RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 AFF2P51816 1311 aa11.36□□□□□ -0.59
CTC1-211ENST00000583254 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
CTC1-211ENST00000583254 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
CTC1-211ENST00000583254 NUTM2AQ8IVF1 878 aaPredicted RBP11.36□□□□□ -0.59
CTC1-211ENST00000583254 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.35□□□□□ -0.59
CTC1-211ENST00000583254 BCANQ96GW7 911 aa11.35□□□□□ -0.59
CTC1-211ENST00000583254 IDI1Q13907 227 aa11.34□□□□□ -0.59
CTC1-211ENST00000583254 SETBP1Q9Y6X0 1596 aa11.33□□□□□ -0.6
CTC1-211ENST00000583254 MYO5BQ9ULV0 1848 aa11.33□□□□□ -0.6
CTC1-211ENST00000583254 NUTM2DQ5VT03 806 aaPredicted RBP11.33□□□□□ -0.6
CTC1-211ENST00000583254 C14orf37Q86TY3 774 aa11.32□□□□□ -0.6
CTC1-211ENST00000583254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.6
CTC1-211ENST00000583254 ERBINQ96RT1 1412 aa11.32□□□□□ -0.6
CTC1-211ENST00000583254 KIF15Q9NS87 1388 aa11.31□□□□□ -0.6
CTC1-211ENST00000583254 CROCC2H7BZ55 1655 aa11.31□□□□□ -0.6
CTC1-211ENST00000583254 PLEKHG1Q9ULL1 1385 aa11.3□□□□□ -0.6
CTC1-211ENST00000583254 ZFYVE9O95405 1425 aa11.3□□□□□ -0.6
CTC1-211ENST00000583254 NCOA3Q9Y6Q9 1424 aa11.3□□□□□ -0.6
CTC1-211ENST00000583254 GCC2Q8IWJ2 1684 aa11.3□□□□□ -0.6
CTC1-211ENST00000583254 LMTK2Q8IWU2 1503 aa11.3□□□□□ -0.6
CTC1-211ENST00000583254 EP400Q96L91 3159 aa11.29□□□□□ -0.6
CTC1-211ENST00000583254 NOS1P29475 1434 aa11.29□□□□□ -0.6
CTC1-211ENST00000583254 NHSL1Q5SYE7 1610 aa11.29□□□□□ -0.6
CTC1-211ENST00000583254 RBM6P78332 1123 aaKnown RBP11.29□□□□□ -0.6
CTC1-211ENST00000583254 BRINP3Q76B58 766 aa11.29□□□□□ -0.6
CTC1-211ENST00000583254 CADPS2Q86UW7 1296 aa11.29□□□□□ -0.6
CTC1-211ENST00000583254 C8orf37Q96NL8 207 aa11.29□□□□□ -0.6
CTC1-211ENST00000583254 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
CTC1-211ENST00000583254 ASXL1Q8IXJ9 1541 aa11.29□□□□□ -0.6
CTC1-211ENST00000583254 KANK1Q14678 1352 aa11.28□□□□□ -0.6
CTC1-211ENST00000583254 ATAD2Q6PL18 1390 aa11.28□□□□□ -0.6
CTC1-211ENST00000583254 ATF3P18847 181 aa11.28□□□□□ -0.6
CTC1-211ENST00000583254 QTRT2Q9H974 415 aaKnown RBP11.28□□□□□ -0.6
CTC1-211ENST00000583254 SETD5Q9C0A6 1442 aa11.27□□□□□ -0.6
CTC1-211ENST00000583254 RIMS2Q9UQ26 1411 aa11.27□□□□□ -0.6
CTC1-211ENST00000583254 PPP1R15AO75807 674 aaPredicted RBP11.27□□□□□ -0.61
CTC1-211ENST00000583254 RRP7BPQ9NSQ0 103 aa11.27□□□□□ -0.61
CTC1-211ENST00000583254 MYOM3Q5VTT5 1437 aa11.26□□□□□ -0.61
CTC1-211ENST00000583254 C19orf44Q9H6X5 657 aa11.26□□□□□ -0.61
CTC1-211ENST00000583254 ADAMTS13Q76LX8 1427 aa11.25□□□□□ -0.61
CTC1-211ENST00000583254 TMEM131LA2VDJ0 1609 aa11.24□□□□□ -0.61
CTC1-211ENST00000583254 FOXD1Q16676 465 aa11.24□□□□□ -0.61
CTC1-211ENST00000583254 PNPLA6Q8IY17 1366 aa11.24□□□□□ -0.61
CTC1-211ENST00000583254 SLC52A1Q9NWF4 448 aa11.23□□□□□ -0.61
CTC1-211ENST00000583254 TBX22Q9Y458 520 aa11.23□□□□□ -0.61
CTC1-211ENST00000583254 ABCC5O15440 1437 aa11.23□□□□□ -0.61
CTC1-211ENST00000583254 TRPM2O94759 1503 aa11.22□□□□□ -0.61
CTC1-211ENST00000583254 DCCP43146 1447 aa11.22□□□□□ -0.61
CTC1-211ENST00000583254 MST1RQ04912 1400 aa11.22□□□□□ -0.61
CTC1-211ENST00000583254 NGLY1Q96IV0 654 aa11.22□□□□□ -0.61
CTC1-211ENST00000583254 PTPRUQ92729 1446 aa11.21□□□□□ -0.61
CTC1-211ENST00000583254 ADAMTS2O95450 1211 aa11.21□□□□□ -0.61
CTC1-211ENST00000583254 DDX17Q92841 729 aaKnown RBP11.21□□□□□ -0.61
CTC1-211ENST00000583254 PIK3R4Q99570 1358 aa11.2□□□□□ -0.62
CTC1-211ENST00000583254 LRRC59Q96AG4 307 aaKnown RBP11.2□□□□□ -0.62
CTC1-211ENST00000583254 XRN1Q8IZH2 1706 aaKnown RBP11.2□□□□□ -0.62
CTC1-211ENST00000583254 LRP5O75197 1615 aa11.2□□□□□ -0.62
CTC1-211ENST00000583254 PTPN23Q9H3S7 1636 aa11.2□□□□□ -0.62
CTC1-211ENST00000583254 RPRD2Q5VT52 1461 aaKnown RBP11.19□□□□□ -0.62
CTC1-211ENST00000583254 DAPK1P53355 1430 aa11.19□□□□□ -0.62
CTC1-211ENST00000583254 ATRNO75882 1429 aa11.18□□□□□ -0.62
CTC1-211ENST00000583254 HDGFP51858 240 aaKnown RBP11.18□□□□□ -0.62
CTC1-211ENST00000583254 AMOTL2Q9Y2J4 779 aa11.18□□□□□ -0.62
CTC1-211ENST00000583254 UNC13BO14795 1591 aa11.18□□□□□ -0.62
CTC1-211ENST00000583254 CHGAP10645 457 aaKnown RBP11.17□□□□□ -0.62
CTC1-211ENST00000583254 KANK4Q5T7N3 995 aaPredicted RBP11.17□□□□□ -0.62
CTC1-211ENST00000583254 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.17□□□□□ -0.62
CTC1-211ENST00000583254 USP21Q9UK80 565 aa11.17□□□□□ -0.62
CTC1-211ENST00000583254 TRPC5Q9UL62 973 aaPredicted RBP11.17□□□□□ -0.62
CTC1-211ENST00000583254 NALCNQ8IZF0 1738 aa11.17□□□□□ -0.62
CTC1-211ENST00000583254 NRXN3Q9Y4C0 1643 aa11.16□□□□□ -0.62
CTC1-211ENST00000583254 ANKRD30AQ9BXX3 1397 aa11.16□□□□□ -0.62
CTC1-211ENST00000583254 CHIC2Q9UKJ5 165 aa11.15□□□□□ -0.62
CTC1-211ENST00000583254 LAMC1P11047 1609 aa11.14□□□□□ -0.63
CTC1-211ENST00000583254 CCDC125Q86Z20 511 aa11.14□□□□□ -0.63
CTC1-211ENST00000583254 ADGRL3Q9HAR2 1447 aa11.14□□□□□ -0.63
CTC1-211ENST00000583254 PTCH1Q13635 1447 aa11.13□□□□□ -0.63
CTC1-211ENST00000583254 VPS8Q8N3P4 1428 aa11.13□□□□□ -0.63
CTC1-211ENST00000583254 COL22A1Q8NFW1 1626 aaPredicted RBP11.13□□□□□ -0.63
CTC1-211ENST00000583254 E9PCH4 1651 aa11.12□□□□□ -0.63
CTC1-211ENST00000583254 FNBP4Q8N3X1 1017 aaPredicted RBP11.12□□□□□ -0.63
CTC1-211ENST00000583254 MARF1Q9Y4F3 1742 aaKnown RBP11.12□□□□□ -0.63
CTC1-211ENST00000583254 C1orf167Q5SNV9 1468 aa11.12□□□□□ -0.63
CTC1-211ENST00000583254 BLMP54132 1417 aaPredicted RBP11.11□□□□□ -0.63
CTC1-211ENST00000583254 DEFB132Q7Z7B7 95 aa11.11□□□□□ -0.63
CTC1-211ENST00000583254 BRWD3Q6RI45 1802 aa11.1□□□□□ -0.63
CTC1-211ENST00000583254 ADGRL2O95490 1459 aa11.1□□□□□ -0.63
CTC1-211ENST00000583254 BCL9LQ86UU0 1499 aa11.1□□□□□ -0.63
CTC1-211ENST00000583254 MYOM2P54296 1465 aa11.09□□□□□ -0.63
CTC1-211ENST00000583254 METP08581 1390 aa11.09□□□□□ -0.63
CTC1-211ENST00000583254 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.09□□□□□ -0.63
CTC1-211ENST00000583254 SOS2Q07890 1332 aaPredicted RBP11.09□□□□□ -0.63
CTC1-211ENST00000583254 GLI3P10071 1580 aa11.08□□□□□ -0.64
CTC1-211ENST00000583254 IQGAP3Q86VI3 1631 aa11.08□□□□□ -0.64
CTC1-211ENST00000583254 ANKRD50Q9ULJ7 1429 aa11.08□□□□□ -0.64
CTC1-211ENST00000583254 SPHKAPQ2M3C7 1700 aa11.07□□□□□ -0.64
CTC1-211ENST00000583254 GJD4Q96KN9 370 aaPredicted RBP11.07□□□□□ -0.64
CTC1-211ENST00000583254 RALGAPBQ86X10 1494 aa11.06□□□□□ -0.64
CTC1-211ENST00000583254 PSDA5PKW4 1024 aaPredicted RBP11.06□□□□□ -0.64
CTC1-211ENST00000583254 ORAI2Q96SN7 254 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms