RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 ITGBL1O95965 494 aaPredicted RBP10.42□□□□□ -0.74
COPS3-217ENST00000583160 IFFO2Q5TF58 517 aa10.42□□□□□ -0.74
COPS3-217ENST00000583160 APLP1P51693 650 aa10.41□□□□□ -0.74
COPS3-217ENST00000583160 SLC24A1O60721 1099 aa10.4□□□□□ -0.74
COPS3-217ENST00000583160 KCNC4Q03721 635 aa10.4□□□□□ -0.74
COPS3-217ENST00000583160 MAP2K5Q13163 448 aa10.39□□□□□ -0.75
COPS3-217ENST00000583160 PHOX2BQ99453 314 aa10.38□□□□□ -0.75
COPS3-217ENST00000583160 NLRP7Q8WX94 980 aa10.37□□□□□ -0.75
COPS3-217ENST00000583160 IRF6O14896 467 aa10.36□□□□□ -0.75
COPS3-217ENST00000583160 TJAP1Q5JTD0 557 aa10.36□□□□□ -0.75
COPS3-217ENST00000583160 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
COPS3-217ENST00000583160 MINK1Q8N4C8 1332 aaPredicted RBP10.35□□□□□ -0.75
COPS3-217ENST00000583160 SLC10A3P09131 477 aa10.35□□□□□ -0.75
COPS3-217ENST00000583160 MTRQ99707 1265 aa10.35□□□□□ -0.75
COPS3-217ENST00000583160 PRR14Q9BWN1 585 aa10.34□□□□□ -0.75
COPS3-217ENST00000583160 IL21Q9HBE4 155 aa10.34□□□□□ -0.75
COPS3-217ENST00000583160 A0A0G2JS52 829 aa10.33□□□□□ -0.76
COPS3-217ENST00000583160 KMT5BQ4FZB7 885 aa10.33□□□□□ -0.76
COPS3-217ENST00000583160 CFHP08603 1231 aa10.32□□□□□ -0.76
COPS3-217ENST00000583160 RSPH4AQ5TD94 716 aa10.32□□□□□ -0.76
COPS3-217ENST00000583160 ZC3H15Q8WU90 426 aaKnown RBP10.32□□□□□ -0.76
COPS3-217ENST00000583160 COPS2P61201 443 aa10.31□□□□□ -0.76
COPS3-217ENST00000583160 ZNF516Q92618 1163 aa10.31□□□□□ -0.76
COPS3-217ENST00000583160 CCDC102AQ96A19 550 aa10.31□□□□□ -0.76
COPS3-217ENST00000583160 PCDHB3Q9Y5E6 796 aa10.31□□□□□ -0.76
COPS3-217ENST00000583160 DDX11L8A8MPP1 907 aa10.3□□□□□ -0.76
COPS3-217ENST00000583160 ACTN4O43707 911 aaKnown RBP10.3□□□□□ -0.76
COPS3-217ENST00000583160 KRI1Q8N9T8 703 aaKnown RBP10.3□□□□□ -0.76
COPS3-217ENST00000583160 ZMYND10O75800 440 aa10.29□□□□□ -0.76
COPS3-217ENST00000583160 BARGINQ6ZT62 677 aa10.29□□□□□ -0.76
COPS3-217ENST00000583160 RDH13Q8NBN7 331 aa10.29□□□□□ -0.76
COPS3-217ENST00000583160 SULF1Q8IWU6 871 aa10.28□□□□□ -0.76
COPS3-217ENST00000583160 BLOC1S3Q6QNY0 202 aa10.27□□□□□ -0.77
COPS3-217ENST00000583160 ZPR1O75312 459 aa10.25□□□□□ -0.77
COPS3-217ENST00000583160 MDM2Q00987 491 aaPredicted RBP10.25□□□□□ -0.77
COPS3-217ENST00000583160 NKX2-3Q8TAU0 364 aa10.25□□□□□ -0.77
COPS3-217ENST00000583160 RGS20O76081 388 aa10.22□□□□□ -0.77
COPS3-217ENST00000583160 GCGRP47871 477 aa10.22□□□□□ -0.77
COPS3-217ENST00000583160 PUS10Q3MIT2 529 aaKnown RBP10.22□□□□□ -0.77
COPS3-217ENST00000583160 BCANQ96GW7 911 aa10.22□□□□□ -0.77
COPS3-217ENST00000583160 CLCN1P35523 988 aa10.2□□□□□ -0.78
COPS3-217ENST00000583160 FUT2Q10981 343 aa10.2□□□□□ -0.78
COPS3-217ENST00000583160 PPP1R18Q6NYC8 613 aa10.2□□□□□ -0.78
COPS3-217ENST00000583160 GPCPD1Q9NPB8 672 aa10.2□□□□□ -0.78
COPS3-217ENST00000583160 NR1I2O75469 434 aa10.19□□□□□ -0.78
COPS3-217ENST00000583160 CD46P15529 392 aa10.19□□□□□ -0.78
COPS3-217ENST00000583160 SCUBE3Q8IX30 993 aa10.19□□□□□ -0.78
COPS3-217ENST00000583160 TLL1O43897 1013 aa10.18□□□□□ -0.78
COPS3-217ENST00000583160 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
COPS3-217ENST00000583160 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.18□□□□□ -0.78
COPS3-217ENST00000583160 TMUB1Q9BVT8 246 aa10.17□□□□□ -0.78
COPS3-217ENST00000583160 MORN1Q5T089 497 aa10.16□□□□□ -0.78
COPS3-217ENST00000583160 REPIN1Q9BWE0 567 aaKnown RBP10.16□□□□□ -0.78
COPS3-217ENST00000583160 FAM217BQ9NTX9 383 aaPredicted RBP10.16□□□□□ -0.78
COPS3-217ENST00000583160 GGCXP38435 758 aa10.15□□□□□ -0.78
COPS3-217ENST00000583160 AMHR2Q16671 573 aa10.14□□□□□ -0.79
COPS3-217ENST00000583160 AK7Q96M32 723 aa10.14□□□□□ -0.79
COPS3-217ENST00000583160 TTLL12Q14166 644 aaPredicted RBP10.13□□□□□ -0.79
COPS3-217ENST00000583160 GRIPAP1Q4V328 841 aa10.13□□□□□ -0.79
COPS3-217ENST00000583160 SLC27A5Q9Y2P5 690 aa10.13□□□□□ -0.79
COPS3-217ENST00000583160 TRIM66O15016 1216 aa10.12□□□□□ -0.79
COPS3-217ENST00000583160 KDM4AO75164 1064 aa10.12□□□□□ -0.79
COPS3-217ENST00000583160 ADH1BP00325 375 aa10.12□□□□□ -0.79
COPS3-217ENST00000583160 SSTR3P32745 418 aaPredicted RBP10.12□□□□□ -0.79
COPS3-217ENST00000583160 SPSB2Q99619 263 aa10.11□□□□□ -0.79
COPS3-217ENST00000583160 SLC24A3Q9HC58 644 aa10.1□□□□□ -0.79
COPS3-217ENST00000583160 RNF223E7ERA6 249 aa10.09□□□□□ -0.79
COPS3-217ENST00000583160 S1PR4O95977 384 aa10.09□□□□□ -0.79
COPS3-217ENST00000583160 PRKD2Q9BZL6 878 aa10.09□□□□□ -0.79
COPS3-217ENST00000583160 SLC6A16Q9GZN6 736 aa10.09□□□□□ -0.79
COPS3-217ENST00000583160 FMNL1O95466 1100 aaPredicted RBP10.08□□□□□ -0.8
COPS3-217ENST00000583160 USP46P62068 366 aa10.08□□□□□ -0.8
COPS3-217ENST00000583160 GIGYF2Q6Y7W6 1299 aaKnown RBP10.08□□□□□ -0.8
COPS3-217ENST00000583160 THAP11Q96EK4 314 aa10.08□□□□□ -0.8
COPS3-217ENST00000583160 PPEF1O14829 653 aaPredicted RBP10.07□□□□□ -0.8
COPS3-217ENST00000583160 NUTM1Q86Y26 1132 aa10.07□□□□□ -0.8
COPS3-217ENST00000583160 SALL2Q9Y467 1007 aaPredicted RBP10.07□□□□□ -0.8
COPS3-217ENST00000583160 BRICD5Q6PL45 260 aa10.06□□□□□ -0.8
COPS3-217ENST00000583160 PARP9Q8IXQ6 854 aa10.06□□□□□ -0.8
COPS3-217ENST00000583160 RNF19BQ6ZMZ0 732 aa10.05□□□□□ -0.8
COPS3-217ENST00000583160 HLA-CQ95604 372 aa10.05□□□□□ -0.8
COPS3-217ENST00000583160 HOXA2O43364 376 aa10.04□□□□□ -0.8
COPS3-217ENST00000583160 PDE4DQ08499 809 aa10.04□□□□□ -0.8
COPS3-217ENST00000583160 FAM160A2Q8N612 972 aaPredicted RBP10.04□□□□□ -0.8
COPS3-217ENST00000583160 ANKLE1Q8NAG6 615 aa10.04□□□□□ -0.8
COPS3-217ENST00000583160 V9GY48 417 aaPredicted RBP10.04□□□□□ -0.8
COPS3-217ENST00000583160 Q3C1V9 767 aa10.03□□□□□ -0.8
COPS3-217ENST00000583160 IRX2Q9BZI1 471 aaPredicted RBP10.03□□□□□ -0.8
COPS3-217ENST00000583160 GUCA2AQ02747 115 aa10.02□□□□□ -0.81
COPS3-217ENST00000583160 BEGAINQ9BUH8 593 aa10.02□□□□□ -0.81
COPS3-217ENST00000583160 MS4A1P11836 297 aa10.01□□□□□ -0.81
COPS3-217ENST00000583160 SPIRE2Q8WWL2 714 aa10.01□□□□□ -0.81
COPS3-217ENST00000583160 SLC19A1P41440 591 aa9.99□□□□□ -0.81
COPS3-217ENST00000583160 EMID1Q96A84 441 aaPredicted RBP9.99□□□□□ -0.81
COPS3-217ENST00000583160 PRDM9Q9NQV7 894 aa9.99□□□□□ -0.81
COPS3-217ENST00000583160 MSS51Q4VC12 460 aa9.98□□□□□ -0.81
COPS3-217ENST00000583160 USB1Q9BQ65 265 aaKnown RBP9.98□□□□□ -0.81
COPS3-217ENST00000583160 FDX1P10109 184 aa9.97□□□□□ -0.81
COPS3-217ENST00000583160 PLA2G2CQ5R387 149 aa9.97□□□□□ -0.81
COPS3-217ENST00000583160 LIAT1Q6ZQX7 453 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms