RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 ZNF644Q9H582 1327 aaPredicted RBP10.52□□□□□ -0.73
TVP23C-208ENST00000581273 INO80Q9ULG1 1556 aaPredicted RBP10.52□□□□□ -0.73
TVP23C-208ENST00000581273 ADGBQ8N7X0 1667 aa10.51□□□□□ -0.73
TVP23C-208ENST00000581273 PLEKHH2Q8IVE3 1493 aa10.51□□□□□ -0.73
TVP23C-208ENST00000581273 DEPDC5O75140 1603 aa10.51□□□□□ -0.73
TVP23C-208ENST00000581273 FBXO31Q5XUX0 539 aaPredicted RBP10.5□□□□□ -0.73
TVP23C-208ENST00000581273 PLXNC1O60486 1568 aa10.5□□□□□ -0.73
TVP23C-208ENST00000581273 MTUS2Q5JR59 1369 aa10.5□□□□□ -0.73
TVP23C-208ENST00000581273 ATAD2Q6PL18 1390 aa10.5□□□□□ -0.73
TVP23C-208ENST00000581273 KIAA1107Q9UPP5 1409 aa10.5□□□□□ -0.73
TVP23C-208ENST00000581273 EP400Q96L91 3159 aa10.49□□□□□ -0.73
TVP23C-208ENST00000581273 AFF2P51816 1311 aa10.49□□□□□ -0.73
TVP23C-208ENST00000581273 CFAP65Q6ZU64 1925 aaKnown RBP10.48□□□□□ -0.73
TVP23C-208ENST00000581273 KIF3BO15066 747 aa10.48□□□□□ -0.73
TVP23C-208ENST00000581273 SPATA31A6Q5VVP1 1343 aa10.48□□□□□ -0.73
TVP23C-208ENST00000581273 FANCIQ9NVI1 1328 aa10.48□□□□□ -0.73
TVP23C-208ENST00000581273 PRKCSHP14314 528 aaPredicted RBP10.47□□□□□ -0.73
TVP23C-208ENST00000581273 THEMISQ8N1K5 641 aaPredicted RBP10.47□□□□□ -0.73
TVP23C-208ENST00000581273 TNRQ92752 1358 aa10.47□□□□□ -0.73
TVP23C-208ENST00000581273 ERICH6BQ5W0A0 696 aa10.46□□□□□ -0.73
TVP23C-208ENST00000581273 QTRT2Q9H974 415 aaKnown RBP10.46□□□□□ -0.73
TVP23C-208ENST00000581273 COL16A1Q07092 1604 aaPredicted RBP10.46□□□□□ -0.74
TVP23C-208ENST00000581273 TIAM1Q13009 1591 aa10.45□□□□□ -0.74
TVP23C-208ENST00000581273 WASHC2CQ9Y4E1 1318 aa10.45□□□□□ -0.74
TVP23C-208ENST00000581273 RBM6P78332 1123 aaKnown RBP10.45□□□□□ -0.74
TVP23C-208ENST00000581273 ZC3H13Q5T200 1668 aaKnown RBP10.44□□□□□ -0.74
TVP23C-208ENST00000581273 RBM19Q9Y4C8 960 aaKnown RBP10.44□□□□□ -0.74
TVP23C-208ENST00000581273 UGGT1Q9NYU2 1555 aa10.43□□□□□ -0.74
TVP23C-208ENST00000581273 TMEM94Q12767 1356 aa10.43□□□□□ -0.74
TVP23C-208ENST00000581273 DHX29Q7Z478 1369 aaKnown RBP10.43□□□□□ -0.74
TVP23C-208ENST00000581273 FAM135AQ9P2D6 1515 aa10.43□□□□□ -0.74
TVP23C-208ENST00000581273 MBD5Q9P267 1494 aa10.42□□□□□ -0.74
TVP23C-208ENST00000581273 PSDA5PKW4 1024 aaPredicted RBP10.41□□□□□ -0.74
TVP23C-208ENST00000581273 KDM5DQ9BY66 1539 aa10.41□□□□□ -0.74
TVP23C-208ENST00000581273 LRRC9Q6ZRR7 1453 aa10.41□□□□□ -0.74
TVP23C-208ENST00000581273 EHBP1L1Q8N3D4 1523 aa10.4□□□□□ -0.74
TVP23C-208ENST00000581273 PZPP20742 1482 aa10.4□□□□□ -0.74
TVP23C-208ENST00000581273 SHPRHQ149N8 1683 aa10.4□□□□□ -0.74
TVP23C-208ENST00000581273 RTEL1-TNFRSF6BF6WH68 1400 aa10.4□□□□□ -0.75
TVP23C-208ENST00000581273 FGD6Q6ZV73 1430 aa10.4□□□□□ -0.75
TVP23C-208ENST00000581273 MAP3K1Q13233 1512 aa10.39□□□□□ -0.75
TVP23C-208ENST00000581273 CCDC141Q6ZP82 1450 aa10.39□□□□□ -0.75
TVP23C-208ENST00000581273 SPDYE2BA6NHP3 402 aa10.39□□□□□ -0.75
TVP23C-208ENST00000581273 SPDYE6P0CI01 402 aa10.39□□□□□ -0.75
TVP23C-208ENST00000581273 SPDYE2Q495Y8 402 aa10.39□□□□□ -0.75
TVP23C-208ENST00000581273 SLAIN2Q9P270 581 aa10.39□□□□□ -0.75
TVP23C-208ENST00000581273 MIA2Q96PC5 1412 aa10.39□□□□□ -0.75
TVP23C-208ENST00000581273 CAMSAP2Q08AD1 1489 aa10.38□□□□□ -0.75
TVP23C-208ENST00000581273 TSPY4P0CV99 314 aa10.38□□□□□ -0.75
TVP23C-208ENST00000581273 TSPY10P0CW01 314 aa10.38□□□□□ -0.75
TVP23C-208ENST00000581273 DEFB132Q7Z7B7 95 aa10.38□□□□□ -0.75
TVP23C-208ENST00000581273 C8orf37Q96NL8 207 aa10.38□□□□□ -0.75
TVP23C-208ENST00000581273 FBXO3Q9UK99 471 aa10.38□□□□□ -0.75
TVP23C-208ENST00000581273 NHSL1Q5SYE7 1610 aa10.37□□□□□ -0.75
TVP23C-208ENST00000581273 CCER2I3L3R5 266 aa10.37□□□□□ -0.75
TVP23C-208ENST00000581273 VPS8Q8N3P4 1428 aa10.37□□□□□ -0.75
TVP23C-208ENST00000581273 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
TVP23C-208ENST00000581273 NCOA2Q15596 1464 aa10.36□□□□□ -0.75
TVP23C-208ENST00000581273 NLRP1Q9C000 1473 aa10.36□□□□□ -0.75
TVP23C-208ENST00000581273 PROSER2Q86WR7 435 aaPredicted RBP10.36□□□□□ -0.75
TVP23C-208ENST00000581273 CCDC125Q86Z20 511 aa10.36□□□□□ -0.75
TVP23C-208ENST00000581273 NGLY1Q96IV0 654 aa10.35□□□□□ -0.75
TVP23C-208ENST00000581273 CEP152O94986 1710 aa10.34□□□□□ -0.75
TVP23C-208ENST00000581273 RSPH4AQ5TD94 716 aa10.34□□□□□ -0.75
TVP23C-208ENST00000581273 CEP350Q5VT06 3117 aa10.34□□□□□ -0.75
TVP23C-208ENST00000581273 LTKP29376 864 aa10.33□□□□□ -0.76
TVP23C-208ENST00000581273 C1QTNF8P60827 252 aa10.33□□□□□ -0.76
TVP23C-208ENST00000581273 ZNF692Q9BU19 519 aaPredicted RBP10.33□□□□□ -0.76
TVP23C-208ENST00000581273 TIMELESSQ9UNS1 1208 aa10.33□□□□□ -0.76
TVP23C-208ENST00000581273 DHX57Q6P158 1386 aaKnown RBP10.33□□□□□ -0.76
TVP23C-208ENST00000581273 NWD1Q149M9 1564 aa10.33□□□□□ -0.76
TVP23C-208ENST00000581273 ABCC3O15438 1527 aa10.33□□□□□ -0.76
TVP23C-208ENST00000581273 ZNF784Q8NCA9 323 aaPredicted RBP10.32□□□□□ -0.76
TVP23C-208ENST00000581273 ARHGEF5Q12774 1597 aa10.31□□□□□ -0.76
TVP23C-208ENST00000581273 SCAF11Q99590 1463 aaKnown RBP10.31□□□□□ -0.76
TVP23C-208ENST00000581273 MSH6P52701 1360 aa10.31□□□□□ -0.76
TVP23C-208ENST00000581273 UBR1Q8IWV7 1749 aa10.31□□□□□ -0.76
TVP23C-208ENST00000581273 AMER1Q5JTC6 1135 aaPredicted RBP10.31□□□□□ -0.76
TVP23C-208ENST00000581273 TXNDC2Q86VQ3 553 aa10.31□□□□□ -0.76
TVP23C-208ENST00000581273 ERVK-7P63135 1459 aa10.3□□□□□ -0.76
TVP23C-208ENST00000581273 BCL9LQ86UU0 1499 aa10.3□□□□□ -0.76
TVP23C-208ENST00000581273 DIP2AQ14689 1571 aa10.3□□□□□ -0.76
TVP23C-208ENST00000581273 STAG3Q9UJ98 1225 aa10.29□□□□□ -0.76
TVP23C-208ENST00000581273 EID1Q9Y6B2 187 aa10.29□□□□□ -0.76
TVP23C-208ENST00000581273 AHDC1Q5TGY3 1603 aaPredicted RBP10.29□□□□□ -0.76
TVP23C-208ENST00000581273 KCNA6P17658 529 aa10.28□□□□□ -0.76
TVP23C-208ENST00000581273 PRDM15P57071 1507 aaPredicted RBP10.28□□□□□ -0.76
TVP23C-208ENST00000581273 BLMP54132 1417 aaPredicted RBP10.27□□□□□ -0.77
TVP23C-208ENST00000581273 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
TVP23C-208ENST00000581273 RRP7BPQ9NSQ0 103 aa10.27□□□□□ -0.77
TVP23C-208ENST00000581273 MROH1Q8NDA8 1641 aa10.26□□□□□ -0.77
TVP23C-208ENST00000581273 EIF2AK4Q9P2K8 1649 aaKnown RBP10.26□□□□□ -0.77
TVP23C-208ENST00000581273 ADAMTS2O95450 1211 aa10.26□□□□□ -0.77
TVP23C-208ENST00000581273 DEKP35659 375 aaKnown RBP10.26□□□□□ -0.77
TVP23C-208ENST00000581273 BCANQ96GW7 911 aa10.26□□□□□ -0.77
TVP23C-208ENST00000581273 MAST1Q9Y2H9 1570 aa10.26□□□□□ -0.77
TVP23C-208ENST00000581273 KDM5AP29375 1690 aaKnown RBP10.25□□□□□ -0.77
TVP23C-208ENST00000581273 ANP32CO43423 234 aa10.25□□□□□ -0.77
TVP23C-208ENST00000581273 KANK4Q5T7N3 995 aaPredicted RBP10.25□□□□□ -0.77
TVP23C-208ENST00000581273 USP21Q9UK80 565 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms