RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 RBM6P78332 1123 aaKnown RBP17.7■□□□□ 0.42
GGA3-217ENST00000583667 QTRT2Q9H974 415 aaKnown RBP17.7■□□□□ 0.42
GGA3-217ENST00000583667 HFM1A2PYH4 1435 aa17.7■□□□□ 0.42
GGA3-217ENST00000583667 ACIN1Q9UKV3 1341 aaKnown RBP17.7■□□□□ 0.42
GGA3-217ENST00000583667 TET3O43151 1660 aa17.69■□□□□ 0.42
GGA3-217ENST00000583667 RSPH4AQ5TD94 716 aa17.69■□□□□ 0.42
GGA3-217ENST00000583667 NKTRP30414 1462 aaKnown RBP17.69■□□□□ 0.42
GGA3-217ENST00000583667 CCDC141Q6ZP82 1450 aa17.69■□□□□ 0.42
GGA3-217ENST00000583667 ROCK1Q13464 1354 aa17.68■□□□□ 0.42
GGA3-217ENST00000583667 SHPRHQ149N8 1683 aa17.67■□□□□ 0.42
GGA3-217ENST00000583667 ABCC5O15440 1437 aa17.67■□□□□ 0.42
GGA3-217ENST00000583667 CAMSAP2Q08AD1 1489 aa17.67■□□□□ 0.42
GGA3-217ENST00000583667 CFAP65Q6ZU64 1925 aaKnown RBP17.66■□□□□ 0.42
GGA3-217ENST00000583667 RAB3GAP2Q9H2M9 1393 aa17.66■□□□□ 0.42
GGA3-217ENST00000583667 DAPK1P53355 1430 aa17.66■□□□□ 0.42
GGA3-217ENST00000583667 STAG3Q9UJ98 1225 aa17.65■□□□□ 0.42
GGA3-217ENST00000583667 NWD1Q149M9 1564 aa17.65■□□□□ 0.42
GGA3-217ENST00000583667 ATAD2Q6PL18 1390 aa17.65■□□□□ 0.42
GGA3-217ENST00000583667 NAIPQ13075 1403 aa17.64■□□□□ 0.42
GGA3-217ENST00000583667 AHDC1Q5TGY3 1603 aaPredicted RBP17.64■□□□□ 0.41
GGA3-217ENST00000583667 TSPY4P0CV99 314 aa17.63■□□□□ 0.41
GGA3-217ENST00000583667 TSPY10P0CW01 314 aa17.63■□□□□ 0.41
GGA3-217ENST00000583667 DHX57Q6P158 1386 aaKnown RBP17.63■□□□□ 0.41
GGA3-217ENST00000583667 ARHGEF5Q12774 1597 aa17.62■□□□□ 0.41
GGA3-217ENST00000583667 C8orf37Q96NL8 207 aa17.61■□□□□ 0.41
GGA3-217ENST00000583667 PIK3C2BO00750 1634 aa17.61■□□□□ 0.41
GGA3-217ENST00000583667 NGLY1Q96IV0 654 aa17.6■□□□□ 0.41
GGA3-217ENST00000583667 ADGRL2O95490 1459 aa17.6■□□□□ 0.41
GGA3-217ENST00000583667 DIP2AQ14689 1571 aa17.6■□□□□ 0.41
GGA3-217ENST00000583667 MROH1Q8NDA8 1641 aa17.6■□□□□ 0.41
GGA3-217ENST00000583667 KDM5AP29375 1690 aaKnown RBP17.6■□□□□ 0.41
GGA3-217ENST00000583667 ARHGAP31Q2M1Z3 1444 aa17.59■□□□□ 0.41
GGA3-217ENST00000583667 IDI1Q13907 227 aa17.59■□□□□ 0.41
GGA3-217ENST00000583667 BCANQ96GW7 911 aa17.59■□□□□ 0.41
GGA3-217ENST00000583667 CADPS2Q86UW7 1296 aa17.58■□□□□ 0.4
GGA3-217ENST00000583667 CEP152O94986 1710 aa17.58■□□□□ 0.4
GGA3-217ENST00000583667 NCOA3Q9Y6Q9 1424 aa17.57■□□□□ 0.4
GGA3-217ENST00000583667 BRINP3Q76B58 766 aa17.57■□□□□ 0.4
GGA3-217ENST00000583667 C14orf37Q86TY3 774 aa17.57■□□□□ 0.4
GGA3-217ENST00000583667 EFCAB6Q5THR3 1501 aa17.57■□□□□ 0.4
GGA3-217ENST00000583667 ATF3P18847 181 aa17.56■□□□□ 0.4
GGA3-217ENST00000583667 CCDC125Q86Z20 511 aa17.56■□□□□ 0.4
GGA3-217ENST00000583667 C19orf44Q9H6X5 657 aa17.56■□□□□ 0.4
GGA3-217ENST00000583667 GCC2Q8IWJ2 1684 aa17.55■□□□□ 0.4
GGA3-217ENST00000583667 CROCC2H7BZ55 1655 aa17.53■□□□□ 0.4
GGA3-217ENST00000583667 EIF2AK4Q9P2K8 1649 aaKnown RBP17.53■□□□□ 0.4
GGA3-217ENST00000583667 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
GGA3-217ENST00000583667 EP400Q96L91 3159 aa17.52■□□□□ 0.4
GGA3-217ENST00000583667 CHIC2Q9UKJ5 165 aa17.52■□□□□ 0.4
GGA3-217ENST00000583667 MAST1Q9Y2H9 1570 aa17.52■□□□□ 0.39
GGA3-217ENST00000583667 LRRC59Q96AG4 307 aaKnown RBP17.51■□□□□ 0.39
GGA3-217ENST00000583667 CHD2O14647 1828 aaKnown RBP17.51■□□□□ 0.39
GGA3-217ENST00000583667 RRP7BPQ9NSQ0 103 aa17.5■□□□□ 0.39
GGA3-217ENST00000583667 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.5■□□□□ 0.39
GGA3-217ENST00000583667 ADAMTS2O95450 1211 aa17.48■□□□□ 0.39
GGA3-217ENST00000583667 TBX22Q9Y458 520 aa17.48■□□□□ 0.39
GGA3-217ENST00000583667 PNPLA6Q8IY17 1366 aa17.46■□□□□ 0.39
GGA3-217ENST00000583667 PLEKHG1Q9ULL1 1385 aa17.46■□□□□ 0.39
GGA3-217ENST00000583667 USP21Q9UK80 565 aa17.46■□□□□ 0.39
GGA3-217ENST00000583667 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
GGA3-217ENST00000583667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.388e-7■■■■□ 22.1
GGA3-217ENST00000583667 LRP5O75197 1615 aa17.43■□□□□ 0.38
GGA3-217ENST00000583667 ASXL1Q8IXJ9 1541 aa17.43■□□□□ 0.38
GGA3-217ENST00000583667 DDX17Q92841 729 aaKnown RBP17.43■□□□□ 0.38
GGA3-217ENST00000583667 FNBP4Q8N3X1 1017 aaPredicted RBP17.42■□□□□ 0.38
GGA3-217ENST00000583667 TIMELESSQ9UNS1 1208 aa17.42■□□□□ 0.38
GGA3-217ENST00000583667 ADGRB3O60242 1522 aa17.42■□□□□ 0.38
GGA3-217ENST00000583667 ZFYVE9O95405 1425 aa17.41■□□□□ 0.38
GGA3-217ENST00000583667 ANKRD50Q9ULJ7 1429 aa17.41■□□□□ 0.38
GGA3-217ENST00000583667 DUOX2Q9NRD8 1548 aa17.41■□□□□ 0.38
GGA3-217ENST00000583667 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
GGA3-217ENST00000583667 DEFB132Q7Z7B7 95 aa17.4■□□□□ 0.38
GGA3-217ENST00000583667 SLC52A1Q9NWF4 448 aa17.4■□□□□ 0.38
GGA3-217ENST00000583667 HDGFP51858 240 aaKnown RBP17.39■□□□□ 0.37
GGA3-217ENST00000583667 KIF15Q9NS87 1388 aa17.39■□□□□ 0.37
GGA3-217ENST00000583667 ATRNO75882 1429 aa17.38■□□□□ 0.37
GGA3-217ENST00000583667 NOS1P29475 1434 aa17.38■□□□□ 0.37
GGA3-217ENST00000583667 NHSL1Q5SYE7 1610 aa17.38■□□□□ 0.37
GGA3-217ENST00000583667 BLMP54132 1417 aaPredicted RBP17.37■□□□□ 0.37
GGA3-217ENST00000583667 RIMS2Q9UQ26 1411 aa17.37■□□□□ 0.37
GGA3-217ENST00000583667 MPHOSPH9Q99550 1183 aa17.36■□□□□ 0.37
GGA3-217ENST00000583667 AMOTL2Q9Y2J4 779 aa17.36■□□□□ 0.37
GGA3-217ENST00000583667 KANK1Q14678 1352 aa17.36■□□□□ 0.37
GGA3-217ENST00000583667 DCCP43146 1447 aa17.36■□□□□ 0.37
GGA3-217ENST00000583667 MST1RQ04912 1400 aa17.36■□□□□ 0.37
GGA3-217ENST00000583667 PIK3R4Q99570 1358 aa17.35■□□□□ 0.37
GGA3-217ENST00000583667 ADAMTS13Q76LX8 1427 aa17.35■□□□□ 0.37
GGA3-217ENST00000583667 PSDA5PKW4 1024 aaPredicted RBP17.33■□□□□ 0.36
GGA3-217ENST00000583667 LMTK2Q8IWU2 1503 aa17.32■□□□□ 0.36
GGA3-217ENST00000583667 ERBINQ96RT1 1412 aa17.32■□□□□ 0.36
GGA3-217ENST00000583667 YY1P25490 414 aa17.32■□□□□ 0.36
GGA3-217ENST00000583667 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.31■□□□□ 0.36
GGA3-217ENST00000583667 GJD4Q96KN9 370 aaPredicted RBP17.31■□□□□ 0.36
GGA3-217ENST00000583667 PTCH1Q13635 1447 aa17.3■□□□□ 0.36
GGA3-217ENST00000583667 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
GGA3-217ENST00000583667 BCL9LQ86UU0 1499 aa17.3■□□□□ 0.36
GGA3-217ENST00000583667 SF3B2Q13435 895 aaKnown RBP17.28■□□□□ 0.36
GGA3-217ENST00000583667 IFFO2Q5TF58 517 aa17.28■□□□□ 0.36
GGA3-217ENST00000583667 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
GGA3-217ENST00000583667 ANKRD30BQ9BXX2 1392 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms