aaKnown RBP22.53■■□□□ 1.2
NFIX-210ENST00000588228 NRXN3Q9Y4C0 1643 aa22.52■■□□□ 1.2
NFIX-210ENST00000588228 SETD1AO15047 1707 aaKnown RBP22.52■■□□□ 1.2
NFIX-210ENST00000588228 LRPPRCP42704 1394 aaKnown RBP22.51■■□□□ 1.19
NFIX-210ENST00000588228 EVC2Q86UK5 1308 aa22.51■■□□□ 1.19
NFIX-210ENST00000588228 DLC1Q96QB1 1528 aa22.5■■□□□ 1.19
NFIX-210ENST00000588228 KNSTRNQ9Y448 316 aa22.5■■□□□ 1.19
NFIX-210ENST00000588228 TULP4Q9NRJ4 1543 aa22.48■■□□□ 1.19
NFIX-210ENST00000588228 BRD4O60885 1362 aaPredicted RBP22.48■■□□□ 1.19
NFIX-210ENST00000588228 ABCC11Q96J66 1382 aa22.48■■□□□ 1.19
NFIX-210ENST00000588228 PRAM1Q96QH2 718 aa22.48■■□□□ 1.19
NFIX-210ENST00000588228 SLIT1O75093 1534 aa22.48■■□□□ 1.19
NFIX-210ENST00000588228 POGKQ9P215 609 aa22.47■■□□□ 1.19
NFIX-210ENST00000588228 ARHGAP23Q9P227 1491 aa22.47■■□□□ 1.19
NFIX-210ENST00000588228 NPC1L1Q9UHC9 1359 aa22.47■■□□□ 1.19
NFIX-210ENST00000588228 PLEKHG1Q9ULL1 1385 aa22.47■■□□□ 1.19
NFIX-210ENST00000588228 PLPPR3Q6T4P5 718 aa22.46■■□□□ 1.19
NFIX-210ENST00000588228 ADAMTSL3P82987 1691 aa22.46■■□□□ 1.19
NFIX-210ENST00000588228 AMER1Q5JTC6 1135 aaPredicted RBP22.46■■□□□ 1.19
NFIX-210ENST00000588228 CC2D1BQ5T0F9 858 aaKnown RBP22.46■■□□□ 1.19
NFIX-210ENST00000588228 RIMS1Q86UR5 1692 aaKnown RBP22.45■■□□□ 1.18
NFIX-210ENST00000588228 NLRP13Q86W25 1043 aa22.45■■□□□ 1.18
NFIX-210ENST00000588228 METP08581 1390 aa22.45■■□□□ 1.18
NFIX-210ENST00000588228 FAM9BQ8IZU0 186 aa22.44■■□□□ 1.18
NFIX-210ENST00000588228 THEMISQ8N1K5 641 aaPredicted RBP22.44■■□□□ 1.18
NFIX-210ENST00000588228 TMC1Q8TDI8 760 aa22.44■■□□□ 1.18
NFIX-210ENST00000588228 EID1Q9Y6B2 187 aa22.44■■□□□ 1.18
NFIX-210ENST00000588228 LTKP29376 864 aa22.43■■□□□ 1.18
NFIX-210ENST00000588228 SAFB2Q14151 953 aaKnown RBP eCLIP22.43■■□□□ 1.18
NFIX-210ENST00000588228 TXNDC2Q86VQ3 553 aa22.43■■□□□ 1.18
NFIX-210ENST00000588228 ADAMTS13Q76LX8 1427 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms