RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 TRIM52Q96A61 297 aa12.63□□□□□ -0.39
SMARCE1-217ENST00000580654 MTUS2Q5JR59 1369 aa12.63□□□□□ -0.39
SMARCE1-217ENST00000580654 CAMSAP2Q08AD1 1489 aa12.62□□□□□ -0.39
SMARCE1-217ENST00000580654 PIK3C2BO00750 1634 aa12.62□□□□□ -0.39
SMARCE1-217ENST00000580654 TET3O43151 1660 aa12.61□□□□□ -0.39
SMARCE1-217ENST00000580654 EIF2AK4Q9P2K8 1649 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-217ENST00000580654 PRDM15P57071 1507 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-217ENST00000580654 EHBP1L1Q8N3D4 1523 aa12.61□□□□□ -0.39
SMARCE1-217ENST00000580654 NWD1Q149M9 1564 aa12.6□□□□□ -0.39
SMARCE1-217ENST00000580654 ARHGEF5Q12774 1597 aa12.6□□□□□ -0.39
SMARCE1-217ENST00000580654 KCNA6P17658 529 aa12.59□□□□□ -0.39
SMARCE1-217ENST00000580654 CEP162Q5TB80 1403 aa12.59□□□□□ -0.39
SMARCE1-217ENST00000580654 PROSER2Q86WR7 435 aaPredicted RBP12.58□□□□□ -0.4
SMARCE1-217ENST00000580654 SHPRHQ149N8 1683 aa12.57□□□□□ -0.4
SMARCE1-217ENST00000580654 TMEM2Q9UHN6 1383 aa12.57□□□□□ -0.4
SMARCE1-217ENST00000580654 ZNF772Q68DY9 489 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-217ENST00000580654 SLAIN2Q9P270 581 aa12.57□□□□□ -0.4
SMARCE1-217ENST00000580654 NKTRP30414 1462 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-217ENST00000580654 CDK12Q9NYV4 1490 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-217ENST00000580654 MAST1Q9Y2H9 1570 aa12.56□□□□□ -0.4
SMARCE1-217ENST00000580654 FGD6Q6ZV73 1430 aa12.56□□□□□ -0.4
SMARCE1-217ENST00000580654 RSPH4AQ5TD94 716 aa12.56□□□□□ -0.4
SMARCE1-217ENST00000580654 EID1Q9Y6B2 187 aa12.56□□□□□ -0.4
SMARCE1-217ENST00000580654 KDM5AP29375 1690 aaKnown RBP12.56□□□□□ -0.4
SMARCE1-217ENST00000580654 SPATA31A6Q5VVP1 1343 aa12.56□□□□□ -0.4
SMARCE1-217ENST00000580654 SLC26A8Q96RN1 970 aa12.55□□□□□ -0.4
SMARCE1-217ENST00000580654 MSH6P52701 1360 aa12.55□□□□□ -0.4
SMARCE1-217ENST00000580654 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
SMARCE1-217ENST00000580654 RXRBP28702 533 aa12.54□□□□□ -0.4
SMARCE1-217ENST00000580654 CHD2O14647 1828 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-217ENST00000580654 EFCAB6Q5THR3 1501 aa12.53□□□□□ -0.4
SMARCE1-217ENST00000580654 AHDC1Q5TGY3 1603 aaPredicted RBP12.53□□□□□ -0.4
SMARCE1-217ENST00000580654 MEX3CQ5U5Q3 659 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-217ENST00000580654 ATF5Q9Y2D1 282 aaPredicted RBP12.53□□□□□ -0.4
SMARCE1-217ENST00000580654 DIP2AQ14689 1571 aa12.52□□□□□ -0.4
SMARCE1-217ENST00000580654 EVX2Q03828 476 aa12.52□□□□□ -0.41
SMARCE1-217ENST00000580654 TSPY4P0CV99 314 aa12.51□□□□□ -0.41
SMARCE1-217ENST00000580654 TSPY10P0CW01 314 aa12.51□□□□□ -0.41
SMARCE1-217ENST00000580654 RGS12O14924 1447 aa12.51□□□□□ -0.41
SMARCE1-217ENST00000580654 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-217ENST00000580654 SETBP1Q9Y6X0 1596 aa12.48□□□□□ -0.41
SMARCE1-217ENST00000580654 IDI1Q13907 227 aa12.48□□□□□ -0.41
SMARCE1-217ENST00000580654 DUOX2Q9NRD8 1548 aa12.47□□□□□ -0.41
SMARCE1-217ENST00000580654 AFF2P51816 1311 aa12.47□□□□□ -0.41
SMARCE1-217ENST00000580654 ADGRB3O60242 1522 aa12.47□□□□□ -0.41
SMARCE1-217ENST00000580654 MYO5BQ9ULV0 1848 aa12.46□□□□□ -0.42
SMARCE1-217ENST00000580654 NUTM2BA6NNL0 878 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-217ENST00000580654 NUTM2EB1AL46 878 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-217ENST00000580654 NUTM2AQ8IVF1 878 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-217ENST00000580654 STAG3Q9UJ98 1225 aa12.45□□□□□ -0.42
SMARCE1-217ENST00000580654 NCOA3Q9Y6Q9 1424 aa12.44□□□□□ -0.42
SMARCE1-217ENST00000580654 NHSL1Q5SYE7 1610 aa12.42□□□□□ -0.42
SMARCE1-217ENST00000580654 ZFYVE9O95405 1425 aa12.42□□□□□ -0.42
SMARCE1-217ENST00000580654 NOS1P29475 1434 aa12.42□□□□□ -0.42
SMARCE1-217ENST00000580654 LMTK2Q8IWU2 1503 aa12.42□□□□□ -0.42
SMARCE1-217ENST00000580654 RBM6P78332 1123 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-217ENST00000580654 NUTM2DQ5VT03 806 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-217ENST00000580654 QTRT2Q9H974 415 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-217ENST00000580654 PLEKHG1Q9ULL1 1385 aa12.41□□□□□ -0.42
SMARCE1-217ENST00000580654 ERBINQ96RT1 1412 aa12.4□□□□□ -0.42
SMARCE1-217ENST00000580654 SETD5Q9C0A6 1442 aa12.4□□□□□ -0.42
SMARCE1-217ENST00000580654 BRINP3Q76B58 766 aa12.4□□□□□ -0.42
SMARCE1-217ENST00000580654 CROCC2H7BZ55 1655 aa12.4□□□□□ -0.42
SMARCE1-217ENST00000580654 ASXL1Q8IXJ9 1541 aa12.39□□□□□ -0.43
SMARCE1-217ENST00000580654 CADPS2Q86UW7 1296 aa12.39□□□□□ -0.43
SMARCE1-217ENST00000580654 BCANQ96GW7 911 aa12.39□□□□□ -0.43
SMARCE1-217ENST00000580654 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
SMARCE1-217ENST00000580654 KIF15Q9NS87 1388 aa12.39□□□□□ -0.43
SMARCE1-217ENST00000580654 GCC2Q8IWJ2 1684 aa12.38□□□□□ -0.43
SMARCE1-217ENST00000580654 C8orf37Q96NL8 207 aa12.38□□□□□ -0.43
SMARCE1-217ENST00000580654 C19orf44Q9H6X5 657 aa12.38□□□□□ -0.43
SMARCE1-217ENST00000580654 ATAD2Q6PL18 1390 aa12.38□□□□□ -0.43
SMARCE1-217ENST00000580654 ADAMTS13Q76LX8 1427 aa12.37□□□□□ -0.43
SMARCE1-217ENST00000580654 TMEM131LA2VDJ0 1609 aa12.37□□□□□ -0.43
SMARCE1-217ENST00000580654 ATF3P18847 181 aa12.36□□□□□ -0.43
SMARCE1-217ENST00000580654 C14orf37Q86TY3 774 aa12.36□□□□□ -0.43
SMARCE1-217ENST00000580654 TBX22Q9Y458 520 aa12.36□□□□□ -0.43
SMARCE1-217ENST00000580654 RIMS2Q9UQ26 1411 aa12.36□□□□□ -0.43
SMARCE1-217ENST00000580654 EP400Q96L91 3159 aa12.35□□□□□ -0.43
SMARCE1-217ENST00000580654 PNPLA6Q8IY17 1366 aa12.35□□□□□ -0.43
SMARCE1-217ENST00000580654 RRP7BPQ9NSQ0 103 aa12.35□□□□□ -0.43
SMARCE1-217ENST00000580654 FOXD4L1Q9NU39 408 aa12.35□□□□□ -0.43
SMARCE1-217ENST00000580654 MYOM3Q5VTT5 1437 aa12.35□□□□□ -0.43
SMARCE1-217ENST00000580654 ABCC5O15440 1437 aa12.34□□□□□ -0.43
SMARCE1-217ENST00000580654 MST1RQ04912 1400 aa12.34□□□□□ -0.43
SMARCE1-217ENST00000580654 KANK1Q14678 1352 aa12.33□□□□□ -0.44
SMARCE1-217ENST00000580654 SLC52A1Q9NWF4 448 aa12.33□□□□□ -0.44
SMARCE1-217ENST00000580654 PTPRUQ92729 1446 aa12.33□□□□□ -0.44
SMARCE1-217ENST00000580654 DCCP43146 1447 aa12.32□□□□□ -0.44
SMARCE1-217ENST00000580654 DDX17Q92841 729 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-217ENST00000580654 LRP5O75197 1615 aa12.32□□□□□ -0.44
SMARCE1-217ENST00000580654 LRRC59Q96AG4 307 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-217ENST00000580654 NGLY1Q96IV0 654 aa12.31□□□□□ -0.44
SMARCE1-217ENST00000580654 XRN1Q8IZH2 1706 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-217ENST00000580654 PIK3R4Q99570 1358 aa12.3□□□□□ -0.44
SMARCE1-217ENST00000580654 PPP1R15AO75807 674 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-217ENST00000580654 TRPM2O94759 1503 aa12.3□□□□□ -0.44
SMARCE1-217ENST00000580654 ATRNO75882 1429 aa12.29□□□□□ -0.44
SMARCE1-217ENST00000580654 ADAMTS2O95450 1211 aa12.29□□□□□ -0.44
SMARCE1-217ENST00000580654 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms