RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 PLA2R1Q13018 1463 aa17.7■□□□□ 0.42
SNRPD1-204ENST00000582475 UGGT1Q9NYU2 1555 aa17.7■□□□□ 0.42
SNRPD1-204ENST00000582475 NCKAP5LQ9HCH0 1330 aa17.7■□□□□ 0.42
SNRPD1-204ENST00000582475 ANKLE2Q86XL3 938 aa17.69■□□□□ 0.42
SNRPD1-204ENST00000582475 ZBTB22O15209 634 aa17.68■□□□□ 0.42
SNRPD1-204ENST00000582475 TXNDC2Q86VQ3 553 aa17.66■□□□□ 0.42
SNRPD1-204ENST00000582475 ZNF142P52746 1687 aaPredicted RBP17.66■□□□□ 0.42
SNRPD1-204ENST00000582475 HDGFP51858 240 aaKnown RBP17.65■□□□□ 0.42
SNRPD1-204ENST00000582475 EID1Q9Y6B2 187 aa17.65■□□□□ 0.42
SNRPD1-204ENST00000582475 PIK3C2BO00750 1634 aa17.65■□□□□ 0.42
SNRPD1-204ENST00000582475 SPHKAPQ2M3C7 1700 aa17.64■□□□□ 0.41
SNRPD1-204ENST00000582475 TRPM2O94759 1503 aa17.63■□□□□ 0.41
SNRPD1-204ENST00000582475 LTKP29376 864 aa17.63■□□□□ 0.41
SNRPD1-204ENST00000582475 ZNF326Q5BKZ1 582 aaKnown RBP17.63■□□□□ 0.41
SNRPD1-204ENST00000582475 ANKRD30BQ9BXX2 1392 aa17.63■□□□□ 0.41
SNRPD1-204ENST00000582475 TMEM2Q9UHN6 1383 aa17.63■□□□□ 0.41
SNRPD1-204ENST00000582475 UBR1Q8IWV7 1749 aa17.62■□□□□ 0.41
SNRPD1-204ENST00000582475 CCDC144AA2RUR9 1427 aa17.62■□□□□ 0.41
SNRPD1-204ENST00000582475 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNRPD1-204ENST00000582475 ADGRB3O60242 1522 aa17.6■□□□□ 0.41
SNRPD1-204ENST00000582475 RGL3Q3MIN7 710 aa17.59■□□□□ 0.41
SNRPD1-204ENST00000582475 NUTM2DQ5VT03 806 aaPredicted RBP17.59■□□□□ 0.41
SNRPD1-204ENST00000582475 TMEM131LA2VDJ0 1609 aa17.58■□□□□ 0.41
SNRPD1-204ENST00000582475 CLTCL1P53675 1640 aa17.58■□□□□ 0.41
SNRPD1-204ENST00000582475 SLIT1O75093 1534 aa17.58■□□□□ 0.41
SNRPD1-204ENST00000582475 ARHGAP23Q9P227 1491 aa17.58■□□□□ 0.41
SNRPD1-204ENST00000582475 DHX57Q6P158 1386 aaKnown RBP17.58■□□□□ 0.4
SNRPD1-204ENST00000582475 STRCQ7RTU9 1775 aa17.58■□□□□ 0.4
SNRPD1-204ENST00000582475 KDM5AP29375 1690 aaKnown RBP17.58■□□□□ 0.4
SNRPD1-204ENST00000582475 RIMS2Q9UQ26 1411 aa17.57■□□□□ 0.4
SNRPD1-204ENST00000582475 RPGRIP1LQ68CZ1 1315 aa17.56■□□□□ 0.4
SNRPD1-204ENST00000582475 PPP1R15AO75807 674 aaPredicted RBP17.56■□□□□ 0.4
SNRPD1-204ENST00000582475 BCANQ96GW7 911 aa17.56■□□□□ 0.4
SNRPD1-204ENST00000582475 SCAF11Q99590 1463 aaKnown RBP17.54■□□□□ 0.4
SNRPD1-204ENST00000582475 NPHP4O75161 1426 aaPredicted RBP17.54■□□□□ 0.4
SNRPD1-204ENST00000582475 KIF1BO60333 1816 aa17.54■□□□□ 0.4
SNRPD1-204ENST00000582475 MYO5BQ9ULV0 1848 aa17.54■□□□□ 0.4
SNRPD1-204ENST00000582475 ZFYVE9O95405 1425 aa17.53■□□□□ 0.4
SNRPD1-204ENST00000582475 MED14O60244 1454 aa17.52■□□□□ 0.4
SNRPD1-204ENST00000582475 VGFO15240 615 aaPredicted RBP17.52■□□□□ 0.4
SNRPD1-204ENST00000582475 SIN3AQ96ST3 1273 aa17.52■□□□□ 0.4
SNRPD1-204ENST00000582475 ATF5Q9Y2D1 282 aaPredicted RBP17.52■□□□□ 0.4
SNRPD1-204ENST00000582475 SPATA31E1Q6ZUB1 1445 aa17.51■□□□□ 0.39
SNRPD1-204ENST00000582475 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
SNRPD1-204ENST00000582475 POLA2Q14181 598 aa17.49■□□□□ 0.39
SNRPD1-204ENST00000582475 SLC26A8Q96RN1 970 aa17.49■□□□□ 0.39
SNRPD1-204ENST00000582475 PLEKHG1Q9ULL1 1385 aa17.49■□□□□ 0.39
SNRPD1-204ENST00000582475 NEURL4Q96JN8 1562 aa17.49■□□□□ 0.39
SNRPD1-204ENST00000582475 POLR1AO95602 1720 aaPredicted RBP17.47■□□□□ 0.39
SNRPD1-204ENST00000582475 TBX22Q9Y458 520 aa17.47■□□□□ 0.39
SNRPD1-204ENST00000582475 DCAF11Q8TEB1 546 aa17.45■□□□□ 0.38
SNRPD1-204ENST00000582475 KDM2AQ9Y2K7 1162 aa17.45■□□□□ 0.38
SNRPD1-204ENST00000582475 ADGRF5Q8IZF2 1346 aa17.45■□□□□ 0.38
SNRPD1-204ENST00000582475 NEXMIFQ5QGS0 1516 aa17.44■□□□□ 0.38
SNRPD1-204ENST00000582475 ZNF335Q9H4Z2 1342 aaPredicted RBP17.44■□□□□ 0.38
SNRPD1-204ENST00000582475 STAC3Q96MF2 364 aa17.43■□□□□ 0.38
SNRPD1-204ENST00000582475 IQGAP1P46940 1657 aa17.42■□□□□ 0.38
SNRPD1-204ENST00000582475 CCER1Q8TC90 406 aaPredicted RBP17.41■□□□□ 0.38
SNRPD1-204ENST00000582475 KCNA6P17658 529 aa17.4■□□□□ 0.38
SNRPD1-204ENST00000582475 L3MBTL2Q969R5 705 aa17.4■□□□□ 0.38
SNRPD1-204ENST00000582475 ADAMTS13Q76LX8 1427 aa17.39■□□□□ 0.38
SNRPD1-204ENST00000582475 PPLO60437 1756 aa17.38■□□□□ 0.37
SNRPD1-204ENST00000582475 CLSPNQ9HAW4 1339 aa17.37■□□□□ 0.37
SNRPD1-204ENST00000582475 C14orf93Q9H972 538 aaKnown RBP17.36■□□□□ 0.37
SNRPD1-204ENST00000582475 CFAP70Q5T0N1 1121 aa17.35■□□□□ 0.37
SNRPD1-204ENST00000582475 CERKQ8TCT0 537 aa17.35■□□□□ 0.37
SNRPD1-204ENST00000582475 AMOTL2Q9Y2J4 779 aa17.35■□□□□ 0.37
SNRPD1-204ENST00000582475 METP08581 1390 aa17.34■□□□□ 0.37
SNRPD1-204ENST00000582475 PIK3R4Q99570 1358 aa17.34■□□□□ 0.37
SNRPD1-204ENST00000582475 SETBP1Q9Y6X0 1596 aa17.34■□□□□ 0.37
SNRPD1-204ENST00000582475 MYOM2P54296 1465 aa17.32■□□□□ 0.36
SNRPD1-204ENST00000582475 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
SNRPD1-204ENST00000582475 PROSER2Q86WR7 435 aaPredicted RBP17.32■□□□□ 0.36
SNRPD1-204ENST00000582475 IFT172Q9UG01 1749 aa17.32■□□□□ 0.36
SNRPD1-204ENST00000582475 LTBP4Q8N2S1 1624 aa17.32■□□□□ 0.36
SNRPD1-204ENST00000582475 PIK3C2GO75747 1445 aa17.31■□□□□ 0.36
SNRPD1-204ENST00000582475 TONSLQ96HA7 1378 aa17.31■□□□□ 0.36
SNRPD1-204ENST00000582475 ALKQ9UM73 1620 aa17.31■□□□□ 0.36
SNRPD1-204ENST00000582475 NRXN3Q9Y4C0 1643 aa17.31■□□□□ 0.36
SNRPD1-204ENST00000582475 NRXN1Q9ULB1 1477 aa17.31■□□□□ 0.36
SNRPD1-204ENST00000582475 DIP2AQ14689 1571 aa17.3■□□□□ 0.36
SNRPD1-204ENST00000582475 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
SNRPD1-204ENST00000582475 CPS1P31327 1500 aa17.28■□□□□ 0.36
SNRPD1-204ENST00000582475 RBM33Q96EV2 1170 aaKnown RBP17.28■□□□□ 0.36
SNRPD1-204ENST00000582475 STK26Q9P289 416 aa17.28■□□□□ 0.36
SNRPD1-204ENST00000582475 TIMELESSQ9UNS1 1208 aa17.27■□□□□ 0.36
SNRPD1-204ENST00000582475 CHD2O14647 1828 aaKnown RBP17.26■□□□□ 0.35
SNRPD1-204ENST00000582475 ATXN8OSP0DMR3 200 aa17.26■□□□□ 0.35
SNRPD1-204ENST00000582475 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
SNRPD1-204ENST00000582475 PRAG1Q86YV5 1406 aa17.24■□□□□ 0.35
SNRPD1-204ENST00000582475 NBPF1Q3BBV0 1214 aa17.24■□□□□ 0.35
SNRPD1-204ENST00000582475 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
SNRPD1-204ENST00000582475 LRRC7Q96NW7 1537 aa17.24■□□□□ 0.35
SNRPD1-204ENST00000582475 TMEM94Q12767 1356 aa17.24■□□□□ 0.35
SNRPD1-204ENST00000582475 LRPPRCP42704 1394 aaKnown RBP17.23■□□□□ 0.35
SNRPD1-204ENST00000582475 ABCC11Q96J66 1382 aa17.22■□□□□ 0.35
SNRPD1-204ENST00000582475 NWD1Q149M9 1564 aa17.22■□□□□ 0.35
SNRPD1-204ENST00000582475 NKTRP30414 1462 aaKnown RBP17.21■□□□□ 0.35
SNRPD1-204ENST00000582475 C14orf37Q86TY3 774 aa17.21■□□□□ 0.35
SNRPD1-204ENST00000582475 SIRT1Q96EB6 747 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms